CSIRO Publishing blank image blank image blank image blank imageBooksblank image blank image blank image blank imageJournalsblank image blank image blank image blank imageAbout Usblank image blank image blank image blank imageShopping Cartblank image blank image blank image You are here: Journals > Australian Journal of Chemistry   
Australian Journal of Chemistry
Journal Banner
  An international journal for chemical science
 
blank image Search
 
blank image blank image
blank image
 
  Advanced Search
   

Journal Home
About the Journal
Editorial Board
Contacts
For Advertisers
Content
Online Early
Current Issue
Just Accepted
All Issues
Virtual Issues
Special Issues
Research Fronts
Sample Issue
Covers
For Authors
General Information
Notice to Authors
Submit Article
Open Access
For Referees
Referee Guidelines
Review Article
For Subscribers
Subscription Prices
Customer Service
Print Publication Dates

blue arrow e-Alerts
blank image
Subscribe to our Email Alert or RSS feeds for the latest journal papers.

red arrow Connect with us
blank image
facebook   youtube

Affiliated with RACI

Royal Australian Chemical Institute
Royal Australian
Chemical Institute


 

Article << Previous     |     Next >>   Contents Vol 65(5)

Characterisation of Calmodulin Structural Transitions by Ion Mobility Mass Spectrometry

Antonio N. Calabrese A, Lauren A. Speechley A and Tara L. Pukala A B

A School of Chemistry & Physics, The University of Adelaide, Adelaide, SA 5005, Australia.
B Corresponding author. Email: tara.pukala@adelaide.edu.au

Australian Journal of Chemistry 65(5) 504-511 http://dx.doi.org/10.1071/CH12047
Submitted: 27 January 2012  Accepted: 7 April 2012   Published: 8 May 2012


 
PDF (570 KB) $25
 Export Citation
 Print
  
Abstract

This study demonstrates the ability of travelling wave ion mobility-mass spectrometry to measure collision cross-sections of ions in the negative mode, using a calibration based approach. Here, negative mode ion mobility-mass spectrometry was utilised to understand structural transitions of calmodulin upon Ca2+ binding and complexation with model peptides melittin and the plasma membrane Ca2+ pump C20W peptide. Coexisting calmodulin conformers were distinguished on the basis of their mass and cross-section, and identified as relatively folded and unfolded populations, with good agreement in collision cross-section to known calmodulin geometries. Titration of calcium tartrate to physiologically relevant Ca2+ levels provided evidence for intermediately metalated species during the transition from apo- to holo-calmodulin, with collision cross-section measurements indicating that higher Ca2+ occupancy is correlated with more compact structures. The binding of two representative peptides which exemplify canonical compact (melittin) and extended (C20W) peptide-calmodulin binding models has also been interrogated by ion mobility mass spectrometry. Peptide binding to calmodulin involves intermediates with metalation states from 1–4 Ca2+, which demonstrate relatively collapsed structures, suggesting neither the existence of holo-calmodulin or a pre-folded calmodulin conformation is a prerequisite for binding target peptides or proteins. The biological importance of the different metal unsaturated calmodulin complexes, if any, is yet to be understood.





References

[1]  A. Catalano, D. H. O’Day, Cell. Signal. 2008, 20, 277.
         | CrossRef | CAS |

[2]  K. P. Lu, A. R. Means, Endocr. Rev. 1993, 14, 40.
         | CAS |

[3]  A. Ravindran, Q. Z. Lao, J. B. Harry, P. Abrahimi, E. Kobrinsky, N. M. Soldatov, Proc. Natl. Acad. Sci. USA 2008, 105, 8154.
         | CrossRef | CAS |

[4]  J. D. Johnson, J. S. Mills, Med. Res. Rev. 1986, 6, 341.
         | CrossRef | CAS |

[5]  Calmodulin and Cell Functions 1980 (Eds D. M. Watterson, F. F. Vincenzi) (New York Academy of Sciences: New York, NY).

[6]  A. R. Means, J. S. Tash, J. G. Chafouleas, Physiol. Rev. 1982, 62, 1.
         | CAS |

[7]  W. J. Chazin, Nat. Struct. Biol. 1995, 2, 707.
         | CrossRef | CAS |

[8]  H. Kuboniwa, N. Tjandra, S. Grzesiek, H. Ren, C. B. Klee, A. Bax, Nat. Struct. Biol. 1995, 2, 768.
         | CrossRef | CAS |

[9]  M. Zhang, T. Tanaka, M. Ikura, Nat. Struct. Biol. 1995, 2, 758.
         | CrossRef | CAS |

[10]  G. Barbato, M. Ikura, L. E. Kay, R. W. Pastor, A. Bax, Biochemistry – US 1992, 31, 5269.
         | CrossRef | CAS |

[11]  R. Chattopadhyaya, W. E. Meador, A. R. Means, F. A. Quiocho, J. Mol. Biol. 1992, 228, 1177.
         | CrossRef | CAS |

[12]  M. Ikura, G. M. Clore, A. M. Gronenborn, G. Zhu, C. B. Klee, A. Bax, Science 1992, 256, 632.
         | CrossRef | CAS |

[13]  S. W. Vetter, E. Leclerc, Eur. J. Biochem. 2003, 270, 404.
         | CrossRef | CAS |

[14]  A. R. Rhoads, F. Friedberg, FASEB J. 1997, 11, 331.
         | CAS |

[15]  M. Aoyagi, A. S. Arvai, J. A. Tainer, E. D. Getzoff, EMBO J. 2003, 22, 766.
         | CrossRef | CAS |

[16]  B. Elshorst, M. Hennig, H. Forsterling, A. Diener, M. Maurer, P. Schulte, H. Schwalbe, C. Griesinger, J. Krebs, H. Schmid, T. Vorherr, E. Carafoli, Biochemistry – US 1999, 38, 12320.
         | CrossRef | CAS |

[17]  C. Y. Huang, V. Chau, P. B. Chock, J. H. Wang, R. K. Sharma, Proc. Natl. Acad. Sci. USA 1981, 78, 871.
         | CrossRef | CAS |

[18]  Y. Maulet, J. A. Cox, Biochemistry – US 1983, 22, 5680.
         | CrossRef | CAS |

[19]  C. B. Klee, Interaction of Calmodulin with Ca2+ and Target Proteins, in Calmodulin 1988, pp. 35–56 (Eds P. Cohen, C. B. Klee) (Elsevier: New York, NY).

[20]  J. M. Shifman, M. H. Choi, S. Mihalas, S. L. Mayo, M. B. Kennedy, Proc. Natl. Acad. Sci. USA 2006, 103, 13968.
         | CrossRef | CAS |

[21]  T. J. Hill, D. Lafitte, J. I. Wallace, H. J. Cooper, P. O. Tsvetkov, P. J. Derrick, Biochemistry – US 2000, 39, 7284.
         | CrossRef | CAS |

[22]  H. Y. Park, S. A. Kim, J. Korlach, E. Rhoades, L. W. Kwok, W. R. Zipfel, M. N. Waxham, W. W. Webb, L. Pollack, Proc. Natl. Acad. Sci. USA 2008, 105, 542.
         | CrossRef | CAS |

[23]  M. A. Schumacher, A. F. Rivard, H. P. Bachinger, J. P. Adelman, Nature 2001, 410, 1120.
         | CrossRef | CAS |

[24]  J. Pan, L. Konermann, Biochemistry – US 2010, 49, 3477.
         | CrossRef | CAS |

[25]  J. B. Sperry, R. Y. Huang, M. M. Zhu, D. L. Rempel, M. L. Gross, Int. J. Mass Spectrom. Ion Process. 2011, 302, 85.
         | CAS |

[26]  K. Dimova, S. Kalkhof, I. Pottratz, C. Ihling, F. Rodriguez-Castaneda, T. Liepold, C. Griesinger, N. Brose, A. Sinz, O. Jahn, Biochemistry – US 2009, 48, 5908.
         | CrossRef | CAS |

[27]  T. Ly, R. R. Julian, J. Am. Soc. Mass Spectrom. 2008, 19, 1663.
         | CrossRef | CAS |

[28]  J. W. Wong, S. D. Maleknia, K. M. Downard, J. Am. Soc. Mass Spectrom. 2005, 16, 225.
         | CrossRef | CAS |

[29]  O. Nemirovskiy, D. E. Giblin, M. L. Gross, J. Am. Soc. Mass Spectrom. 1999, 10, 711.
         | CrossRef | CAS |

[30]  T. L. Pukala, T. Urathamakul, S. J. Watt, J. L. Beck, R. J. Jackway, J. H. Bowie, Rapid Commun. Mass Spectrom. 2008, 22, 3501.
         | CrossRef | CAS |

[31]  T. Wyttenbach, M. Grabenauer, K. Thalassinos, J. H. Scrivens, M. T. Bowers, J. Phys. Chem. B 2010, 114, 437.
         | CrossRef | CAS |

[32]  P. A. Faull, K. E. Korkeila, J. M. Kalapothakis, A. Gray, B. J. McCullough, P. E. Barran, Int. J. Mass Spectrom. 2009, 283, 140.
         | CrossRef | CAS |

[33]  S. D. Pringle, K. Giles, J. L. Wildgoose, J. P. Williams, S. E. Slade, K. Thalassinos, R. H. Bateman, M. T. Bowers, J. H. Scrivens, Int. J. Mass Spectrom. 2007, 261, 1.
         | CrossRef | CAS |

[34]  J. Wildgoose, T. McKenna, C. Hughes, K. Giles, S. Pringle, I. Campuzano, J. Langridge, R. H. Bateman, Mol. Cell. Proteomics 2006, 5, S14.

[35]  B. T. Ruotolo, J. L. Benesch, A. M. Sandercock, S. J. Hyung, C. V. Robinson, Nat. Protoc. 2008, 3, 1139.
         | CrossRef | CAS |

[36]  A. A. Shvartsburg, R. D. Smith, Anal. Chem. 2008, 80, 9689.
         | CrossRef | CAS |

[37]  T. H. Crouch, C. B. Klee, Biochemistry – US 1980, 19, 3692.
         | CrossRef | CAS |

[38]  C. A. Scarff, K. Thalassinos, G. R. Hilton, J. H. Scrivens, Rapid Commun. Mass Spectrom. 2008, 22, 3297.
         | CrossRef | CAS |

[39]  K. Thalassinos, M. Grabenauer, S. E. Slade, G. R. Hilton, M. T. Bowers, J. H. Scrivens, Anal. Chem. 2009, 81, 248.
         | CrossRef | CAS |

[40]  D. E. Clemmer, Clemmer Collision Cross-Section Database (accessed 20 January 2012). Available from: http://www.indiana.edu/~clemmer/

[41]  M. F. Mesleh, J. M. Hunter, A. A. Shvartsburg, G. C. Schatz, M. F. Jarrold, J. Phys. Chem. 1996, 100, 16082.
         | CrossRef | CAS |

[42]  A. A. Shvartsburg, M. F. Jarrold, Chem. Phys. Lett. 1996, 261, 86.
         | CrossRef | CAS |

[43]  P. Hu, Q. Z. Ye, J. A. Loo, Anal. Chem. 1994, 66, 4190.
         | CrossRef | CAS |

[44]  J. Pan, K. Xu, X. Yang, W. Y. Choy, L. Konermann, Anal. Chem. 2009, 81, 5008.
         | CrossRef | CAS |

[45]  U. A. Mirza, S. L. Cohen, B. T. Chait, Anal. Chem. 1993, 65, 1.
         | CrossRef | CAS |

[46]  I. A. Kaltashov, R. R. Abzalimov, J. Am. Soc. Mass Spectrom. 2008, 19, 1239.
         | CrossRef | CAS |

[47]  I. A. Kaltashov, A. Mohimen, Anal. Chem. 2005, 77, 5370.
         | CrossRef | CAS |

[48]  O. Nemirovskiy, R. Ramanathan, M. Gross, J. Am. Soc. Mass Spectrom. 1997, 8, 809.
         | CrossRef | CAS |

[49]  P. L. Wintrode, P. L. Privalov, J. Mol. Biol. 1997, 266, 1050.
         | CrossRef | CAS |

[50]  E. Jurneczko, P. E. Barran, Analyst (Lond.) 2011, 136, 20.
         | CrossRef | CAS |

[51]  J. L. Fallon, F. A. Quiocho, Structure 2003, 11, 1303.
         | CrossRef | CAS |

[52]  P. Novak, V. Havlicek, P. J. Derrick, K. A. Beran, S. Bashir, A. E. Giannakopulos, Eur. J. Mass Spectrom. (Chichester, Eng.) 2007, 13, 281.
         | CrossRef | CAS |

[53]  T. Otosu, E. Nishimoto, S. Yamashita, J. Biochem. 2007, 142, 655.
         | CrossRef | CAS |

[54]  D. M. Schulz, C. Ihling, G. M. Clore, A. Sinz, Biochemistry – US 2004, 43, 4703.
         | CrossRef | CAS |

[55]  A. Scaloni, N. Miraglia, S. Orru, P. Amodeo, A. Motta, G. Marino, P. Pucci, J. Mol. Biol. 1998, 277, 945.
         | CrossRef | CAS |

[56]  R. F. Steiner, S. Albaugh, C. Fenselau, C. Murphy, M. Vestling, Anal. Biochem. 1991, 196, 120.
         | CrossRef | CAS |

[57]  S. H. Seeholzer, M. Cohn, J. A. Putkey, A. R. Means, H. L. Crespi, Proc. Natl. Acad. Sci. USA 1986, 83, 3634.
         | CrossRef | CAS |

[58]  C. G. Caday, R. F. Steiner, Biochem. Biophys. Res. Commun. 1986, 135, 419.
         | CrossRef | CAS |

[59]  M. Kataoka, J. F. Head, B. A. Seaton, D. M. Engelman, Proc. Natl. Acad. Sci. USA 1989, 86, 6944.
         | CrossRef | CAS |

[60]  J. Gsponer, J. Christodoulou, A. Cavalli, J. M. Bui, B. Richter, C. M. Dobson, M. Vendruscolo, Structure 2008, 16, 736.
         | CrossRef | CAS |

[61]  J. L. Benesch, C. V. Robinson, Curr. Opin. Struct. Biol. 2006, 16, 245.
         | CrossRef | CAS |

[62]  B. T. Ruotolo, K. Giles, I. Campuzano, A. M. Sandercock, R. H. Bateman, C. V. Robinson, Science 2005, 310, 1658.
         | CrossRef | CAS |

[63]  C. Uetrecht, C. Versluis, N. R. Watts, W. H. Roos, G. J. Wuite, P. T. Wingfield, A. C. Steven, A. J. Heck, Proc. Natl. Acad. Sci. USA 2008, 105, 9216.
         | CrossRef | CAS |

[64]  T. L. Pukala, B. T. Ruotolo, M. Zhou, A. Politis, R. Stefanescu, J. A. Leary, C. V. Robinson, Structure 2009, 17, 1235.
         | CrossRef | CAS |


   
Subscriber Login
Username:
Password:  

 


    
Legal & Privacy | Contact Us | Help

CSIRO

© CSIRO 1996-2013