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Australian Journal of Botany Australian Journal of Botany Society
Southern hemisphere botanical ecosystems
RESEARCH ARTICLE

Endangered wild populations of endemic Calanthe orchids on an isolated Japanese island tested for viruses

Kiyohisa Kawakami A , Shin-ichi Fuji B and Kazumitsu Miyoshi A B C
+ Author Affiliations
- Author Affiliations

A Graduate School of Bioresource Sciences, Akita Prefectural University, 241-438 Shimoshinjo Nakano Kaidohatanishi, Akita City 010-0195, Japan.

B Faculty of Bioresource Sciences, Akita Prefectural University, 241-438 Shimoshinjo Nakano Kaidohatanishi, Akita City 010-0195, Japan.

C Corresponding author. Email: mi_orchids@akita-pu.ac.jp

Australian Journal of Botany 55(8) 831-836 https://doi.org/10.1071/BT07093
Submitted: 20 May 2007  Accepted: 3 September 2007   Published: 14 December 2007

Abstract

Leaf samples of endangered endemic orchid Calanthe izu-insularis Ohwi & Satomi collected at the time of full-bloom from two natural habitats on Mikurajima Island on (33°50′N, 139°37′E), ~200 km south of Tokyo, Japan, were examined for nine species of virus. Cucumber mosaic virus (CMV) was detected by reverse transcriptase–polymerase chain reaction (RT–PCR) and hybridisation in 4 of the 104 leaf samples from different plants of C. izu-insularis. Five plants were removed from their natural habitat and cultivated in a greenhouse. Concentrations of detectable CMV in these plants increased and CMV was detected in all five plants after 2 weeks of cultivation. However, after an additional 10 weeks of cultivation, CMV was not detected in any of the plants. Thus, it seems possible that almost all of the plants of this species in their natural habitat might harbour CMV at concentrations that are lower than the limit of detection by RT–PCR and hybridisation. The importance of these results for the conservation in situ is discussed.


Acknowledgements

The authors thank the office staff in Mikurajima Village, in particular Mr Yuichi Nishikawa and Mr Takahisa Kurimoto, for their help during the field work.


References


Blanchfield AL, Mackenzie AM, Gibbs A, Kondo H, Tamada T, Wilson CR (2001) Identification of Orchid fleck virus by reverse transcriptase–polymerase chain reaction and analysis of isolate relationships. Journal of Phytopathology 149, 713–718.
Crossref | GoogleScholarGoogle Scholar | open url image1

Bousalem M, Dallot S, Fuji S, Natsuaki KT (2003) Origin, world-wide dispersion, bio-geographical diversification, radiation and recombination: an evolutionary history of Yam mild mosaic virus (YMMV). Infection, Genetics and Evolution 3, 189–206.
Crossref | GoogleScholarGoogle Scholar | open url image1

Chang MU, Chun HH, Baek DH, Chung JD (1991) Studies on the viruses in orchids in Korea. 2. Dendrobium mosaic virus, Odontoglossum ringspot virus, Orchid fleck virus, and unidentified Potyvirus. Korean Journal of Plant Pathology 7, 118–129. open url image1

Choi SK, Choi JK, Park WM, Ryu KH (1999) RT–PCR detection and identification of three species of Cucumoviruses with a genus-specific single pair of primers. Journal of Virological Methods 83, 67–73.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Chomczynski P, Sacchi N (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Analytical Biochemistry 162, 156–159.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Cooper I, Jones RAC (2006) Wild plants and viruses: under-investigated ecosystems. Advances in Virus Research 67, 1–47.
Crossref | PubMed |
open url image1

Elliott MS, Zettler FW, Zimmerman MT, Barnett OW, LeGrande MD (1996) Problems with interpretation of serological assays in a virus survey of orchid species from Puerto Rico, Ecuador, and Florida. Plant Disease 80, 1161–1164. open url image1

Environment Agency of Japan (2000) ‘Threatened wildlife of Japan: red data book. Vascular plants. Vol. 8.’ 2nd edn. (Wildlife Research Center: Tokyo)

Fuji S, Ohishi K, Nakamae H (1998) Detection of tomato spotted wilt virus in chrysanthemum by immunocapture RT–PCR assay. Proceedings of the Kansai Plant Protection Society 40, 111–112. open url image1

Gara IW, Kondo H, Maeda T, Inouye N, Tamada T (1998) Calanthe mild mosaic virus, a new Potyvirus causing a mild mosaic disease of Calanthe orchid in Japan. Journal of Phytopathology 146, 357–363. open url image1

Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all Potyvirids by RT–PCR. Journal of Virological Methods 63, 9–16.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Gibbs A, Armstrong J, Mackenzie AM, Weiller GF (1998) The GPRIME package: computer programs for identifying the best regions of aligned genes to target in nucleic acid hybridization-based diagnostic tests, and their use with plant viruses. Journal of Virological Methods 74, 67–76.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Gibbs A, Mackenzie A, Blanchfield A, Cross P, Wilson C, Kitajima E, Nightingale M, Clements M (2000) Viruses of orchids in Australia; their identification, biology and control. Australian Orchid Review 65, 10–21. open url image1

Gibbs AJ, Armstrong JS, Gibbs MJ (2004) A type of nucleotide motif that distinguishes tobamovirus species more efficiently than nucleotide signatures. Archives of Virology 149, 1941–1954.
PubMed |
open url image1

Hammond J (1981) Viruses occurring in Plantago species in England. Plant Pathology 30, 237–243.
Crossref | GoogleScholarGoogle Scholar | open url image1

Hammond J, Lawson RH (1988) A strain of Bean yellow mosaic virus is aphid-transmitted from orchid. Acta Horticulturae 234, 365–370. open url image1

Hataya T, Inoue AK, Shikata E (1994) A PCR-microplate hybridization method for plant virus detection. Journal of Virological Methods 46, 223–236.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Hobbs HA, Eastburn DM, D’Arcy CJ, Masiunas BJ, Voegtlin DJ, Weinzierl RA, McCoppin NK (2000) Solanaceous weeds as possible sources of Cucumber mosaic virus in southern Illinois for aphid transmission to pepper. Plant Disease 84, 1221–1224.
Crossref | GoogleScholarGoogle Scholar | open url image1

Hu JS, Li HP, Barry K, Wang M (1995) Comparison of dot blot, ELISA, and RT–PCR assay for detection of two Cucumber mosaic virus isolates infecting banana in Hawaii. Plant Disease 73, 902–906. open url image1

Inouye N, Maeda T, Mitsuhara K (1982) Cucumber mosaic virus isolated from Calanthe discolor. Report of the Ohara Institute for Agricultural Biology 60, 1–11. open url image1

Inouye N, Maeda T, Mitsuhara K (1988) A strain of Clover yellow vein virus isolated from Calanthe sp. Acta Horticulturae 234, 61–68. open url image1

Inouye N (2001) ‘Viral diseases of orchid (in color).’ (Nobunkyo: Tokyo)

Jones RAC, Cowling WA (1995) Resistance to seed transmission of Cucumber mosaic virus in narrow-leafed lupins (Lupinus anyustifolius). Australian Journal of Agricultural Research 46, 1339–1352.
Crossref | GoogleScholarGoogle Scholar | open url image1

Karasawa K , Ishida G (1998) ‘Calanthe.’ (Yasaka-Shobo Inc.: Tokyo)

Kelley SE (1993) Viruses and the advantage of sex in Anthoxanthum odoratum: a review. Plant Species Biology 8, 217–223.
Crossref | GoogleScholarGoogle Scholar | open url image1

Kelley SE (1994) Viral pathogens and the advantage of sex in the perennial grass Anthoxanthum odoratum. Biological Sciences 346, 295–302.
Crossref | GoogleScholarGoogle Scholar | open url image1

Koopowitz H (2001) ‘Orchids and their conservation.’ (Timber Press: Oregon)

Langeveld SA, Dore J-M, Memelink J, Derks AFLM, van der Vlugt CIM, Asjes CJ, Bol JF (1991) Identification of Potyviruses using the polymerase chain reaction with degenerate primers. The Journal of General Virology 72, 1531–1541.
PubMed |
open url image1

MacClement WD, Richards MG (1956) Virus in wild plants. Canadian Journal of Botany 34, 793–799. open url image1

Maekawa F (1971) ‘The wild orchids of Japan (in color).’ (Seibundo-shinkosha: Tokyo)

Nolasco G, de Blas C, Torres V, Ponz F (1993) A method combining immunocapture and PCR amplification in a microtiter plate for the detection of plant viruses and subviral pathogens. Journal of Virological Methods 45, 201–218.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Perry KL (2001) Cucumoviruses. In ‘Virus insect plant interactions’. (Eds FH Kerry, PS Oney, ED James) pp. 167–180. (Academic Press: San Diego)

Raybould AF, Maskell LC, Edwards M-L, Cooper JI, Gray AJ (1999) The prevalence and spatial distribution of viruses in natural populations of Brassica oleracea. New Phytologist 141, 265–275.
Crossref | GoogleScholarGoogle Scholar | open url image1

Tanaka S, Nishii H, Ito S, Kameya-Iwaki M (1997) Detection of Cymbidium mosaic potexvirus and Odontoglossum ringspot tobamovirus from Thai orchids by rapid immunofilter paper assay. Plant Disease 81, 167–170.
Crossref | GoogleScholarGoogle Scholar | open url image1

Tomlinson JA, Carter AL (1970) Studies on the seed transmission of Cucumber mosaic virus in Chickweed (Stellaria media) in relation to the ecology of the virus. Annals of Applied Biology 66, 381–386. open url image1

Wang Y, Gaba V, Yang J, Palukaitis P, Gal-On A (2002) Characterization of synergy between Cucumber mosaic virus and Potyviruses in cucurbit hosts. Phytopathology 92, 51–58.
Crossref | GoogleScholarGoogle Scholar | open url image1

Yahara T, Oyama K (1993) Effect of virus infection on demographic traits of an agamospermous population of Eupatorium chinense (Astraceae). Oecologia 96, 310–315.
Crossref | GoogleScholarGoogle Scholar | open url image1

Yamamoto T, Ishii M (1981) Mosaic disease of Calanthe discolor Lind. Proceedings of the Association for Plant Protection of Shikoku 16, 75–79. open url image1

Yao JM, Tainter FH, Zimmerman MT, Barnett OW (1994) The occurrence of Tomato ringspot virus in Pothieva racemose. Plant Disease 78, 925. open url image1