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Plant function and evolutionary biology
RESEARCH ARTICLE

Components of the Arabidopsis autonomous floral promotion pathway, FCA and FY, are conserved in monocots

Somrutai Winichayakul A , Nicola L. Beswick A , Caroline Dean B and Richard C. Macknight A C
+ Author Affiliations
- Author Affiliations

A Department of Biochemistry, University of Otago, PO Box 56, Dunedin, New Zealand.

B Department of Cell and Developmental Biology, John Innes Centre, Norwich NR4 7UH, UK.

C Corresponding author. Email: richard.macknight@otago.ac.nz

Functional Plant Biology 32(4) 345-355 https://doi.org/10.1071/FP04245
Submitted: 22 December 2004  Accepted: 28 February 2005   Published: 26 April 2005

Abstract

The autonomous floral promotion pathway plays a key role in regulating the flowering time of the model dicot Arabidopsis thaliana (L.) Heynh. To investigate whether this pathway is present in monocots, two autonomous pathway components, FCA and FY, were isolated from rice (Oryza sativa L.) and ryegrass (Lolium perenne L.). The predicted FCA proteins (OsFCA and LpFCA) are highly conserved over the RNA-binding and WW protein interaction domains, and the FY proteins (OsFY and LpFY) possess highly conserved WD repeats but a less well conserved C-terminal region containing Pro–Pro–Leu–Pro (PPLP) motifs. In Arabidopsis, FCA limits its own production by promoting the polyadenylation of FCA pre-mRNA within intron 3 to form a truncated transcript called FCA-β. The identification of FCA-β transcripts in rice and ryegrass indicates that equivalent mechanisms occur in monocots. FCA’s autoregulation and flowering time functions require FCA to interact with the 3′ end-processing factor, FY. The FCA WW domain from Arabidopsis, which is thought to recognise PPLP motifs, interacted with ryegrass FY protein in GST-pulldown assays. Together these results suggest that the FCA and FY genes in monocots have similar functions to the dicot flowering-time genes. The cloning of these genes may provide targets for manipulating the flowering time of monocot species.

Keywords: flowering time, rice, ryegrass.


Acknowledgments

We thank Catherine Day, Rob Day, Igor Kardailsky, and Rebecca Laurie for critically reading this manuscript. This work was supported by The Marsden Fund, RM by a visiting fellowship at La Trobe University Institute for Advanced Study and SW by an Agricultural Marketing Research and Development Trust (AgMARDT) post-doctoral fellowship.


References


Armstead IP, Turner LB, Farrell M, Skot L, Gomez P, Montoya T, Donnison IS, King IP, Humphreys MO (2004) Synteny between a major heading-date QTL in perennial ryegrass (Lolium perenne L.) and the Hd3 heading-date locus in rice. Theoretical and Applied Genetics 108, 822–828.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Aukerman MJ, Lee I, Weigel D, Amasino RM (1999) The Arabidopsis flowering-time gene LUMINIDEPENDENS is expressed primarily in regions of cell proliferation and encodes a nuclear protein that regulates LEAFY expression. The Plant Journal 18, 195–203.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Ausin I, Alonso-Blanco C, Jarillo JA, Ruiz-Garcia L, Martinez-Zapater JM (2004) Regulation of flowering time by FVE, a retinoblastoma-associated protein. Nature Genetics 36, 162–166.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Black DL (2003) Mechanisms of alternative pre-messenger RNA splicing. Annual Review of Biochemistry 72, 291–336.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Gocal GF, King RW, Blundell CA, Schwartz OM, Andersen CH, Weigel D (2001) Evolution of floral meristem identity genes. Analysis of Lolium temulentum genes related to APETALA1 and LEAFY of Arabidopsis. Plant Physiology 125, 1788–1801.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

He Y, Michaels SD, Amasino RM (2003) Regulation of flowering time by histone acetylation in Arabidopsis. Science 302, 1751–1754.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Izawa T, Takahashi Y, Yano M (2003) Comparative biology comes into bloom: genomic and genetic comparison of flowering pathways in rice and Arabidopsis. Current Opinions in Plant Biology 6, 113–120.
Crossref | GoogleScholarGoogle Scholar | open url image1

Jensen CS, Salchert K, Nielsen KK (2001) A TERMINAL FLOWER1-like gene from perennial ryegrass involved in floral transition and axillary meristem identity. Plant Physiology 125, 1517–1528.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Jones ES, Mahoney NL, Hayward MD, Armstead IP, Jones JG , et al. (2002) An enhanced molecular marker based genetic map of perennial ryegrass (Lolium perenne) reveals comparative relationships with other Poaceae genomes. Genome 45, 282–295.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Kim HJ, Hyun Y, Park JY, Park MJ, Park MK , et al. (2004) A genetic link between cold responses and flowering time through FVE in Arabidopsis thaliana. Nature Genetics 36, 167–171.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Lee I, Aukerman MJ, Gore SL, Lohman KN, Michaels SD, Weaver LM, John MC, Feldmann KA, Amasino RM (1994) Isolation of LUMINIDEPENDENS: a gene involved in the control of flowering time in Arabidopsis. The Plant Cell 6, 75–83.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Li ZK, Yu SB, Lafitte HR, Huang N, Courtois B , et al. (2003) QTL × environment interactions in rice. I. heading date and plant height. Theoretical and Applied Genetics 108, 141–153.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Lim MH, Kim J, Kim YS, Chung KS, Seo YH, Lee I, Kim J, Hong CB, Kim HJ, Park CM (2004) A new Arabidopsis gene, FLK, encodes an RNA binding protein with K homology motifs and regulates flowering time via FLOWERING LOCUS C. The Plant Cell 16, 731–740.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Macknight R, Bancroft I, Page T, Lister C, Schmidt R , et al. (1997) FCA, a gene controlling flowering time in Arabidopsis, encodes a protein containing RNA-binding domains. Cell 89, 737–745.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Macknight R, Duroux M, Laurie R, Dijkwel P, Simpson G, Dean C (2002) Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA. The Plant Cell 14, 877–888.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Michaels SD, Amasino RM (1999) FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering. The Plant Cell 11, 949–956.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Michaels SD, Amasino RM (2001) Loss of FLOWERING LOCUS C activity eliminates the late-flowering phenotype of FRIGIDA and autonomous pathway mutations but not responsiveness to vernalization. The Plant Cell 13, 935–941.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Moore G, Devos KM, Wang Z, Gale MD (1995) Cereal genome evolution. Grasses, line up and form a circle. Current Biology 5, 737–739.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Mouradov A, Cremer F, Coupland G (2002) Control of flowering time: interacting pathways as a basis for diversity. The Plant Cell 14, S111–S130.
PubMed |
open url image1

Mouradov A, Glassick T, Hamdorf B, Murphy L, Fowler B, Marla S, Teasdale RD (1998) NEEDLY, a Pinus radiata ortholog of FLORICAULA / LEAFY genes, expressed in both reproductive and vegetative meristems. Proceedings of the National Academy of USA 95, 6537–6542.
Crossref | GoogleScholarGoogle Scholar | open url image1

Petersen K, Didion T, Andersen CH, Nielsen KK (2004) MADS-box genes from perennial ryegrass differentially expressed during transition from vegetative to reproductive growth. Journal of Plant Physiology 161, 439–447.
PubMed |
open url image1

Putterill J, Laurie R, Macknight R (2004) It’s time to flower: the genetic control of flowering time. BioEssays 26, 363–373.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Quesada V, Macknight R, Dean C, Simpson GG (2003) Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time. EMBO Journal 22, 3142–3152.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Rouse DT, Sheldon CC, Bagnall DJ, Peacock WJ, Dennis ES (2002) FLC, a repressor of flowering, is regulated by genes in different inductive pathways. The Plant Journal 29, 183–191.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Schomburg FM, Patton DA, Meinke DW, Amasino RM (2001) FPA, a gene involved in floral induction in Arabidopsis, encodes a protein containing RNA-recognition motifs. The Plant Cell 13, 1427–1436.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Sheldon CC, Burn JE, Perez PP, Metzger J, Edwards JA, Peacock WJ, Dennis ES (1999) The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation. The Plant Cell 11, 445–458.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Simpson GG, Dijkwel PP, Quesada V, Henderson I, Dean C (2003) FY Is an RNA 3′ end processing factor that interacts with FCA to control the Arabidopsis floral transition. Cell 113, 777–787.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Tadege M, Sheldon CC, Helliwell CA, Upadhyaya NM, Dennis ES, Peacock WJ (2003) Reciprocal control of flowering time by OsSOC1 in transgenic Arabidopsis and by FLC in transgenic rice. Plant Biotechnology Journal 1, 361–369.
Crossref | GoogleScholarGoogle Scholar | open url image1

Trevaskis B, Bagnall DJ, Ellis MH, Peacock WJ, Dennis ES (2003) MADS box genes control vernalization-induced flowering in cereals. Proceedings of the National Academy of USA 100, 13099–13104.
Crossref | GoogleScholarGoogle Scholar | open url image1

Waite R, Boyd J (1953) The water-soluble carbohydrates of grasses. 1. Changes occurring during the normal life-cycle. Journal of the Science of Food and Agriculture 102, 197–204. open url image1

Xiao J, Li J, Yuan L, Tanksley SD (1996) Identification of QTLs affecting traits of agronomic importance in a recombinant inbred population derived from a sub-specific rice cross. Theoretical and Applied Genetics 92, 230–244.
Crossref | GoogleScholarGoogle Scholar | open url image1

Yan L, Loukoianov A, Tranquilli G, Blechl IA, Khan W, Ramakrishna W, SanMiguel P, Bennetzen JL, Echenique V, Dubcovsky J (2004) The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science 303, 1640–1644.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Yan L, Loukoianov A, Tranquilli G, Helguera M, Fahima T, Dubcovsky J (2003) Positional cloning of the wheat vernalization gene VRN1. Proceedings of the National Academy of Sciences USA 100, 6263–6268.
Crossref | GoogleScholarGoogle Scholar | open url image1

Yano M, Harushima Y, Nagamura Y, Kurata N, Minobe Y, Sasaki T (1997) Identification of quantitative trait loci controlling heading date in rice using high-density linkage map. Theoretical and Applied Genetics 95, 1025–1032.
Crossref | GoogleScholarGoogle Scholar | open url image1

Zhang P, Tan HT, Pwee KH, Kumar PP (2004) Conservation of class C function of floral organ development during 300 million years of evolution from gymnosperms to angiosperms. The Plant Journal 37, 566–577.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1