Register      Login
Australian Journal of Botany Australian Journal of Botany Society
Southern hemisphere botanical ecosystems
RESEARCH ARTICLE

An unusually high heterochromatin content and large genome size in the palm tree Trithrinax campestris (Arecaceae)

P. Gaiero A E , C. Mazzella A , M. Vaio A D , A. E. Barros e Silva B , F. F. Santiñaque C , B. López-Carro C , G. A. Folle C and M. Guerra D
+ Author Affiliations
- Author Affiliations

A Department of Plant Biology, Facultad de Agronomía, Universidad de la República, Montevideo, Uruguay.

B Department of Biology, Universidade Federal de Paraíba, Areia, PB, Brazil.

C Flow Cytometry and Cell Sorting Core, Instituto de Investigaciones Biológicas Clemente Estable (IIBCE), Montevideo, Uruguay.

D Department of Botany, CCB, Universidade Federal de Pernambuco, Recife, PE, Brazil.

E Corresponding author. Email: pgaiero@fagro.edu.uy

Australian Journal of Botany 60(4) 378-382 https://doi.org/10.1071/BT12029
Submitted: 4 February 2012  Accepted: 28 March 2012   Published: 19 June 2012

Abstract

Trithrinax campestris (Burmeist.) Drude & Griseb., a neotropical member of tribe Cryosophileae, subfamily Coryphoideae (Arecaceae), forms small populations in the southern most extreme of the distribution for the tribe. To provide genetic information to assist its conservation, we performed detailed karyotype analysis in samples from Uruguay. The species displayed a karyotype with 2n = 36, a genome size (2C = 17.15 ± 0.07 pg) exceptionally high for a palm tree, and an elevated heterochromatin amount, represented by eight Chromomycin A3 (CMA) bands and numerous 4′,6-diamidino-2-phenylindole (DAPI) bands. 45S rDNA sites were found co-localising with CMA+ bands on Chromosome pairs 6, 9, 13 and 18, whereas a single pair of 5S rDNA sites was found on the proximal region of Chromosome pair 7. Its complex CMA and/or DAPI banding, together with the position of rDNA sites, allowed the identification of each chromosome pair and provided a useful tool to evaluate cytogenetic variations among populations and closely related species. Although this species maintains several karyotype similarities with its close relative T. brasiliensis, it can be promptly recognised by its DNA amount and DAPI bands. The large genome size in T. campestris is probably associated with its large blocks of heterochromatin, which represent 39% of its total chromosome length. Excluding the heterochromatin fraction, its chromosome size and 2C value become similar to those reported for most other diploid species in the family, suggesting that amplification of satellite DNA played an important role in its karyotype evolution.

Additional keywords: Cryosophileae, CMA/DAPI bands, 45S rDNA sites.


References

Avise JC (2004) ‘Molecular markers, natural History, and evolution.’ 2nd edn. (Sinauer: Sunderland, MA)

Barros e Silva AE, Guerra M (2010) The meaning of DAPI bands observed after C-banding and FISH procedures. Biotechnic & Histochemistry 85, 115–125.
The meaning of DAPI bands observed after C-banding and FISH procedures.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXjtVyjsbY%3D&md5=73e02547efc33d6dde9da2ac54799832CAS |

Castilho A, Vershinin A, Heslop-Harrison JS (2000) Repetitive DNA and the chromosomes in the genome of oil palm (Elaeis guineensis). Annals of Botany 85, 837–844.
Repetitive DNA and the chromosomes in the genome of oil palm (Elaeis guineensis).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3cXjs12hu7c%3D&md5=6c8c12010be93dc94a5be43cf0c7fa33CAS |

Chebataroff J (1974) ‘Palmeras del Uruguay.’ (Facultad de Humanidades y Ciencias: Montevideo, Uruguay)

Doležel J, Göhde W (1995) Sex determination in dioecious plants Melandrium album and M. rubrum using high-resolution flow cytometry. Cytometry 19, 103–106.
Sex determination in dioecious plants Melandrium album and M. rubrum using high-resolution flow cytometry.Crossref | GoogleScholarGoogle Scholar |

Doležel J, Bartoš J, Voglmayr H, Greilhuber J (2003) Nuclear DNA content and genome size of trout and human. Cytometry 51, 127–128.

Dransfield J, Uhl NW, Asmussen CB, Baker WJ, Harley MM, Lewis CE (2008) ‘Genera palmarum: the evolution and classification of palms.’ 2nd edn. (Kew Publishing: London)

Gaeta ML, Yuyama PM, Sartori D, Fungaro MHP, Vanzela ALL (2010) Occurrence and chromosome distribution of retroelements and NUPT sequences in Copaifera langsdorffii Desf. (Caesalpinioideae). Chromosome Research 18, 515–524.
Occurrence and chromosome distribution of retroelements and NUPT sequences in Copaifera langsdorffii Desf. (Caesalpinioideae).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXnsFGksbo%3D&md5=64d61de677abc700be1ae5bc8187e7c0CAS |

Guerra M (2000) Patterns of heterochromatin distribution in plant chromosomes. Genetics and Molecular Biology 23, 1029–1041.
Patterns of heterochromatin distribution in plant chromosomes.Crossref | GoogleScholarGoogle Scholar |

Hizume M, Sato S, Tanaka A (1980) A highly reproducible method of nucleolus organizer regions staining in plants. Stain Technology 55, 87–90.

Johnston JS, Bennett MD, Rayburn AL, Galbraith DW, Price HJ (1999) Reference standards for determination of DNA content of plant nuclei. American Journal of Botany 86, 609–613.
Reference standards for determination of DNA content of plant nuclei.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1MXjslersr4%3D&md5=c72f184554d03ad5664a75dc8d324a0cCAS |

Komarova NY, Grabe T, Huigen DJ, Hemleben V, Volkov RA (2004) Organization, differential expression and methylation of rDNA in artificial Solanum allopolyploids. Plant Molecular Biology 56, 439–463.
Organization, differential expression and methylation of rDNA in artificial Solanum allopolyploids.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXhtFWqsbrK&md5=cc37390543d273ba0e2d4c56dbf3727bCAS |

Loureiro J, Trávníček P, Rauchová J, Urfus T, Vít P, Štech M, Castro S, Suda J (2010) The use of flow cytometry in the biosystematics, ecology and population biology of homoploid plants. Preslia 82, 3–21.

McStay B, Grummt I (2008) The epigenetics of rRNA genes: from molecular to chromosome biology. Annual Review of Cell and Developmental Biology 24, 131–157.
The epigenetics of rRNA genes: from molecular to chromosome biology.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXhtlOgtbnF&md5=6e5ccb791bf5cb1decac81254e3efc4bCAS |

Palomino G, Quero HJ (1992) Karyotype analysis of three species of Sabal L. (Palmae: Coryphoideae). Cytologia 57, 485–489.
Karyotype analysis of three species of Sabal L. (Palmae: Coryphoideae).Crossref | GoogleScholarGoogle Scholar |

Röser M (1993) Variation and evolution of karyotype characters in palm subfamily Coryphoideae s.l. Botanica Acta 106, 170–182.

Röser M (1994) Pathways of karyological differentiation in palms (Arecaceae). Plant Systematics and Evolution 189, 83–122.
Pathways of karyological differentiation in palms (Arecaceae).Crossref | GoogleScholarGoogle Scholar |

Röser M (2000) DNA amounts and qualitative properties of nuclear genomes in palms (Arecaceae). In ‘Monocots. Systematics and evolution’. (Eds KL Wilson, DA Morrison) pp. 538–544. (CSIRO Publishing: Melbourne)

Röser M, Johnson M, Hanson L (1997) Nuclear DNA amounts in palms (Arecaceae). Botanica Acta 110, 79–89.

SAS Institute Inc. (1990) ‘SAS/STAT software.’ (SAS Institute Inc.: Cary, NC)

Souza LGR, Crosa O, Guerra M (2010) Karyological circumscription of Ipheion Rafinesque (Gilliesioideae, Alliaceae). Plant Systematics and Evolution 287, 119–127.
Karyological circumscription of Ipheion Rafinesque (Gilliesioideae, Alliaceae).Crossref | GoogleScholarGoogle Scholar |

Sumner AT (1990) ‘Chromosome banding.’ (Unwin Hyman: London)

Vaio M, Speranza P, Valls JF, Guerra M, Mazzella C (2005) Localization of the 5S and 45S rDNA sites and cpDNA sequence analysis in species of the Quadrifaria group of Paspalum (Poaceae, Paniceae). Annals of Botany 96, 191–200.
Localization of the 5S and 45S rDNA sites and cpDNA sequence analysis in species of the Quadrifaria group of Paspalum (Poaceae, Paniceae).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXps1ymtr0%3D&md5=8ac55471780508f62095cc57f13e975aCAS |

Zonneveld BJM (2008) The systematic value of nuclear DNA content for all species of Narcissus L. (Amaryllidaceae). Plant Systematics and Evolution 275, 109–132.
The systematic value of nuclear DNA content for all species of Narcissus L. (Amaryllidaceae).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXht1Sqs7bK&md5=3d55d6132100c6bd291c7ba4fc2510fbCAS |