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RESEARCH ARTICLE

Distribution and spatial modelling of a soft coral habitat in the Port Stephens–Great Lakes Marine Park: implications for management

Davina E. Poulos A D , Christopher Gallen B , Tom Davis C , David J. Booth A and David Harasti B
+ Author Affiliations
- Author Affiliations

A School of Life Sciences, University of Technology, Sydney, NSW 2007, Australia.

B Fisheries Research, Marine Ecosystems, NSW Department of Primary Industries, Locked Bag 800, Nelson Bay, NSW 2315, Australia.

C National Marine Science Centre, Southern Cross University, PO Box 4321, Coffs Harbour, NSW 2450, Australia.

D Corresponding author. Present address: College of Marine & Environmental Sciences, James Cook University, Townsville, Qld 4811, Australia. Email: davina.poulos@my.jcu.edu.au

Marine and Freshwater Research 67(2) 256-265 https://doi.org/10.1071/MF14059
Submitted: 13 May 2013  Accepted: 9 March 2015   Published: 22 June 2015

Abstract

Habitat mapping is a useful method for understanding the complex spatial relationships that exist in the marine environment, and is used to evaluate the effectiveness of management strategies, particularly in regards to marine protected areas. This study explored the observed and predicted distribution of an uncommon soft coral species, Dendronephthya australis within the Port Stephens–Great Lakes Marine Park. Dendronephthya australis was mapped by video operated by a SCUBA diver towing a time synchronised GPS. A species distribution model was created to explore the possible occurrence of D. australis outside of the mapped area, using four environmental parameters: bathymetry, slope of seabed, velocity of tidal currents, and distance from estuary mouth. Dendronephthya australis colonies occurred along the southern shoreline in the Port Stephens estuary between Fly Point and Corlette Point, but no colonies were found within sanctuary (no-take) zones within the marine park. The model illustrated limited habitat suitability for D. australis within a larger section of the estuary, suggesting this species has specific environmental requirements survival. Owing to its current threats (anchor damage and fishing line entanglement), implications from these findings will assist future management and protection decisions, particularly in regard to its protection within a marine park.

Additional keywords: Dendronephthya australis, estuary, marine protected area, Maxent, species distribution model, towed-GPS.


References

Aïssi, M., Ouammi, A., Fiori, C., and Alessi, J. (2014). Modelling predicted sperm whale habitat in the central Mediterranean Sea: requirement for protection beyond the Pelagos sanctuary boundaries. Aquatic Conservation: Marine and Freshwater Ecosystems 24, 50–58.
Modelling predicted sperm whale habitat in the central Mediterranean Sea: requirement for protection beyond the Pelagos sanctuary boundaries.Crossref | GoogleScholarGoogle Scholar |

Austin, T. P., Short, A. D., Hughes, M. G., Vila-Concejo, A., and Ranasinghe, R. (2009). Tidal hydrodynamics of a micro-tidal, wave dominated flood-tide delta: Port Stephens: Australia. Journal of Coastal Research 56, 693–697.

Babcock, R. C., Shears, N. T., Alcala, A. C., Barrett, N. S., Edgar, G. J., Lafferty, K. D., McClanahan, T. R., and Russ, G. R. (2010). Decadal trends in marine reserves reveal differential rates of change in direct and indirect effects. Proceedings of the National Academy of Sciences of the United States of America 107, 18256–18261.
Decadal trends in marine reserves reveal differential rates of change in direct and indirect effects.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXhtl2ktr7E&md5=3c990dac7d89bb4009be8ad877ac748eCAS | 20176941PubMed |

Barrett, N. S., and Edgar, G. J. (2010). Distribution of benthic communities in the fjord-like Bathurst Channel ecosystem, south-western Tasmania, a globally anomalous estuarine protected area. Aquatic Conservation: Marine and Freshwater Ecosystems 20, 397–406.
Distribution of benthic communities in the fjord-like Bathurst Channel ecosystem, south-western Tasmania, a globally anomalous estuarine protected area.Crossref | GoogleScholarGoogle Scholar |

Bridge, T., Beaman, R., Done, T., and Webster, J. (2012). Predicting the location and spatial extent of submerged coral reef habitat in the Great Barrier Reef World Heritage Area, Australia. PLoS One 7, e48203.
Predicting the location and spatial extent of submerged coral reef habitat in the Great Barrier Reef World Heritage Area, Australia.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38Xhs12qs7rN&md5=02e7a5360c0f68405767b31d8c9f77d1CAS | 23118952PubMed |

Brown, C. J., Smith, S. J., Lawton, P., and Anderson, J. T. (2011). Benthic habitat mapping: a review of progress towards improved understanding of the spatial ecology of the seafloor using acoustic techniques. Estuarine, Coastal and Shelf Science 92, 502–520.
Benthic habitat mapping: a review of progress towards improved understanding of the spatial ecology of the seafloor using acoustic techniques.Crossref | GoogleScholarGoogle Scholar |

Day, J., Fernandes, L., Lewis, A., De’ath, G., Slegers, S., Barnett, B., Kerrigan, B., Breen, D., Innes, J., Oliver, J., Ward, T., and Lowe, D. (2002) The representative areas program for protecting biodiversity in the Great Barrier Reef World Heritage Area. In ‘Proceedings of the Ninth International Coral Reef Symposium’, 23–27 October 2000, Bali, Indonesia. (Eds M. Kasim Moosa.) pp. 687–696. (Ministry of Environment, Indonesian Institute of Sciences, International Society for Reef Studies: Bali, Indonesia.)

Edgar, G. J., Last, P. R., Barrett, N. S., Gowlett-Holmes, K., Driessen, M., and Mooney, P. (2010). Conservation of natural wilderness values in the Port Davey marine and estuarine protected area, south-western Tasmania. Aquatic Conservation: Marine and Freshwater Ecosystems 20, 297–311.
Conservation of natural wilderness values in the Port Davey marine and estuarine protected area, south-western Tasmania.Crossref | GoogleScholarGoogle Scholar |

Elith, J., Graham, C. H., Anderson, R. P., Dudík, M., Ferrier, S., Guisan, A., Hijmans, R. J., Huettmann, F., Leathwick, J. R., Lehmann, A., Li, J., Lohmann, L. G., Loiselle, B. A., Manion, G., Moritz, C., Nakamura, M., Nakazawa, Y., Overton, J. McC., Peterson, A. T., Phillips, S. J., Richardson, K. S., Scachetti-Pereira, R., Schapire, R. E., Sobero’n, J., Williams, S., Wisz, M. S., and Zimmermann, N. E. (2006). Novel methods improve prediction of species’ distributions from occurrence data. Ecography 29, 129–151.
Novel methods improve prediction of species’ distributions from occurrence data.Crossref | GoogleScholarGoogle Scholar |

Elith, J., Phillips, S. J., Hastie, T., Dudík, M., Chee, Y. E., and Yates, C. J. (2011). A statistical explanation of MaxEnt for ecologists. Diversity & Distributions 17, 43–57.
A statistical explanation of MaxEnt for ecologists.Crossref | GoogleScholarGoogle Scholar |

Fabricius, K., and Alderslade, P. (2001). ‘Soft corals and sea fans: a comprehensive guide to the tropical shallow water genera of the central-west Pacific, the Indian Ocean and the Red Sea.’ (Australian Institute of Marine Science: Townsville, Qld.)

Fabricius, K. E., Genin, A., and Benayahu, Y. (1995). Flow-dependent herbivory and growth in zooxanthellae-free soft corals. Limnology and Oceanography 40, 1290–1301.
Flow-dependent herbivory and growth in zooxanthellae-free soft corals.Crossref | GoogleScholarGoogle Scholar |

Georgian, S. E., Shedd, W., and Cordes, E. E. (2014). High resolution ecological niche modelling of the cold-water coral Lophelia pertusa in the Gulf of Mexico. Marine Ecology Progress Series 506, 145–161.
High resolution ecological niche modelling of the cold-water coral Lophelia pertusa in the Gulf of Mexico.Crossref | GoogleScholarGoogle Scholar |

Glasby, T. M. (2013). Caulerpa taxifolia in seagrass meadows: killer or opportunistic weed? Biological Invasions 15, 1017–1035.
Caulerpa taxifolia in seagrass meadows: killer or opportunistic weed?Crossref | GoogleScholarGoogle Scholar |

Harasti, D., and Malcolm, H. (2013). Distribution, relative abundance and size composition of the threatened serranid Epinephelus daemelii in New South Wales, Australia. Journal of Fish Biology 83, 378–395.
Distribution, relative abundance and size composition of the threatened serranid Epinephelus daemelii in New South Wales, Australia.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BC3sfls1yqug%3D%3D&md5=d61489008515054d6bc271671494fcc1CAS | 23902312PubMed |

Harasti, D., Martin-Smith, K., and Gladstone, W. (2012). Population dynamics and life history of a geographically restricted seahorse, Hippocampus whitei. Journal of Fish Biology 81, 1297–1314.
Population dynamics and life history of a geographically restricted seahorse, Hippocampus whitei.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BC38bltVemsg%3D%3D&md5=033c3e6c4af3cbd17049529031ee720aCAS | 22957871PubMed |

Harasti, D., Gladstone, W., and Martin Smith, K. M. (2014). Ontogenetic and sex-based differences in habitat preferences and site fidelity of the White’s seahorse Hippocampus whitei. Journal of Fish Biology 85, 1413–1428.
Ontogenetic and sex-based differences in habitat preferences and site fidelity of the White’s seahorse Hippocampus whitei.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BC2cbpsVWnsg%3D%3D&md5=6212eada2d32e8adebfa5911692b28d6CAS | 25098708PubMed |

Harris, P. T., Bridge, T. C., Beaman, R. J., Webster, J. M., Nichol, S. L., and Brooke, B. P. (2013). Submerged banks in the Great Barrier Reef, Australia, greatly increase available coral reef habitat. ICES Journal of Marine Science 70, 284–293.
Submerged banks in the Great Barrier Reef, Australia, greatly increase available coral reef habitat.Crossref | GoogleScholarGoogle Scholar |

Hattab, T., Lasram, F. B. R., Albouy, C., Sammari, C., Romdhane, M. S., Cury, P., Leprieur, F., and Le Loc’h, F. (2013). The use of a predictive habitat model and a fuzzy logic approach for marine management and planning. PLoS One 8, e76430.
The use of a predictive habitat model and a fuzzy logic approach for marine management and planning.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3sXhs1Cqu7nI&md5=97168c8772428febcaa5c5f78aac731bCAS | 24146867PubMed |

Hervouet, J. M. (2000). TELEMAC modelling system: an overview. Hydrological Processes 14, 2209–2210.
TELEMAC modelling system: an overview.Crossref | GoogleScholarGoogle Scholar |

Hewitt, J. E., Thrush, S. F., Legendre, P., Funnell, G. A., Ellis, J., and Morrison, M. (2004). Mapping of marine soft-sediment communities: integrated sampling for ecological interpretation. Ecological Applications 14, 1203–1216.
Mapping of marine soft-sediment communities: integrated sampling for ecological interpretation.Crossref | GoogleScholarGoogle Scholar |

Howell, K. L., Davies, J. S., and Narayanaswamy, B. E. (2010). Identifying deep-sea megafaunal epibenthic assemblages for use in habitat mapping and marine protected area network design. Journal of the Marine Biological Association of the United Kingdom 90, 33–68.
Identifying deep-sea megafaunal epibenthic assemblages for use in habitat mapping and marine protected area network design.Crossref | GoogleScholarGoogle Scholar |

Ierodiaconou, D., Monk, J., Rattray, A., Laurenson, L., and Versace, V. L. (2011). Comparison of automated classification techniques for predicting benthic biological communities using hydro-acoustics and video observations. Continental Shelf Research 31, S28–S38.
Comparison of automated classification techniques for predicting benthic biological communities using hydro-acoustics and video observations.Crossref | GoogleScholarGoogle Scholar |

Jiang, A. W., Ranasinghe, R., and Cowell, P. (2013). Contemporary hydrodynamics and morphological change of a microtidal estuary: a numerical modelling study. Ocean Dynamics 63, 21–41.
Contemporary hydrodynamics and morphological change of a microtidal estuary: a numerical modelling study.Crossref | GoogleScholarGoogle Scholar |

Jordan, A., Lawler, M., Halley, V., and Barrett, N. (2005). Seabed habitat mapping in the Kent Group of islands and its role in marine protected area planning. Aquatic Conservation: Marine and Freshwater Ecosystems 15, 51–70.
Seabed habitat mapping in the Kent Group of islands and its role in marine protected area planning.Crossref | GoogleScholarGoogle Scholar |

Jordan, A., Davies, P., Ingleton, T., Foulsham, E., Neilson, J., and Pritchard, T. (2010). ‘Seabed habitat mapping of the continental shelf of NSW.’ (Department of Environment, Climate Change and Water, Waters and Coastal Science Section, Scientific Services Division: Sydney.)

Kelaher, B. P., Coleman, M. A., Broad, A., Rees, M. J., Jordan, A., and Davis, A. R. (2014). Changes in fish assemblages following the establishment of a network of no-take marine reserves and partially protected areas. PLoS One 9, e85825.
Changes in fish assemblages following the establishment of a network of no-take marine reserves and partially protected areas.Crossref | GoogleScholarGoogle Scholar | 24454934PubMed |

Kelleher, G. (1999). ‘Guidelines for marine protected areas.’ (IUCN: Gland, Switzerland; and Cambridge, UK.)

Kenny, A. J., Cato, I., Desprez, M., Fader, G., Schuttenhelm, R. T. E., and Side, J. (2003). An overview of seabed-mapping technologies in the context of marine habitat classification. ICES Journal of Marine Science 60, 411–418.
An overview of seabed-mapping technologies in the context of marine habitat classification.Crossref | GoogleScholarGoogle Scholar |

Levin, S. A. (1992). The problem of pattern and scale in ecology. Ecology 73, 1943–1967.
The problem of pattern and scale in ecology.Crossref | GoogleScholarGoogle Scholar |

Malcolm, H. A., Smith, S. D., and Jordan, A. (2010). Using patterns of reef fish assemblages to refine a Habitat Classification System for marine parks in NSW, Australia. Aquatic Conservation: Marine and Freshwater Ecosystems 20, 83–92.
Using patterns of reef fish assemblages to refine a Habitat Classification System for marine parks in NSW, Australia.Crossref | GoogleScholarGoogle Scholar |

Malcolm, H. A., Foulsham, E., Pressey, R. L., Jordan, A., Davies, P. L., Ingleton, T., and Smith, S. D. (2012). Selecting zones in a marine park: early systematic planning improves cost-efficiency; combining habitat and biotic data improves effectiveness. Ocean and Coastal Management 59, 1–12.
Selecting zones in a marine park: early systematic planning improves cost-efficiency; combining habitat and biotic data improves effectiveness.Crossref | GoogleScholarGoogle Scholar |

Marshall, C. A., Glegg, G. A., and Howell, K. L. (2014). Species distribution modelling to support marine conservation planning: the next steps. Marine Policy 45, 330–332.
Species distribution modelling to support marine conservation planning: the next steps.Crossref | GoogleScholarGoogle Scholar |

Merow, C., and Silander, J. A. (2014). A comparison of Maxlike and Maxent for modelling species distributions. Methods in Ecology and Evolution 5, 215–225.
A comparison of Maxlike and Maxent for modelling species distributions.Crossref | GoogleScholarGoogle Scholar |

Merow, C., Smith, M. J., and Silander, J. A. (2013). A practical guide to MaxEnt for modeling species’ distributions: what it does, and why inputs and settings matter. Ecography 36, 1058–1069.
A practical guide to MaxEnt for modeling species’ distributions: what it does, and why inputs and settings matter.Crossref | GoogleScholarGoogle Scholar |

Monk, J., Ierodiaconou, D., Bellgrove, A., Harvey, E., and Laurenson, L. (2011). Remotely sensed hydroacoustics and observation data for predicting fish habitat suitability. Continental Shelf Research 31, S17–S27.
Remotely sensed hydroacoustics and observation data for predicting fish habitat suitability.Crossref | GoogleScholarGoogle Scholar |

Moore, C. H., Harvey, E. S., and Van Niel, K. (2010). The application of predicted habitat models to investigate the spatial ecology of demersal fish assemblages. Marine Biology 157, 2717–2729.
The application of predicted habitat models to investigate the spatial ecology of demersal fish assemblages.Crossref | GoogleScholarGoogle Scholar |

Moore, C. H., Van Niel, K., and Harvey, E. S. (2011). The effect of landscape composition and configuration on the spatial distribution of temperate demersal fish. Ecography 34, 425–435.
The effect of landscape composition and configuration on the spatial distribution of temperate demersal fish.Crossref | GoogleScholarGoogle Scholar |

NSW Department of Public Works and Services (1998). Port Stephens tidal data collection September 1993. Manly Hydraulics Laboratory, Report number MHL716.

NSW Marine Parks Authority (2001). Developing a representative system of marine protected areas in NSW – an overview. Available at http://www.mpa.nsw.gov.au/pdf/developing-representative-mpa.pdf [Verified 19 February 2014].

Phillips, S. J., and Dudik, M. (2008). Modeling of species distributions with Maxent: new extensions and a comprehensive evaluation. Ecography 31, 161–175.
Modeling of species distributions with Maxent: new extensions and a comprehensive evaluation.Crossref | GoogleScholarGoogle Scholar |

Phillips, S. J., Anderson, R. P., and Schapire, R. E. (2006). Maximum entropy modeling of species geographic distributions. Ecological Modelling 190, 231–259.
Maximum entropy modeling of species geographic distributions.Crossref | GoogleScholarGoogle Scholar |

Poulos, D. E., Harasti, D., Gallen, C., and Booth, D. J. (2013). Biodiversity value of a geographically restricted soft coral species in a temperate estuary. Aquatic Conservation: Marine and Freshwater Ecosystems 23, 838–849.
Biodiversity value of a geographically restricted soft coral species in a temperate estuary.Crossref | GoogleScholarGoogle Scholar |

Rees, M. J., Jordan, A., Price, O. F., Coleman, M. A., and Davis, A. R. (2014). Abiotic surrogates for temperate rocky reef biodiversity: implications for marine protected areas. Diversity & Distributions 20, 284–296.
Abiotic surrogates for temperate rocky reef biodiversity: implications for marine protected areas.Crossref | GoogleScholarGoogle Scholar |

Rengstorf, A. M., Yesson, C., Brown, C., and Grehan, A. J. (2013). High-resolution habitat suitability modelling can improve conservation of vulnerable marine ecosystems in the deep sea. Journal of Biogeography 40, 1702–1714.
High-resolution habitat suitability modelling can improve conservation of vulnerable marine ecosystems in the deep sea.Crossref | GoogleScholarGoogle Scholar |

Richins, H., and Mayes, G. (2008). Historical progression of sustainable management concerning marine tourism activities: a case study in Eastern Australia. Tourism Planning and Development 5, 97–112.
Historical progression of sustainable management concerning marine tourism activities: a case study in Eastern Australia.Crossref | GoogleScholarGoogle Scholar |

Roberts, S., and Hirshfield, M. (2004). Deep-sea corals: out of sight, but no longer out of mind. Frontiers in Ecology and Evolution 2, 123–130.
Deep-sea corals: out of sight, but no longer out of mind.Crossref | GoogleScholarGoogle Scholar |

Roberts, C. M., Andelman, S., Branch, G., Bustamante, R. H., Castilla, J. C., Dugan, J., Halpern, B. S., Lafferty, K. D., Leslie, H., Lubchenco, J., McArdle, D., Possingham, H. P., Ruckelshaus, M., and Warner, R. R. (2003). Ecological criteria for evaluating candidate sites for marine reserves. Ecological Applications 13, 199–214.
Ecological criteria for evaluating candidate sites for marine reserves.Crossref | GoogleScholarGoogle Scholar |

Roy, P. S., and Boyd, R. (1996). ‘Quaternary geology of a tectonically stable, wave-dominated, sediment-deficient margin, Southeast Australia. IGCP Project #367, Field Guide to the Central New South Wales Coast.’ (Geological Survey of New South Wales: Sydney.)

Schultz, A. L., Malcolm, H. A., Bucher, D. J., and Smith, S. D. (2012). Effects of reef proximity on the structure of fish assemblages of unconsolidated substrata. PLoS One 7, e49437.
Effects of reef proximity on the structure of fish assemblages of unconsolidated substrata.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38XhvVShsrbM&md5=053d8eaa850d4a45977a666f7ec18f16CAS | 23189145PubMed |

Schultz, A. L., Malcolm, H. A., Bucher, D. J., Linklater, M., and Smith, S. D. (2014). Depth and medium-scale spatial processes influence fish assemblage structure of unconsolidated habitats in a subtropical marine park. PLoS One 9, e96798.
Depth and medium-scale spatial processes influence fish assemblage structure of unconsolidated habitats in a subtropical marine park.Crossref | GoogleScholarGoogle Scholar | 24824998PubMed |

Stevens, T., and Connolly, R. M. (2005). Local-scale mapping of benthic habitats to assess representation in a marine protected area. Marine and Freshwater Research 56, 111–123.
Local-scale mapping of benthic habitats to assess representation in a marine protected area.Crossref | GoogleScholarGoogle Scholar |

Vila-Concejo, A., Short, A. D., Hughes, M. G., and Ranasinghe, R. (2007). Flood-tide delta morphodynamics and management implications, Port Stephens, Australia. Journal of Coastal Research 50, 705–709.

Vila-Concejo, A., Austin, T., Harris, D., Hughes, M., Short, A., and Ranasinghe, R. (2011). Estuarine beach evolution in relation to a flood-tide delta. Journal of Coastal Research 64, 190–194.

Wainwright, D. (2011). Halifax Park/Fly Point sand accumulation study. Report prepared for Port Stephens–Great Lakes Marine Park by BMT WBM. Available at http://www.mpa.nsw.gov.au/pdf/Halifax%20-%20Study.pdf [Verified 14 May 2015].

Wright, D. J., and Heyman, W. D. (2008). Introduction to the special issue: marine and coastal GIS for geomorphology, habitat mapping and marine reserves. Marine Geodesy 31, 223–230.
Introduction to the special issue: marine and coastal GIS for geomorphology, habitat mapping and marine reserves.Crossref | GoogleScholarGoogle Scholar |

Yackulic, C. B., Chandler, R., Zipkin, E. F., Royle, J. A., Nichols, J. D., Campbell Grant, E. H., and Veran, S. (2013). Presence-only modelling using MAXENT: when can we trust the inferences? Methods in Ecology and Evolution 4, 236–243.

Ysebaert, T., and Herman, P. M. J. (2002). Spatial and temporal variation in benthic macrofauna and relationships with environmental variables in an estuarine, intertidal soft-sediment environment. Marine Ecology Progress Series 244, 105–124.
Spatial and temporal variation in benthic macrofauna and relationships with environmental variables in an estuarine, intertidal soft-sediment environment.Crossref | GoogleScholarGoogle Scholar |