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RESEARCH ARTICLE

Variation in drought-tolerance components and their interrelationships in the core collection of foxtail millet (Setaria italica) germplasm

Lakshmanan Krishnamurthy A E , Hari Deo Upadhyaya A B C , Junichi Kashiwagi D , Ramamoorthy Purushothaman A , Sangam Lal Dwivedi A and Vincent Vadez A
+ Author Affiliations
- Author Affiliations

A International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru 502 324, Telangana, India.

B Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA.

C UWA Institute of Agriculture, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia.

D Crop Science Laboratory, Graduate School of Agriculture, Hokkaido University, Kita 9 Nishi 9, Kita-Ku, Sapporo, 060-8589, Japan.

E Corresponding author. Email: l.krishnamurthy@cgiar.org, lkm1949@gmail.com

Crop and Pasture Science 67(8) 834-846 https://doi.org/10.1071/CP15338
Submitted: 6 October 2015  Accepted: 5 April 2016   Published: 17 August 2016

Abstract

Foxtail millet (Setaria italica (L.) P.Beauv.) is an ancient cereal cultivated worldwide in arid and marginal lands. It is an ideal crop for the changing climate, with high photosynthetic efficiency. A trait-based selection for drought tolerance is sought for yield stability. The present work had segregated the drought yield as total water use (T), transpiration efficiency (TE) and harvest index (HI) and assessed the importance of these components and their association with drought tolerance. The core collection of foxtail millet germplasm (n = 155) was evaluated in mini-lysimeters under both terminal drought stress (DS) and well-watered (WW) environments. The contribution of T to grain yield under drought was minor but the contribution of TE was positive and of HI negative. Crop duration, T and TE positively influenced, and HI negatively influenced, shoot biomass production. Under drought, the core germplasm accessions varied in shoot biomass, grain yield, HI and T by >3-fold and in TE by 2-fold. Categorisation of the germplasm for TE had differentiated groups of accessions as high TE (n = 17) and low TE (n = 22). Among the three races of foxtail millet, indica was strong for T and TE, and maxima and moharia for HI, with useful exceptions.

Additional keywords: crop productivity, genetic variability, G × E interaction, small millet, subraces, water deficit.


References

Ahanchede A, Hamon SP, Darmency H (2004) Why no tetraploid cultivar of foxtail millet? Genetic Resources and Crop Evolution 51, 227–230.
Why no tetraploid cultivar of foxtail millet?Crossref | GoogleScholarGoogle Scholar |

Araus JL, Slafer GA, Reynolds MP, Royo C (2002) Plant breeding and drought in C3 cereals: What should we breed for? Annals of Botany 89, 925–940.
Plant breeding and drought in C3 cereals: What should we breed for?Crossref | GoogleScholarGoogle Scholar | 12102518PubMed |

Austin DF (2006) Foxtail millets (Setaria: Poaceae)—abandoned food in two hemispheres. Economic Botany 60, 143–158.
Foxtail millets (Setaria: Poaceae)—abandoned food in two hemispheres.Crossref | GoogleScholarGoogle Scholar |

Bartlett MS (1937) Properties of sufficiency and statistical tests. Proceedings of the Royal Society of London. Series A, Mathematical and Physical Sciences 160, 268–282.
Properties of sufficiency and statistical tests.Crossref | GoogleScholarGoogle Scholar |

Bennetzen JL, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli AC, Estep M, Feng L, Vaughn JN, Grimwood J, Jenkins J, Barry K, Lindquist E, Hellsten U, Deshpande S, Wang X, Wu X, Mitros T, Triplett J, Yang X, Ye C-Y, Mauro-Herrera M, Wang L, Li P, Sharma M, Sharma R, Ronald PC, Panaud O, Kellogg EA, Brutnell TP, Doust AN, Tuskan GA, Rokhsar D, Devos KM (2012) Reference genome sequence of the model plant Setaria. Nature Biotechnology 30, 555–561.
Reference genome sequence of the model plant Setaria.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38XmvFCitL0%3D&md5=0a7116a7a170d8d262d34aa604bf1c09CAS | 22580951PubMed |

Blum A (2005) Drought resistance, water-use efficiency, and yield potential—are they compatible, dissonant, or mutually exclusive? Australian Journal of Agricultural Research 56, 1159–1168.
Drought resistance, water-use efficiency, and yield potential—are they compatible, dissonant, or mutually exclusive?Crossref | GoogleScholarGoogle Scholar |

Blum A (2009) Effective use of water (EUW) and not water-use efficiency is the target of crop yield improvement under drought stress. Field Crops Research 112, 119–123.
Effective use of water (EUW) and not water-use efficiency is the target of crop yield improvement under drought stress.Crossref | GoogleScholarGoogle Scholar |

Condon AG, Richards RA, Rebetzke GJ, Farquhar GD (2002) Improving intrinsic water-use efficiency and crop yield. Crop Science 42, 122–131.
Improving intrinsic water-use efficiency and crop yield.Crossref | GoogleScholarGoogle Scholar | 11756262PubMed |

Davies WJ, Jones HG (1991) ‘Abscisic acid physiology and biochemistry.’ (BIOS Scientific Publishers: Oxford, UK)

Diao X (2007) Foxtail millet production and future development direction in China. In ‘Reports on minor grain development in China’. (Eds Y Chai, SH Wan) pp. 32–43. (China Agricultural Science and Technology Press: Beijing)

Doorenbos J, Kassam AH (1979) Yield response to water. Irrigation and Drainage Paper No. 33. FAO, Rome.

Doust AN, Kellogg EA, Devos KM, Bennetzen JL (2009) Foxtail millet: A sequence-driven grass model system. Plant Physiology 149, 137–141.
Foxtail millet: A sequence-driven grass model system.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXjt1Wqsbw%3D&md5=fe8ca4a497f06e848daad56c86996336CAS | 19126705PubMed |

Dwivedi S, Upadhyaya HD, Senthilvel S, Hash CT, Fukunaga K, Diao X, Santra D, Baltensperger D, Prasad M (2012) Millets: Genetic and genomic resources. Plant Breeding Reviews 35, 246–375.

Fereres E, Soriano MA (2007) Deficit irrigation for reducing agricultural water use. Journal of Experimental Botany 58, 147–159.
Deficit irrigation for reducing agricultural water use.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXhtlOlt70%3D&md5=3bae483f5fab23c78a40d7165bc01d44CAS | 17088360PubMed |

Genstat (2011) ‘Genstat software for windows Release 14.1.’ (VSN International Ltd: Hemel Hempstead, UK) Available at: http://www.vsni.co.uk

Kashiwagi J, Krishnamurthy L, Purushothaman R, Upadhyaya HD, Gaur PM, Gowda CLL, Ito O, Varshney RK (2015) Scope for improvement of yield under drought through the root traits in chickpea (Cicer arietinum L.). Field Crops Research 170, 47–54.
Scope for improvement of yield under drought through the root traits in chickpea (Cicer arietinum L.).Crossref | GoogleScholarGoogle Scholar |

Kato Y, Kamoshita A, Yamagishi J (2008) Preflowering abortion reduces spikelet number in upland rice (Oryza sativa L.) under water stress. Crop Science 48, 2389–2395.
Preflowering abortion reduces spikelet number in upland rice (Oryza sativa L.) under water stress.Crossref | GoogleScholarGoogle Scholar |

Kirkegaard JA, Lilley JM, Howe GN, Graham JM (2007) Impact of subsoil water use on wheat yield. Australian Journal of Agricultural Research 58, 303–315.
Impact of subsoil water use on wheat yield.Crossref | GoogleScholarGoogle Scholar |

Lata C, Jha S, Dixit V, Sreenivasulu N, Prasad M (2011) Differential antioxidative responses to dehydration-induced oxidative stress in core set of foxtail millet cultivars [Setaria italica (L.)]. Protoplasma 248, 817–828.
Differential antioxidative responses to dehydration-induced oxidative stress in core set of foxtail millet cultivars [Setaria italica (L.)].Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXhsVaht7rM&md5=2f4baa2384cee2fbd3f33da6839d31b7CAS | 21197597PubMed |

Li YM (1997) Drought-resistant mechanism and genetic expression of foxtail millet. In ‘Foxtail millet breeding’. (Ed. YM Li) pp. 433–434. (China Agricultural Press: Beijing)

Li P, Brutnell TP (2011) Setaria viridis and Setaria italica, model genetic systems for the Panicoid grasses. Journal of Experimental Botany 62, 3031–3037.
Setaria viridis and Setaria italica, model genetic systems for the Panicoid grasses.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXnsFWjtbg%3D&md5=3d309779d41b6373246fb4f4dd832aa9CAS | 21459768PubMed |

Liu Z, Bai G, Zhang D, Zhu C, Xia X, Cheng R, Shi Z (2011) Genetic diversity and population structure of elite foxtail millet [Setaria italic (L.) P. Beauv.] germplasm in China. Crop Science 51, 1655–1663.
Genetic diversity and population structure of elite foxtail millet [Setaria italic (L.) P. Beauv.] germplasm in China.Crossref | GoogleScholarGoogle Scholar |

Liu Z, Zhang T, Li C, Bai G (2014) Genetic diversity and classification of cytoplasm of Chinese elite foxtail millet [Setaria italica (L.) P. Beauv.] germplasm. Crop Science 54, 659–666.
Genetic diversity and classification of cytoplasm of Chinese elite foxtail millet [Setaria italica (L.) P. Beauv.] germplasm.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2MXjtlSnu70%3D&md5=73002ec16304bf8cf84f6beb1021278dCAS |

Ludlow MM, Muchow RC (1990) A critical evaluation of traits for improving crop yields in water-limited environments. Advances in Agronomy 43, 107–153.
A critical evaluation of traits for improving crop yields in water-limited environments.Crossref | GoogleScholarGoogle Scholar |

Masle J, Gilmore SR, Farquhar GD (2005) The ERECTA gene regulates plant transpiration efficiency in Arabidopsis. Nature 436, 866–870.
The ERECTA gene regulates plant transpiration efficiency in Arabidopsis.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXnt1Siu78%3D&md5=6a8b68e9206a417dae1a10e673715498CAS | 16007076PubMed |

Merah O (2001) Potential importance of water status traits for durum wheat improvement under Mediterranean conditions. The Journal of Agricultural Science 137, 139–145.
Potential importance of water status traits for durum wheat improvement under Mediterranean conditions.Crossref | GoogleScholarGoogle Scholar |

Morison JI, Baker NR, Mullineaux PM, Davies WJ (2008) Improving water use in crop production. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 363, 639–658.
Improving water use in crop production.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXisFClsrs%3D&md5=0ada523a7174e91000950e3f855e08e4CAS | 17652070PubMed |

O’Toole JC (1982) Adaptation of rice to drought-prone environments. In ‘Drought resistance in crops with emphasis on rice’. pp. 195–213. (International Rice Research Institute: Los Baños, Philippines)

Passioura JB (1977) Grain yield, harvest index and water use of wheat. Journal of the Australian Institute of Agricultural Science 43, 117–120.

Peng S, Krieg DR (1992) Gas exchange traits and their relationship to water use efficiency. Crop Science 32, 386–391.
Gas exchange traits and their relationship to water use efficiency.Crossref | GoogleScholarGoogle Scholar |

Qie L, Jia G, Zhang W, Schnable J, Shang Z, Li W, Liu B, Li M, Chai Y, Zhi H, Diao X (2014) Mapping of quantitative trait locus (QTLs) that contribute to germination and early seedling drought tolerance in the interspecific cross Setaria italica × Setaria viridis. PLoS One 9, e101868
Mapping of quantitative trait locus (QTLs) that contribute to germination and early seedling drought tolerance in the interspecific cross Setaria italica × Setaria viridis.Crossref | GoogleScholarGoogle Scholar | 25033201PubMed |

Ratnakumar P, Vadez V, Nigam SN, Krishnamurthy L (2009) Assessment of transpiration efficiency in peanut (Arachis hypogaea L.) under drought by lysimetric system. Plant Biology 11, 124–130.
Assessment of transpiration efficiency in peanut (Arachis hypogaea L.) under drought by lysimetric system.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXlslajsrc%3D&md5=8403a0656f4a906e5d10cbe5c879e840CAS | 19778376PubMed |

Rebetzke GJ, Condon AG, Richards RA, Farquhar GD (2002) Selection for reduced carbon isotope discrimination increases aerial biomass and grain yield of rainfed bread wheat. Crop Science 42, 739–745.
Selection for reduced carbon isotope discrimination increases aerial biomass and grain yield of rainfed bread wheat.Crossref | GoogleScholarGoogle Scholar |

Rizza F, Ghashghaie J, Meyer S, Matteu L, Mastrangelo AM, Badeck FW (2012) Constitutive differences in water use efficiency between two durum wheat cultivars. Field Crops Research 125, 49–60.
Constitutive differences in water use efficiency between two durum wheat cultivars.Crossref | GoogleScholarGoogle Scholar |

Schneider KA, Rosales-Serna R, Ibarra-Perez F, Cazares- Enriquez B, Acosta-Gallegos JA, Ramirez-Vallejo P, Wassimi N, Kelly JD (1997) Improving common bean performance under drought stress. Crop Science 37, 43–50.
Improving common bean performance under drought stress.Crossref | GoogleScholarGoogle Scholar |

Seghatoleslami MJ, Kafi M, Majidi E (2008) Effect of drought stress at different growth stages on yield and water use efficiency of five proso millet (Panicum miliaceum L.) genotypes. Pakistan Journal of Botany 40, 1427–1432.

Steduto P, Hsiao TC, Fereres E (2007) On the conservative behavior of biomass water productivity. Irrigation Science 25, 189–207.
On the conservative behavior of biomass water productivity.Crossref | GoogleScholarGoogle Scholar |

Upadhyaya HD, Pundir RPS, Gowda CLL, Reddy VG, Singh S (2009) Establishing a core collection of foxtail millet to enhance the utilization of germplasm of an underutilized crop. Plant Genetic Resources; Characterization and Utilization 7, 177–184.
Establishing a core collection of foxtail millet to enhance the utilization of germplasm of an underutilized crop.Crossref | GoogleScholarGoogle Scholar |

Upadhyaya HD, Ravishankar CR, Narasimhudu Y, Sarma NDRK, Singh SK, Varshney SK, Reddy VG, Singh S, Parzies HK, Dwivedi SL, Nadaf HL, Sahrawat KL, Gowda CLL (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research 124, 459–467.
Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement.Crossref | GoogleScholarGoogle Scholar |

Urrea CA, Yonts CD, Lyon DJ, Koehler AE (2009) Selection for drought tolerance in dry bean derived from the Mesoamerican gene pool in Western Nebraska. Crop Science 49, 2005–2010.
Selection for drought tolerance in dry bean derived from the Mesoamerican gene pool in Western Nebraska.Crossref | GoogleScholarGoogle Scholar |

Vadez V, Rao S, Kholova J, Krishnamurthy L, Kashiwagi J, Ratnakumar P, Sharma KK, Bhatnagar-Mathur P, Basu PS (2008) Roots research for legume tolerance to drought: quo vadis? Journal of Food Legumes 21, 77–85.

Vadez V, Krishnamurthy L, Hash CT, Upadhyaya HD, Borrell AK (2011) Yield, transpiration efficiency, and water-use variations and their interrelationships in the sorghum reference collection. Crop & Pasture Science 62, 645–655.
Yield, transpiration efficiency, and water-use variations and their interrelationships in the sorghum reference collection.Crossref | GoogleScholarGoogle Scholar |

Vadez V, Kholova J, Medina S, Aparna K, Anderberg H (2014) Transpiration efficiency: new insights into an old story. Journal of Experimental Botany 65, 6141–6153.
Transpiration efficiency: new insights into an old story.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2MXitl2gsb8%3D&md5=769c28c0feda8629c0a31078527a49cfCAS | 24600020PubMed |

Vetriventhan M, Upadhyaya HD, Anandakumar CR, Senthilvel S, Parzies HK, Bharathi A, Varshney RK, Gowda CLL (2012) Assessing genetic diversity, allelic richness and genetic relationship among races in ICRISAT foxtail millet core collection. Plant Genetic Resources 10, 214–223.
Assessing genetic diversity, allelic richness and genetic relationship among races in ICRISAT foxtail millet core collection.Crossref | GoogleScholarGoogle Scholar |

Wang C, Chen J, Zhi H, Yang L, Li W, Wang Y, Li H, Zhao B, Chen M, Diao X (2010) Population genetics of foxtail millet and its wild ancestor. BMC Genetics 11, 90
Population genetics of foxtail millet and its wild ancestor.Crossref | GoogleScholarGoogle Scholar | 20937104PubMed |

Wang J, Wang Z, Yang H, Yuan F, Guo E, Tian G, Yuanhuai AN, Li H, Wang Y, Diao X, Guo P (2013) Genetic analysis and preliminary mapping of a highly male-sterile gene in foxtail millet (Setaria italica L. Beauv.) using SSR markers. Journal of Integrative Agriculture 12, 2143–2148.
Genetic analysis and preliminary mapping of a highly male-sterile gene in foxtail millet (Setaria italica L. Beauv.) using SSR markers.Crossref | GoogleScholarGoogle Scholar |

Wasson AP, Richards RA, Chatrath R, Misra SC, Prasad SV, Rebetzke GJ, Kirkegaard JA, Christopher J, Watt M (2012) Traits and selection strategies to improve root systems and water uptake in water-limited wheat crops. Journal of Experimental Botany 63, 3485–3498.
Traits and selection strategies to improve root systems and water uptake in water-limited wheat crops.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38XotVSit7c%3D&md5=01a293b67d8f7fce555988d37abb1b44CAS | 22553286PubMed |

Westgate ME, Passioura JB, Munns R (1996) Water status and ABA content of floral organs in drought-stressed wheat. Australian Journal of Plant Physiology 23, 763–772.
Water status and ABA content of floral organs in drought-stressed wheat.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK2sXms1GgsA%3D%3D&md5=4eebb2fb97f787baa4166618b5dc5c36CAS |

Yang X, Wan Z, Perry L, Lu H, Wang Q, Zhao C, Li J, Xie F, Yu J, Cui T, Wang T, Li M, Ge Q (2012) Early millet use in northern China. Proceedings of the National Academy of Sciences of the United States of America 109, 3726–3730.
Early millet use in northern China.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38XjvFymsLc%3D&md5=a1064fcdbb58b80f938ddf567258cc4dCAS | 22355109PubMed |

Yuan A, Hou A, Zhang F, Guo Y (2008) Inheritance and effects of the photoperiod sensitivity in foxtail millet (Setaria italica P. Beauv). Hereditas 145, 147–153.
Inheritance and effects of the photoperiod sensitivity in foxtail millet (Setaria italica P. Beauv).Crossref | GoogleScholarGoogle Scholar |

Zhang JP, Liu TS, Zheng J, Jin Z, Zhu Y, Guo JF, Wang GY (2007) Cloning and characterization of a putative 12-oxophytodienoic acid reductase cDNA induced by osmotic stress in roots of foxtail millet. DNA Sequence 18, 138–144.
Cloning and characterization of a putative 12-oxophytodienoic acid reductase cDNA induced by osmotic stress in roots of foxtail millet.Crossref | GoogleScholarGoogle Scholar | 17364825PubMed |

Zhang W, Zhi H, Liu B, Xie J, Li J, Li W, Jia G, Wang Y, Li H, Chai Y, Li Y, Diao X (2012) Screening of indexes for drought tolerance test at booting stage in foxtail millet. Plant Genetic Resources 13, 765–772.

Zooleh HH, Jahansooz MR, Yunusa I, Hosseini SMB, Chaichi MR, Jafari AA (2011) Effect of alternate irrigation on root-divided foxtail millet (Setaria italica). Australian Journal of Crop Science 5, 205–213.