Register      Login
Soil Research Soil Research Society
Soil, land care and environmental research
RESEARCH ARTICLE

The Australian three-dimensional soil grid: Australia’s contribution to the GlobalSoilMap project

R. A. Viscarra Rossel A F , C. Chen A , M. J. Grundy B , R. Searle C , D. Clifford D and P. H. Campbell E
+ Author Affiliations
- Author Affiliations

A CSIRO Land and Water, PO Box 1666, Canberra, ACT 2601, Australia.

B CSIRO Agriculture, Queensland Biosciences Precinct, 306 Carmody Rd, St Lucia, QLD 4067, Australia.

C CSIRO Land and Water, Ecosciences Precinct, GPO Box 2583, Brisbane, Qld 4001, Australia.

D CSIRO Digital Productivity, Ecosciences Precinct, GPO Box 2583, Brisbane, Qld 4001, Australia.

E CSIRO Information Management & Technology, GPO Box 1538, Hobart, Tas. 7001, Australia.

F Corresponding author. Email: raphael.viscarra-rossel@csiro.au

Soil Research 53(8) 845-864 https://doi.org/10.1071/SR14366
Submitted: 14 December 2014  Accepted: 4 June 2015   Published: 25 September 2015

Abstract

Information on the geographic variation in soil has traditionally been presented in polygon (choropleth) maps at coarse scales. Now scientists, planners, managers and politicians want quantitative information on the variation and functioning of soil at finer resolutions; they want it to plan better land use for agriculture, water supply and the mitigation of climate change land degradation and desertification. The GlobalSoilMap project aims to produce a grid of soil attributes at a fine spatial resolution (approximately 100 m), and at six depths, for the purpose. This paper describes the three-dimensional spatial modelling used to produce the Australian soil grid, which consists of Australia-wide soil attribute maps. The modelling combines historical soil data plus estimates derived from visible and infrared soil spectra. Together they provide a good coverage of data across Australia. The soil attributes so far include sand, silt and clay contents, bulk density, available water capacity, organic carbon, pH, effective cation exchange capacity, total phosphorus and total nitrogen. The data on these attributes were harmonised to six depth layers, namely 0–0.05 m, 0.05–0.15 m, 0.15–0.30 m, 0.30–0.60 m, 0.60–1.00 m and 1.00–2.00 m, and the resulting values were incorporated simultaneously in the models. The modelling itself combined the bootstrap, a decision tree with piecewise regression on environmental variables and geostatistical modelling of residuals. At each layer, values of the soil attributes were predicted at the nodes of a 3 arcsecond (approximately 90 m) grid and mapped together with their uncertainties. The assessment statistics for each attribute mapped show that the models explained between 30% and 70% of their total variation. The outcomes are illustrated with maps of sand, silt and clay contents and their uncertainties. The Australian three-dimensional soil maps fill a significant gap in the availability of quantitative soil information in Australia.

Additional keywords: GlobalSoilMap, digital soil mapping, spatial modelling, Cubist, kriging, spatial uncertainty, three-dimensional mapping, Australia.


References

Adhikari K, Kheir R, Greve M, Bøcher P, Malone B, Minasny B, McBratney A, Greve M (2013) High-resolution 3-d mapping of soil texture in Denmark. Soil Science Society of America Journal 77, 860–876.

Ballabio C, Panagos P, Montanarella L (2014) Spatial prediction of soil properties at European scale using the LUCAS database as an harmonization layer. In ‘GlobalSoilMap: Basis of the global spatial soil information system’. pp. 35–40. (CRC Press)

Bishop T, McBratney A, Laslett G (1999) Modelling soil attribute depth functions with equal-area quadratic smoothing splines. Geoderma 91, 27–45.

Bivand R, Pebesma E, Gómez-Rubio V (2013) ‘Applied spatial data: analysis with R.’ 2nd edn (Springer: New York)

Bui E (2006) A review of digital soil mapping in Australia. In ‘Digital soil mapping. An introductory perspective. Developments in soil science’. (Eds P Lagacherie, A McBratney, M Voltz) pp. 25–37. (Elsevier Science & Technology)

Bui E, Henderson B, Viergever K (2009) Using knowledge discovery with data mining from the Australian soil resource information system database to inform soil carbon mapping in Australia. Global Biogeochemical Cycles 23, GB4033

Clifford D, Dobbie M, Searle R (2014) Non-parametric imputation of properties for soil profiles with sparse observations. Geoderma 232–234, 10–18.

DAFF (2010) Land use of Australia, version 4, 2005–06.

de Caritat P, Lech M, McPherson A (2008) Geochemical mapping ‘down under’: selected results from pilot projects and strategy outline for the National Geochemical Survey of Australia. Geoscience Australia, Australian Government. pp. 301–312.

Donohue R, McVIicar T, Roderick M (2009) Climate-related trends in Australian vegetation cover as inferred from satellite observations, 1981–2006. Global Change Biology 15, 025–1039.

Efron B, Tibshirani R (1993) ‘An introduction to the bootstrap.’ (Chapman and Hall: London)

Farr T, Rosen P, Caro E, Crippen R, Duren R, Hensley S, Kobrick M, Paller M, Rodriguez E, Roth L, Seal D, Shaffer S, Shimada J, Umland J, Werner M, Oskin M, Burbank D, Alsdorf D (2007) The shuttle radar topography mission. Reviews of Geophysics 45, RG2004

Gallant J, Wilson N, Dowling T, Read A, Inskeep C (2011) SRTM-derived 3 second Digital Elevation Models User Guide. Geoscience Australia, Australian Government. Available at: www.ga.gov.au/topographic-mapping/digital-elevation-data.html

Gallant JC, Dowling TI (2003) A multiresolution index of valley bottom flatness for mapping depositional areas. Water Resources Research 39,

Gessler PE, Moore ID, McKenzie NJ, Ryan PJ (1995) Soil-landscape modelling and spatial prediction of soil attributes. International Journal of Geographical Information Systems 9, 421–432.

Grundy MJ, Viscarra Rossel RA, Searle RD, Wilson PL, Chen C, Gregory LJ (2015) The Soil and Landscape Grid of Australia. Soil Research 53, 835–844.

Hartemink AE, Krasilnikov P, Bockheim J (2013) Soil maps of the world. Geoderma 207–208, 256–267.

Hastie T, Tibshirani R, Friedman J (2009) ‘The elements of statistical learning: data mining, inference and prediction.’ Springer Series in Statistics. (Springer)

Henderson B, Bui E, Moran C, Simon D (2005) Australia-wide predictions of soil properties using decision trees. Geoderma 124, 383–398.

Hengl T, de Jesus J, MacMillan R, Batjes N, Heuvelink G, Ribeiro E, Samuel-Rosa A, Kempen B, Leenaars J, Walsh M, Gonzalez M (2014) Soilgrids1km–global soil information based on automated mapping. PLoS ONE 9, e105992

Isbell R (2002) ‘The Australian Soil Classification.’ revised edn (CSIRO Publishing: Melbourne)

Johnston R, Barry S, Bleys E, Bui E, Moran C, Simon DP, Carlile P, McKenzie N, Henderson B, Chapman G, Imhoff M, Maschmedt D, Howe D, Grose C, Schoknecht N, Powell B, Grundy M (2003) Asris: the database. Soil Research 41, 1021–1036.

Kempen B, Heuvelink G, Brus D, Walvoort D (2014) Towards globalsoilmap.net products for the Netherlands. In ‘GlobalSoilMap: Basis of the global spatial soil information system’. (Eds D Arrouays, N McKenzie, J Hempel, A de Forges, A McBratney) pp. 85–90. (CRC Press)

Kuhnert P, Henderson A-K, Bartley R, Herr A (2010) Incorporating uncertainty in gully erosion calculations using the random forests modelling approach. Environmetrics 21, 493–509.

Landsat (2010) Landsat multi-spectral imagery, courtesy of the U.S. Geological Survey. http://earthexplorer.usgs.gov

Lin LI-K (1989) A concordance correlation coefficient to evaluate reproducibility. Biometrics 45, 255–268.

Lymburner L, Tan P, Mueller N, Thackway R, Lewis A, Thankappan M, Randall L, Islam A, Senarath U (2011) Dynamic land cover dataset version 1. www.auscover.org.au/xwiki/bin/view/Product+pages/Product+User+Page+GA+1

Malone B, McBratney A, Minasny B, Laslett G (2009) Mapping continuous depth functions of soil carbon storage and available water capacity. Geoderma 154, 138–152.

Marchant B, Viscarra Rossel R, Webster R (2013) Fluctuations in method-of-moments variograms caused by clustered sampling and their elimination by declustering and residual maximum likelihood estimation. European Journal of Soil Science 64, 401–409.

McBratney A, Mendonça Santos M, Minasny B (2003) On digital soil mapping. Geoderma 117, 3–52.

McKenzie N, Jacquier D, Ashton L, Cresswell H (2000) Estimation of soil properties using the atlas of Australian soils. Technical Report 11/00, CSIRO Land and Water, Canberra, ACT.

McKenzie N, Ryan P (1999) Spatial prediction of soil properties using environmental correlation. Geoderma 89, 67–94.

Milligan P, Franklin R, Ravat D (2004) A new generation magnetic anomaly grid database of Australia (magda)–use of independent data increases the accuracy of long wavelength components of continental-scale merges. Australian Society of Exploration Geophysicist’s Magazine

Minty B, Franklin R, Milligan P, Richardson L, Wilford J (2009) The radiometric map of Australia. In ‘20th International Geophysical Conference and Exhibition’. (Australian Society of Exploration Geophysicists: Adelaide)

Moore I, Gessler P, Nielsen G, Peterson G (1993) Soil attribute prediction using terrain analysis. Soil Science Society of America Journal 57, 443–452.

Moran C, Bui E (2002) Spatial data mining for enhanced soil map modelling. International Journal of Geographical Information Science 16, 533–549.

Northcote K, Beckmann G, Bettenay E, Churchward H, Van Dijk D, Dimmock G, Hubble G, Isbell R, McArthur W, Murtha G, Nicolls K, Paton T, Thompson C, Webb A, Wright M (1960–1968) ‘Atlas of Australian soils, sheets 1 to 10.’ (Melbourne University Press: Melbourne)

Poggio L, Gimona A (2014) National scale 3D modelling of soil organic carbon stocks with uncertainty propagation–An example from Scotland. Geoderma 232–234, 284–299.

Prescott J (1950) A climatic index for the leaching factor in soil formation. Journal of Soil Science 1, 10–19.

Quinlan J (1992) Learning with continuous classes. In ‘Proceedings AI’92, 5th Australian Conference on Artificial Intelligence’. (Eds A Adams, L Sterling) pp. 343–348. (World Scientific: Singapore)

Rayment G, Lyons D (2011) ‘Soil chemical methods – Australasia.’ (CSIRO Publishing: Melbourne)

Sanchez PA, Ahamed S, Carré F, Hartemink AE, Hempel J, Huising J, Lagacherie P, McBratney AB, McKenzie NJ, Mendonça-Santos M, Minasny B, Montanarella L, Okoth P, Palm CA, Sachs JD, Shepherd KD, Vågen T-G, Vanlauwe B, Walsh MG, Winowiecki LA, Zhang G-L (2009) Digital soil map of the world. Science 325, 680–681.

Scull P, Franklin J, Chadwick OA, McArthur D (2003) Predictive soil mapping: a review. Progress in Physical Geography 27, 171–197.

Searle R (2014) The Australian site data collation to support the globalsoilmap. In ‘GlobalSoilMap: Basis of the global spatial soil information system’. (Eds D Arrouays, N McKenzie, J Hempel, AR de Forges, AB McBratney) pp. 127–132. (CRC Press)

Stein J (2008) Metadata: Environmental attributes compiled for the continental gdm analysis. Technical Report, Fenner School of Environment and Society, The Australian National University, Canberra, ACT.

Team GD (2012) Geographic resources analysis support system (GRASS) software, version 6.4.1. http://grass.osgeo.org

Team RDC (2008) R: A language and environment for statistical computing. www.R-project.org

Viscarra Rossel R, Bui E, de Caritat P, McKenzie N (2010) Mapping iron oxides and the color of Australian soil using visible–near-infrared reflectance spectra. Journal of Geophysical Research – Earth Surface 115, F04031

Viscarra Rossel R, Chen C (2011) Digitally mapping the information content of visible–near infrared spectra of surficial Australian soils. Remote Sensing of the Environment 115, 1443–1455.

Viscarra Rossel R, Webster R (2012) Predicting soil properties from the Australian soil visible–near infrared spectroscopic database. European Journal of Soil Science 63, 848–860.

Viscarra Rossel R, Webster R, Bui E, Baldock J (2014) Baseline map of organic carbon in Australian soil to support national carbon accounting and monitoring under climate change. Global Change Biology 20, 2953–2970.

Viscarra Rossel R, Webster R, Kidd D (2013) Mapping gamma radiation and its uncertainty from weathering products in a Tasmanian landscape with a proximal sensor and random forest kriging. Earth Surface Processes and Landforms 39, 735–748.

Viscarra Rossel RA (2011) Fine-resolution multiscale mapping of clay minerals in Australian soils measured with near infrared spectra. Journal of Geophysical Research – Earth Surface 116, F04023

Webster R, Oliver MA (2007) ‘Geostatistics for environmental scientists.’ 2nd edn. (John Wiley & Sons, Ltd.)

Xu T, Hutchinson M (2011) ANUCLIM Version 6.1. Fenner School of Environment and Society, Australian National University, Canberra, ACT.

Zhou X-H, Gao S (1997) Confidence intervals for the log-normal mean. Statistics in Medicine 16, 783–790.