Marine and Freshwater Research Marine and Freshwater Research Society
Advances in the aquatic sciences

Marine and Freshwater Research

Marine and Freshwater Research

Marine and Freshwater Research is a multidisciplinary journal publishing original research and reviews on all aquatic environments and subject areas. Read more about the journalMore

Editor-in-Chief: Max Finlayson

Publishing Model: Hybrid. Open Access options available.

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Current Issue

Marine and Freshwater Research

Volume 71 Number 3 2020

RESEARCH FRONT: Keith Hunter Dedication

MFv71n3_EDKeith Hunter’s legacy to Marine Science in New Zealand

Michael J. Ellwood 0000-0003-4288-8530, Philip W. Boyd, Christopher E. Cornwall, Peter Croot, Kim I. Currie, Russell D. Frew, Catriona L. Hurd, Cliff Law, Peter S. Liss, Christina M. McGraw, Luke M. Mosley, Sylvia G. Sander, Claudine Stirling and Rebecca Zitoun
pp. i-iii

MF19267Ocean acidification as a multiple driver: how interactions between changing seawater carbonate parameters affect marine life

Catriona L. Hurd, John Beardall, Steeve Comeau, Christopher E. Cornwall, Jonathan N Havenhand, Philip L. Munday, Laura M. Parker, John A. Raven and Christina M. McGraw
pp. 263-274

Ocean acidification (OA) is the ongoing change to seawater chemistry caused by oceanic uptake of increasing levels of atmospheric carbon dioxide. ‘Multiple drivers’ is the term used to describe the cumulative effects of multiple environmental factors on organisms or ecosystems. We propose that OA acts as a multiple driver, and discuss how simultaneously changing seawater properties interact to affect vulnerable marine life, including fish, shellfish, seaweeds, coralline algae, phytoplankton and corals.


Increasing concentrations of seawater carbon dioxide, called ocean acidification, could benefit some species of seaweed. Certain seaweed that can use only carbon dioxide, and not the more abundant bicarbonate, are prime candidates to benefit. We demonstrated that, in general, these species that can use only carbon dioxide respond positively to ocean acidification, although some variability exists among species’ responses.

MF19222NZOA-ON: the New Zealand Ocean Acidification Observing Network

J. M. Vance 0000-0002-5134-815X, K. I. Currie, C. S. Law, J. Murdoch and J. Zeldis
pp. 281-299

The New Zealand Ocean Acidification Observing Network (NZOA-ON) has been developed to inform the scientific and economic challenges that New Zealand is facing in response to more acidic ocean waters. Remote field sites are distributed across New Zealand coastal waters to better understand how ocean chemistry is changing in response to increasing atmospheric carbon dioxide and how ecosystems will be affected.


Estuaries are complex geochemical reactors that can greatly modify the delivery of dissolved and suspended material from rivers to the ocean. Understanding how metal pollutants behave in estuarine environments is important to protecting very high environmental and socioeconomic values (e.g. fisheries and recreation). This paper reviews how salinity, particle aggregation and pH changes affect metal dynamics in estuaries.

MF19213Importance of refractory ligands and their photodegradation for iron oceanic inventories and cycling

Christel Hassler, Damien Cabanes, Sonia Blanco-Ameijeiras, Sylvia G. Sander and Ronald Benner
pp. 311-320

We identified refractory dissolved organic molecules with traceable chemical signatures as the bulk of iron-biding ligands found at depth. Refractory molecules had limited bioavailability to phytoplankton. However, when upwelled and photochemically degraded, inorganic bioavailable iron was liberated, which can potentially sustain primary productivity.

MF19167A unique temperate rocky coastal hydrothermal vent system (Whakaari–White Island, Bay of Plenty, New Zealand): constraints for ocean acidification studies

R. Zitoun, S. D. Connell, C. E. Cornwall 0000-0002-6154-4082, K. I. Currie, K. Fabricius, L. J. Hoffmann, M. D. Lamare, J. Murdoch, S. Noonan, S. G. Sander, M. A. Sewell, N. T. Shears, C. M. G. van den Berg and A. M. Smith
pp. 321-344

CO2 vents have been proposed as potential analogues to investigate the effects of ocean acidification on natural ecosystems. Here we present a preliminary evaluation of the suitability of the temperate CO2 vents at Whakaari–White Island (New Zealand) as natural study sites in the Southern Hemisphere. We conclude that these vents represent a unique ecosystem with considerable biogeochemical complexity and recommend care in their use as a model of the future ocean.

MF19216Strong seasonality in the cadmium and phosphate cycling at the subtropical convergence, south-eastern New Zealand

R. D. Frew, T. Adu, M. Gault-Ringold, A. Hamidian, K. I. Currie, E. Armstrong and K. A. Hunter
pp. 345-354

The marine cycling of Cd is intriguing because it mimics the essential nutrient phosphorus (P), except at the subtropical convergence (STC). Here, we present a 3-year time series of field measurements of Cd and P concentration across the STC, New Zealand. Cadmium concentration exhibits extreme seasonality (50×), much larger than do other bio-utilised elements. The timing of the drawdown implies a biological role for Cd.

MF19200Some observations on the biogeochemical cycling of zinc in the Australian sector of the Southern Ocean: a dedication to Keith Hunter

Michael J. Ellwood, Robert Strzepek, Xiaoyu Chen, Thomas W. Trull and Philip W. Boyd
pp. 355-373

This study investigated the distribution of dissolved and particulate zinc and its isotopes in the Subantarctic Zone. Zinc had a longer regeneration length scale than phosphorus and cadmium, but a shorter one than copper. In addition, the isotope composition of dissolved and particulate zinc was affected by chemical (complexation), biological (uptake and regeneration), physical (mixing and particle sinking) and seasonal variations acting in concert.


This paper focuses on taxonomy and habitat distribution of groundwater copepods in South-east Asia. We list 48 species from 22 genera documented from groundwater and groundwater-dependent habitats across the region that exhibit higher local endemicity compared to regional scale. A high number of species can still be discovered if more intensive sampling efforts and collaborative work are undertaken in the future.

MF18412Long-term monitoring of potamodromous migratory fish larvae in an undammed river

Rafael Rogério Rosa, Jislaine Cristina Silva and Andréa Bialetzki
pp. 384-393

The dourado Salminus brasiliensis can migrate over 200 km to reproduce in the Ivinheima River and its tributaries, indicating favourable local conditions for migration and spawning. In addition, the species exhibits differential use of biotopes for reproduction, including rivers and backwaters (spawning) and lagoons (refuge and growth). The dourado is a key species for conservation, so ensuring its reproductive success means maintaining a balanced ecological structure.


The ocean wave climate of Victoria, Australia, was analysed using 31 years of hindcast data. Wave height and period are highest on the west coast, decrease within Bass Strait, then increase eastwards to New South Wales. Wave direction is most variable on the east coast. The Southern Annular Mode and El Niño–Southern Oscillation both influence wave climate and storm frequency.

MF19089Presence of Remora remora on Mobula birostris in Revillagigedo National Park, Mexico

E. E. Becerril-García, M. A. Gutiérrez-Ortiz, P. A. Preciado-González and A. Ayala-Bocos
pp. 414-417

This research explored, for the first time, interactions between mantas and remoras in a marine park in the Mexican Pacific. The aim was to provide general information about the preference of the remoras for this vulnerable species of mantas, because knowledge of both species is still scarce in the area. Ecological implications regarding this interaction are discussed.

Online Early

The peer-reviewed and edited version of record published online before inclusion in an issue

Published online 04 March 2020

MF19259Patchy distribution of phyto- and zooplankton in large and shallow lagoon under ice cover and resulting trophic interactions

R. Kornijów 0000-0001-8110-1310, M. Karpowicz, J. Ejsmont-Karabin, L. Nawrocka, E. de Eyto, K. Grzonkowski, A. Magnuszewski, A. Jakubowska, T. Wodzinowski and A. Wozniczka
 

Plankton surveys of ice-covered temperate coastal lagoons are rarely conducted, probably due to logistical difficulties. In this study we surveyed plankton in the Baltic Vistula Lagoon while it was covered in ice in 2018. Environmental conditions were determined by freshwater and marine influences, and were related to the patchy distribution of both phyto- and zooplankton. There was a positive correlation between the biomass of phyto- and zooplankton.

Published online 02 March 2020

MF18481Ephemeral effects of El Niño southern oscillation events on an eastern tropical Pacific coral community

R. Cruz-García, A. P. Rodríguez-Troncoso 0000-0001-6243-7679, F. A. Rodríguez-Zaragoza, A. Mayfield and A. L. Cupul-Magaña
 

Coral-reef ecosystems have been continuously affected by stress conditions, causing bleaching and death, allowing other competitors from the reef to use such space. We evaluated the short- and long-term changes in the cover of three reef coral genera over multi-year periods, some with abnormal temperature. Results showed that anomalies caused an ephemeral decrease in coral cover, with a remarkable presence of coralline algae. However, the communities eventually returned to their coral-dominated state, suggesting that these reef habitats are resilient to such episodes of abnormal seawater temperature.

Published online 28 February 2020

MF19224Antibiotic pollution and risk assessment under different cultivation modes in aquaculture ponds of the Taihu Lake Basin, China

Yan Yan, Yang Deng, Min Ji, Xiaoguang Xu 0000-0003-2952-7212, Limin Zhang and Guoxiang Wang
 

We have studied the antibiotic pollution in fish, crab–shrimp and crab ponds around Taihu Lake Basin, China. We also evaluated a risk assessment of antibiotics with regard to organisms.

Published online 27 February 2020

MF19385Giant trevally (Caranx ignobilis) of Hawaiian Islands can live 25 years

Allen H. Andrews 0000-0002-9001-8305
 

Giant trevally (Caranx ignobilis) are an iconic reef fish common to tropical and subtropical waters from South Africa to Hawaii. Despite their broad range, importance as a top predator and attraction among anglers, the growth and lifespan remain largely undescribed. In this study, giant trevally were aged up to 25 years using otolith (ear stone) growth rings and bomb radiocarbon dating.

Published online 25 February 2020

MF19149Multiscale relationships between stream temperature and juvenile recruitment in an imperilled freshwater fish

Mischa P. Turschwell 0000-0002-6307-9604, Ben Stewart-Koster, Stephen R. Balcombe, Fran Sheldon and Erin E. Peterson
 

We explored how different abiotic drivers interacted to affect recruitment in the river blackfish. We found that temperature was the primary variable that determined recruitment success, whereby highest recruitment happened in cooler streams. In addition, temperature was found to interact with riparian cover, with the highest recruitment found in cooler streams that also had high riparian cover.

Published online 21 February 2020

MF19313Temperature dependency equation for chub mackerel (Scomber japonicus) identified by a laboratory rearing experiment and microscale analysis

Masahiro Nakamura 0000-0003-2628-2141, Michio Yoneda, Toyoho Ishimura, Kotaro Shirai, Masaki Tamamura and Kozue Nishida
 

We determined the linear relationship between otolith δ18O and rearing water temperature for chub mackerel. The species-specific temperature-dependency equation for chub mackerel in this paper will enable accurate reconstruction of individual thermal histories and provide essential information for efficient conservation.

Published online 13 February 2020

MF19214Effects of dietary shifts on the stable isotope signature of Pacific white shrimp Litopenaeus vannamei and implications for traceability

Li Li 0000-0002-4130-5113, Natalee Kokkuar, Cui Han, Wenjing Ren and Shuanglin Dong
 

This study investigated how differences in carbon and nitrogen isotopes in food sources could affect these values in shrimp. The time needed for isotope values in shrimp to stabilise after a dietary shift was determined, and correlations between isotope values in feed and shrimp were calculated. The results will help refine stable isotope traceability technology.

Published online 13 February 2020

MF19280Age validation of four rockfishes (genera Sebastes and Sebastolobus) with bomb-produced radiocarbon

Craig Kastelle 0000-0002-6681-1602, Thomas Helser, Todd TenBrink, Charles Hutchinson, Betty Goetz, Chris Gburski and Irina Benson
 

Determining the age of rockfish is difficult. Their otoliths (ear stones) have growth zones that are difficult to count. Hence, we used bomb-produced radiocarbon to confirm fish age independently. In redstripe rockfish there was a small probability of underageing; in harlequin rockfish there was a large probability that the fish were underaged; and in shortspine thornyhead and shortraker rockfish, the bomb-produced radiocarbon was probably not an effective tool.

Published online 11 February 2020

MF19184Shark-catch composition and seasonality in the data-poor small-scale fisheries of the southern Gulf of Mexico

Juan Carlos Pérez-Jiménez, Armando Wakida-Kusunoki, Chrystian Hernández-Lazo and Manuel Mendoza-Carranza 0000-0001-8216-2115
 

The Gulf of Mexico is highly diverse in natural resources. However, some areas, especially the southern Gulf of Mexico remain understudied. Current research has provided new information for ~19 shark species at Campeche Bank, with 70% being threatened or endangered. Many species use this area for reproduction and nursery, such as the bull shark an endangered species. We found an interesting seasonal pattern in shark fishery.

Published online 11 February 2020

MF19301Shark and ray community structure in a turbid, nearshore coral reef habitat

Arthur Yon 0000-0002-6230-972X, Mark G. Meekan, Samantha Andrzejaczek, Sarah Martinez and Conrad W. Speed
 

The coastline of northern Australia may be a refuge for elasmobranchs threatened throughout their former ranges in South-East Asia. In this study, baited underwater videos were used to document elasmobranch communities in the Cobourg Marine Park. Overall, the abundance and diversity were high compared with other turbid environments of northern Australia. A predominance of juveniles may also indicate the presence of a nursery.

Published online 04 February 2020

MF18376Drivers of cyanobacterial blooms in lakes and reservoirs in Jinan City, China

C. S. Zhao, X. Pan, S. T. Yang, X. L. Wang, X. J. Liu, Y. Sun, Y. Yang and T. L. Pan
 

Understanding how topography and human activities affect cyanobacterial dominance and blooms can effectively protect water ecological health. Based on the dominant species in the cyanobacteria community, key driving environmental factors were identified. Further spatial classification found topography and human activities were highly correlated with the key driving factors. The results can provide references for cyanobacterial bloom prevention across the world.

Published online 04 February 2020

MF19062China's coastal-wetland change analysis based on high-resolution remote sensing

Yin Gao, Lijuan Cui, Jianjun Liu, Wei Li and Yinru Lei
 

A spatial knowledge-constrained manual method combined with high-resolution images was adopted for interpretation of China’s coastal wetlands. The results showed that, during the past 6 years, 12 types of coastal wetlands in China had undergone a decrease in distribution. Coastal reclamation was obvious in Bohai Bay, Yancheng tidal and Hangzhou Bay. Farming reclamation mainly occupied mudflats, shallow sea, tidal flats and estuaries waters.


Algal symbionts play a critical role in the energy budget of the coral. In this study, we demonstrate that the algal symbionts are significantly affected at temperatures below when visual coral bleaching signs are observed. It is clear that our current understanding of bleaching has overlooked what is happening to the symbiosis before bleaching is visually evident on coral reefs.


Callianassid shrimp residing in deep burrows have large effects on marine soft-sediment environment and benthic community. In light of top-down forcing in communities, substantial predation impacts on shrimp populations may cause various knock-on effects. This study revealed aspects of stingray feeding on shrimp and provided a substantial approximation to the decline of a shrimp population due to the predation impact.

Published online 31 January 2020

MF19157Sample extraction and liquid chromatography–tandem mass spectrometry (LC-MS/MS) method development and validation for the quantitative detection of cyanobacterial hepatotoxins and neurotoxins in Singapore's reservoirs

Feras Abbas, Cristina Porojan, Maxine A. D. Mowe, Mary Lehane, Simon M. Mitrovic, Richard P. Lim, Darren C. J. Yeo and Ambrose Furey
 

Cyanobacterial ‘blue–green algal’ toxins are produced by some harmful algal blooms (HABs). To investigate the prevalence of cylindrospermopsin (CYN) and anatoxin-a (ANA) in Singapore’s reservoirs, a hazard analysis was initiated to profile the CYN and ANA levels present. The dominant cyanobacteria genera during that 12-month period (November 2012–2013) were Cylindrospermopsis, Planktolyngbya, Pseudanabaena and Microcystis.

Published online 31 January 2020

MF18432Survey of microcystins in Singapore's reservoirs using liquid chromatography–tandem mass spectrometry (LC-MS/MS)

Cristina Porojan, Feras Abbas, Maxine A. D. Mowe, Mary Lehane, Simon M. Mitrovic, Richard P. Lim, Darren C. J. Yeo and Ambrose Furey
 

Microcystins (MCs) are a group of toxins produced by certain cyanobacteria that occur naturally in fresh waters and can cause acute poisoning in humans and animals. A comprehensive survey was undertaken over a 12-month period in 17 reservoirs from November 2012 to October 2013 and determined that toxin levels were primarily well below the WHO provisional MC-LR drinking water guideline.

Published online 30 January 2020

MF19153In situ target strength measurement of the black triggerfish Melichthys niger and the ocean triggerfish Canthidermis sufflamen

Julie Salvetat 0000-0003-4697-0806, Anne Lebourges-Dhaussy, Paulo Travassos, Sven Gastauer, Gildas Roudaut, Gary Vargas and Arnaud Bertrand
 

Triggerfish play an important ecological role in tropical ecosystems. By combining acoustic and video observation, we open up the field for direct biomass estimation. In addition, oceanic triggerfish assemble around fish aggregating devices used by tuna fisheries. We show that the acoustic response of triggerfish and small tuna overlap, preventing their acoustic discrimination, which may lead to high rates of bycatch.


This report is the first published, detailed description of white sharks attacking and killing a live humpback whale (Megaptera novaeangliae). New behaviours were exhibited, including those that have previously only been described in pinniped-related white shark feeding events.

Published online 29 January 2020

MF19255Research on Spartina alterniflora using molecular biological techniques: an overview

Lu Xia, Wen Yang, Qifang Geng, Nasreen Jeelani and Shuqing An
 

Spartina alterniflora Loisel. is a coastal invasive species, and biological invasion is a global issue. In this article, previous studies investigating S. alterniflora using molecular biological techniques that have contributed to our understanding of the competitive advantage and invasion mechanism of S. alterniflora are summarised from the individual, population and application perspectives.

Published online 29 January 2020

MF19281Fish in the matrix: effects of landscape on community-structure patterns of the ichthyofauna of streams in Cerrado

Thiago Bernardi Vieira 0000-0003-1762-8294, Leandro Schlemmer Brasil 0000-0002-2725-9181, Naiara Raiol Torres 0000-0003-1446-6760, Tatiana Lima de Melo 0000-0002-9917-8815, Elto Aparecido Moreira, Rogério Pereira Bastos 0000-0002-5978-3244 and Karina Dias-Silva 0000-0001-5548-4995
 

Our findings showed that change in land use and cover (natural vegetation to pasture) benefits some generalist species such as Phenacorhamdia somnians. Additionally, we observed that streams located in forests present the highest species richness, followed by streams in pasturelands and eucalypt matrices. We did not observe differences in the composition of fishes among the three matrices (pasture, natural vegetation and eucalypts).

Published online 28 January 2020

MF19177Early evidence of microplastics on seagrass and macroalgae

Nicholas Seng, Samantha Lai, Jenny Fong, Muhammad Faiq Saleh, Clement Cheng, Zi Yu Cheok and Peter A. Todd
 

This study documents early evidence of microplastics attached to several species of macrophytes (seaweeds and seagrasses) by measuring the amount of microplastic adhered to their surfaces. Microplastics can enter the food web when herbivores graze on these contaminated macrophytes.

Published online 21 January 2020

MF19163Walking, swimming or hitching a ride? Phylogenetics and biogeography of the walking shark genus Hemiscyllium

Christine L. Dudgeon, Shannon Corrigan, Lei Yang, Gerry R. Allen, Mark V. Erdmann, Fahmi, Hagi Y. Sugeha, William T. White and Gavin J. P. Naylor
 

In this study, we explore the likely sequence of events responsible for the radiation of walking sharks in the genus Hemiscyllium using a dated molecular phylogeny. The nine currently recognised species in the genus consist of small, benthic sharks with limited dispersal. Our findings support recent speciation in this genus over the last 10 million years, mediated by major tectonic, geological and oceanographic historical processes.

Published online 20 January 2020

MF19025Soil seed banks and restoration potential of tussock sedge meadows after farming in Changbai Mountain, China

Ming Wang, Shengzhong Wang, Guodong Wang and Ming Jiang
 

Soil seed banks are important components of ecological restoration, particularly if seeds of key structural dominants can survive periods of cultivation. We found that the key structural Carex was missing in farmed sedge meadows, although other important wetland species survived cultivation as seeds. This study provides important insights into biodiversity restoration of farmed sedge meadows.

Published online 17 January 2020

MF19110Turnover is replaced by nestedness with increasing geographical distance in bacterial communities of coastal shallow lakes

Marla Sonaira Lima 0000-0001-9972-5033, Fabiana Schneck 0000-0002-0018-444X, Ng Haig They 0000-0003-4132-2703, Luciane Oliveira Crossetti, Juliana Elisa Bohnenberger, Katherine D. McMahon and David da Motta Marques
 

We studied the relative importance of bacterial β-diversity components (turnover and nestedness) in 25 shallow lakes. Turnover was predominantly due to environmental filters, but was replaced by nestedness with increasing geographical distance between lakes due to dispersal limitation and differences in richness due to wind-driven mass effects.

Published online 14 January 2020

MF18472Historical dynamics of the demersal fish community in the East and South China Seas

Jin Gao 0000-0001-7474-4684, James T. Thorson, Cody Szuwalski and Hui-Yu Wang
 

The East and South China seas are important fishing grounds with very limited publicly available data. We digitised historical records of catch and effort from government fishery reports for nine commercial species caught by otter trawl, and reported quarterly from 1970 to 2001, from Taiwan to illuminate species and community changes in this region. We found substantial spatial, temporal and spatiotemporal variation in the distribution of fishes and season-specific patterns.

Published online 09 January 2020

MF19289Mangrove planting on dredged material: three decades of nature-based coastal defence along a causeway in the Arabian Gulf

Paul L. A. Erftemeijer, Titus Agastian, Hiroshi Yamamoto, Marion L. Cambridge, Roderik Hoekstra, Geoff Toms and Satoshi Ito
 

Half a million mangrove seedlings were planted over 30 years along an artificial causeway of dredged material in the Arabian Gulf, which was showing signs of erosion. Plantings resulted in 16.5 ha of successfully established mangroves along ~7 km of shoreline. Survival rates of ~30% increased markedly when planting sites were established in tidal channels excavated along the causeway, ensuring appropriate tidal inundation.

Published online 07 January 2020

MF19242Biodiversity, trait composition and ecological functioning: impacts of coastal urbanisation on subtropical mudflats

Navodha G. Dissanayake, Christopher L. J. Frid and Bryony A. Caswell 0000-0001-8488-0890
 

We assessed the structure and biological characteristics or ‘traits’ of macrofauna from 24 south-east Queensland mudflats to determine the impacts of urbanisation on ecological functioning. Overall, when indexed as a proportion of subcatchment area, no clear effect was apparent, but mudflats from subcatchments producing organic wastes differed in structure. Under current enrichment functioning was conserved; however, compensation may cease as pressures increase.

Published online 06 January 2020

MF19069Stable carbon and nitrogen isotope evidence for the low biomagnification of mercury in marine fish from the South China Sea

Wenfeng Zhang, Weixiong Huang, Xiao Chen, Xingfen Yang and Xiaoguang Yang
 

Marine fish are a major source of human and seabird exposure to methylmercury. Mercury concentrations vary according to the trophic level of commercially important marine fish from South China Sea. In this study, low biomagnification of mercury in the fish food chain is demonstrated in the South China Sea, and factors related to mercury concentrations are discussed.

Published online 18 December 2019

MF19126Current velocity, temperature and oil thickness as determinants of the refloating process of stranded oil in the Bohai Sea

Yue Yu 0000-0002-1142-1375, Zhixin Qi, Xinping Yu, Wenxin Li, Sinan Fu and Deqi Xiong
 

A series of experiments conducted in a flow-through tank revealed that current velocity, temperature and oil thickness significant affect the refloating process of an oil patty. Furthermore, an empirical model was introduced and found to be closely consistent with the experimental data. The results can be widely used in practice.

Published online 16 December 2019

MF19147Diversity and habitat segregation of mangrove grapsoid crabs along the west coast of the Malay Peninsula

Laura Ribero, Phaik Eem Lim, Rosli Ramli and Gianluca Polgar
 

Grapsoid assemblages were surveyed in six mangrove sites in the Malay Peninsula. Species composition differed among sites with different types of substrate and forest area. Most species appear to be stenotopic or have patchy distribution. Management actions should consider the marked variability in species composition and environmental factors, to prevent local extinctions of species and sustainably manage these ecosystems ecological diversity.

Published online 16 December 2019

MF19237Assessing methods for restoring seagrass (Zostera muelleri) in Australia

Nele Svenja Wendländer, Troels Lange, Rod M. Connolly, Erik Kristensen, Ryan M. Pearson, Thomas Valdemarsen and Mogens R. Flindt
 

The seagrass Zostera muelleri has, in recent decades, declined massively along the eastern coastline of Australia. To restore this important marine plant, we tested multiple techniques for transplanting mature adult seagrass shoots. Results showed that transplantation works best when shoots are anchored and bioturbating animals are excluded. However, in areas where grazing fish are present, the transplanted shoots should be further protected by placement of cages above the shoots.

Published online 10 December 2019

MF18471Correlating ecotoxicological early-warning systems to biotic indices to assess riverine teratogenic contamination

Alessandra Cera 0000-0002-5296-8991, Simona Ceschin, Floriano Del Grosso, Lorenzo Traversetti and Massimiliano Scalici
 

We explored a multilevel approach to providing a monitoring tool to detect teratogens dissolved in waters by extending the potential of tracking human-mediated detrimental environmental changes using overlapping information from short-term responses in an embryo toxicological assay based on freshwater polyps and two biotic indices based on plants and invertebrates. The findings show that the embryo toxicological assay may be considered a good early-warning system of potential teratogenic threats.

Published online 10 December 2019

MF19079Resistance to degradation and effect of the herbicide glyphosate on the bacterioplankton community of a large river system dominated by agricultural activities

Claudia Piccini 0000-0002-2762-1953, Stefano Fazi, Germán Pérez, Giampiero Batani, Gabriela Martínez de la Escalera and José Roberto Sotelo-Silveira
 

After incubating river water with carbon-13-labelled glyphosate for 6 days, we found significant shifts in bacterioplankton community composition. Bacterial richness and diversity were decreased in the 100 µg L–1 glyphosate treatment, where 1.2% of glyphosate was converted to AMPA and a significant enrichment of carbon-13 in the bacterial biomass was detected. These results suggest that glyphosate in the water is likely more resistant to degradation than reported.

Published online 09 December 2019

MF19171Relationship of biological communities to habitat structure on the largest remnant flat oyster reef (Ostrea angasi) in Australia

C. Crawford, G. Edgar, C. L. Gillies and G. Heller-Wagner
 

A study of biological communities associated with the last known remaining native flat oyster reefs, in north-eastern Tasmania, Australia, found that they contained greater biodiversity of fishes and invertebrates and three times the abundance compared with surrounding soft sediment sites. These diverse animal assemblages were probably lost when oyster reefs disappeared around southern Australia after European settlement.

Published online 06 December 2019

MF19173Effects of shading on seagrass morphology and thermal optimal of productivity

Eunice Kong, Yan Xiang Ow 0000-0003-4659-4951, Samantha Lai, Siti Maryam Yaakub and Peter Todd
 

Halophila ovalis was subjected to shading treatments for 12 weeks to investigate the effects of reduced light level on seagrass morphology, chlorophyll concentration and optimal temperatures for net productivity. Shaded seagrasses experienced reductions in shoot density and leaf size, and increases in chlorophyll concentration. The range of optimal temperatures for net productivity did not vary with light availability.

Published online 03 December 2019

MF19109Simulation of different fishery regulations to prevent population decline in a large freshwater invertebrate, the Murray crayfish (Euastacus armatus)

Jamin P. Forbes 0000-0003-4034-4003, Charles R. Todd 0000-0003-0550-0349, Lee J. Baumgartner 0000-0002-1237-5163, Robyn J. Watts, Wayne A. Robinson 0000-0002-8793-7466, Aldo S. Steffe, Jeff J. Murphy, Martin W. Asmus and Jason D. Thiem
 

Murray crayfish (Euastacus armatus) were historically abundant in Australia’s Murray–Darling Basin, but river regulation, pollution and overfishing have reduced their range and abundance. Angler surveys quantified recreational catch, effort and harvest of crayfish in the Murrumbidgee River, which were then used to predict likely outcomes from changing harvest regulations. The model predicted that the change to a harvest-slot length limit would stabilise the population in the first 25 years and slowly increase it thereafter.

Published online 29 November 2019

MF19207Costs and benefits of towed videos and remotely operated vehicles for sampling shallow reef habitats and fish

T. R. Davis, G. Cadiou, J. Williams and M. A. Coleman
 

Two low-cost (less than A$10 000) commercially available towed video and remotely operated vehicles were compared for their abilities to collect photographs of marine habitats and videos of fish assemblages. Both systems performed equally well for these purposes, but towed video was simpler to operate and required significantly less time to collect data.

Published online 27 November 2019

MF19065Diatom–water quality thresholds in South Australian streams indicate a need for more stringent water quality guidelines

J. Tibby 0000-0002-5897-2932, J. Richards, J. J. Tyler, C. Barr, J. Fluin and P. Goonan
 

This study shows that current thresholds designed to protect the health of streams in South Australia need to be more stringent. We used a type of algae known as diatoms to assess whether the concentration of salt and phosphorus affected the species found in South Australian streams. The species composition changed at salinity and phosphorus concentrations well below existing thresholds.


Samples from 15 farms were used in the present study and analysed by nine microsatellite DNA loci. High heterozygosity and polymorphism information content values were obtained. The genetic differentiation was small, suggesting genetic homogeneity among hatchery-produced offspring. The most immediate and effective conservation priority should be maintaining the current genetic diversity.

Published online 27 November 2019

MF18381Monitoring of cyanobacteria for water quality: doing the necessary right or wrong?

M. Moustaka-Gouni, U. Sommer, M. Katsiapi and E. Vardaka
 

Cyanobacteria are an influential and widely acknowledged biological component of lake water quality assessment. Nevertheless, there are gaps in the monitoring of cyanobacteria. In this article we review widespread problems in the use of cyanobacteria in Water Framework Directive-related water quality assessment (i.e. exclusion of taxa, mucilage carbon of the colonial species, sampling depth) and suggest solutions to optimise water quality assessment.


We provide the first age, growth and age at sexual maturity estimates of the herbivorous fish Kyphosus bigibbus, which is widely distributed in all oceans. By improving techniques for otolith section preparation, we estimated age more accurately than by using scales. This species has a long reproductive lifespan, and recruitment may increase rapidly after noticeable losses of kelp forests.

Published online 14 November 2019

MF19072Reproductive ecology of the witch guitarfish Zapteryx xyster Jordan & Evermann, 1896 (Chondrichtyes: Trygonorrhinidae) in the Gulf of Tehuantepec, Mexican Pacific

A. M. Torres-Huerta, E. Cruz-Acevedo, P. E. Carrasco-Bautista, J. F. Meraz-Hernando, E. J. Ramírez-Chávez, M. Tapia-García and A. Gracía
 

The witch guitarfish is caught incidentally in bottom trawl nets used in the shrimp fishery in the Gulf of Tehuantepec. Adults are probably concentrated at depths >60 m in the Gulf of Tehuantepec during most of the year and migrate towards shallow waters (from 25 to 37 m) to reproduce in February. The incidental catch of witch guitarfish during its reproductive cycle using bottom trawl nets could negatively affect the reproductive success and long-term viability of this species.

Published online 13 November 2019

MF19124Field observations of the dinoflagellate genus Azadinium and azaspiracid toxins in the south-west Atlantic Ocean

Elena Fabro, Gastón O. Almandoz, Bernd Krock and Urban Tillmann
 

The first record of azaspiracid (AZA)-2 in plankton samples from Argentinean waters is presented herein, together with the first detection of Azadinium obesum in the southern hemisphere and four other Azadinium species, of which two are potentially toxigenic. The diversity, wide latitudinal distribution and high abundances of Azadinium plus the detection of AZA-2 found in this study highlights the potential risk of AZA shellfish contamination episodes in the south-west Atlantic Ocean.

Published online 12 November 2019

MF18430C3 and C4 plant leaf breakdown and assimilation by aquatic macroinvertebrates in streams of the Brazilian Atlantic Forest

Fernanda G. Augusto, Aline F. Figueiredo, Plinio B. Camargo, Luciana D. Coletta, Edmar A. Mazzi and Luiz A. Martinelli
 

We compared aquatic leaf breakdown between an arboreal and a grass species in two streams of the Brazilian Atlantic Forest, one draining mostly forests and the other draining mostly pasture lands. Grass breakdown was faster than that of arboreal plants in the forest stream, but not in the pasture stream. In both streams, aquatic invertebrates assimilated more forest leaves than grass leaves.

Published online 12 November 2019

MF19122Demographics of the endemic and threatened small cyprinid Pethia setnai from the Northern Western Ghats, India

M. SriHari 0000-0002-2935-5257, Y. Gladston, S. M. Ajina, G. B. Sreekanth, Rajeev Raghavan and A. K. Jaiswar
 

Indigo barb Pethia setnai is one of the endemic fish species present in the Western Ghats of India. This species is currently exploited from the wild for the ornamental fish trade. This study is the first report of the population dynamics of this endemic cyprinid and will help in planning future sustainable management practices.


In the past two decades, half of the once oligotrophic lakes of Montebello, Chiapas, have been affected by eutrophication, which has led to many changes in water quality and ecological interactions. We found a marked change in dominance in turbid lakes and that the relationship between turbidity and richness is unimodal, consistent with the intermediate productivity theory.


A review of trace elements and hydrocarbon contamination in Australian sea port environments revealed marked trace metal (As, Cu, Pb, Cd, Zn and Ni) contamination in the water and sediments of Port Derwent, Port Kembla, Port Botany Bay and Port Newcastle, and polychlorinated biphenyls, dichlorodiphenyltrichloroethane and chlordane contamination in the aquatic biota at Port Jackson and Port Brisbane.

Published online 28 October 2019

MF18197Habitat value of Sydney rock oyster (Saccostrea glomerata) reefs on soft sediments

I. M. McLeod 0000-0001-5375-4402, L. Boström-Einarsson, C. Creighton, B. D'Anastasi, B. Diggles 0000-0002-9377-080X, P. G. Dwyer 0000-0001-6099-7138, L. Firby, A. Le Port, A. Luongo, F. Martínez-Baena 0000-0002-0898-3633, S. McOrrie, G. Heller-Wagner and C. L. Gillies
 

We describe the structure of eight remnant Sydney rock oyster (Saccostrea glomerata) reefs and estimate the density, biomass, productivity and composition of mobile macroinvertebrate and infaunal communities associated with them. The oyster reefs had a distinct assemblage of macroinvertebrates, with fivefold higher biomass and almost fivefold higher productivity than adjacent bare sediments.

Published online 28 October 2019

MF19172Oceanic and coastal populations of a harvested macroinvertebrate Rochia nilotica in north-western Australia are isolated and may be locally adapted

Oliver Berry 0000-0001-7545-5083, Zoe Richards, Glenn Moore 0000-0003-2413-5260, Udhi Hernawan, Mike Travers and Bernd Gruber
 

Trochus are large tropical marine snails that are collected across the Indo-Pacific region for their beautiful mother of pearl shells, but are often overharvested. This investigation used genetics to measure how often trochus larvae are transported between coastal reefs and offshore atolls in north-western Australia. Results confirm that such movement is rare, and so separate management of these regions is appropriate.

Published online 24 October 2019

MF19016Comparison of high-throughput sequencing analysis of gut contents between silver carp Hypophthalmichthys molitrix and bighead carp Hypophthalmichthys nobilis in mesotrophic and eutrophic lakes

Chaoqun Su, Wenjing Hu, Zhongjun Hu, Zhen Zhang, Oranich Wedchaparn, Liangjie Zhao and Qigen Liu
 

The diet composition of silver carp and bighead carp in two lakes with varying productivity was investigated by high-throughput sequencing analysis. Silver carp feed primarily on phytoplankton and exhibit feeding selectivity. Bighead carp feed primarily on zooplankton, but exhibit a dietary shift to phytoplankton with increasing levels of algae. Gaining knowledge of the feeding habits of planktivorous fish can provide insights into the management of water eutrophication problems.


This study revealed differences in the ecological role of soft-substrate tide pools between estuary and coastal tidal flats. The different types of tidal flat play different roles for groups of transient species, but similar roles for residents. Accordingly, we should consider not only species diversity, but also habitat use patterns of individual species through their life history when evaluating habitat value.

Published online 23 October 2019

MF19181Impoundment led to spatial trophic segregation of three closely related catfish species in the Three Gorges Reservoir, China

Chuansong Liao, Sibao Chen, Sandra Bibiana Correa, Wei Li, Tanglin Zhang and Jiashou Liu
 

Impoundment of the Yangtze River formed the largest reservoir in the world and led to spatial and seasonal fluctuations in food availability for native fish. In less than a decade, dietary plasticity facilitated the adaptation of three generalist catfish species to the novel habitats formed by the dam. This study enhances understanding of mechanisms that allow generalist species to maintain co-occurring populations in such dramatically changing habitats.

Published online 23 October 2019

MF19101Assessment of fish vulnerability to climate change in the Yellow Sea and Bohai Sea

Yunlong Chen, Xiujuan Shan, Ning Wang, Xianshi Jin, Lisha Guan, Harry Gorfine, Tao Yang and Fangqun Dai
 

The effects of climate on fish in the Bohai Sea and Yellow Sea were evaluated, and highly vulnerable fish species were identified. Nearly half the dominant fish species were highly vulnerable, whereas 84% of species were at high impact risk. Miichthys miiuy was found to have the highest impact risk, whereas Acropoma japonicum had the lowest. Demersal fishes tended to be more vulnerable than pelagic fishes.

Published online 22 October 2019

MF19193Spatial distribution and substrate preferences of the non-indigenous amphipod Gammarus roeselii Gervais, 1835

Daniele Paganelli, Alessandra Pandolfi, Renato Sconfietti and Agnese Marchini
 

Gammarus roeselii is one of the successful non-indigenous species recently established in the Ticino River basin. In this study we assessed the spatial distribution of this amphipod in the secondary hydrographic system of the southern part of the sub-lacustrine Ticino River basin and examined substrate preferences on the basis of laboratory experiments.


The cyanobacterium Microcystis aeruginosa produces the liver toxin microcystins, as well as a variety of other potentially harmful compounds. This study identified genes associated with the production of nine different compounds spanning four chemical classes in 27 strains. The results highlight the potential chemical diversity within this species and will be valuable for designing holistic genetic tests for water quality.

Published online 11 October 2019

MF18487Lethal and sublethal effects of simultaneous exposure to hypoxia and aluminium on juvenile eastern school prawn

Catherine McLuckie, Natalie Moltschaniwskyj, Troy Gaston, R. Hugh Dunstan, Marcus Crompton and Matthew D. Taylor
 

The survival of eastern school prawn increased significantly with increasing dissolved oxygen concentrations. Total fatty acid and amino acid concentrations were significantly greater in prawns subjected to hypoxia, regardless of aluminium exposure, with differences in fatty acid and amino acid profiles attributed to docosahexaenoic acid, stearic acid, palmitic acid and behenic acid (fatty acids) and leucine, isoleucine, phenylalanine and asparagine (amino acids).

Published online 11 October 2019

MF19029Evidence of site fidelity and deep diving behaviour of scalloped hammerhead shark (Sphyrna lewini) around the Saint Peter and Saint Paul Archipelago, in the equatorial Mid-Atlantic ridge

Natalia P. A. Bezerra, Bruno C. L. Macena, Paulo Travassos, Pedro Afonso and Fábio H. V. Hazin
 

Using satellite telemetry, this paper unravels aspects of the horizontal and vertical movements of scalloped hammerhead sharks (Sphyrna lewini) for the first time in the equatorial and south Atlantic Ocean and helps fill the gap on the species’ ecology.

Published online 09 October 2019

MF19066Teleost community composition and the role of herbivory on the intertidal reef of a small isolated island in north-west Australia

Cindy Bessey, John K. Keesing, James McLaughlin, Max Rees, Mark Tonks, Gary A. Kendrick and Ylva S. Olsen 0000-0003-4498-7057
 

We sampled fish and evaluated herbivory on the reef platform at Browse Island, 200 km off north-western Australia. We found 99 fish species, 18 of which are known to eat turf, but only 4 that eat macroalgae. Fish were eating turf on the reef, but we found no evidence they were eating macroalgae. This may make the reef more vulnerable to overgrowth of algae in the future.

Published online 07 October 2019

MF19100Reproductive dynamics, age and growth of Astyanax aff. fasciatus in a Neotropical basin

Estevan L. Silveira 0000-0002-4603-894X, José M. R. Aranha, Márcia S. Menezes and André M. Vaz-dos-Santos 0000-0003-0620-9537
 

Population dynamics provide crucial information for management and conservation. In this study we analysed the spatiotemporal patterns in reproductive biology, age and growth of Astyanax aff. fasciatus from a Neotropical river affected by human activities. The reproductive behaviour of the species was not homogeneous along the river due to geomorphology and human activities in surrounding areas, with some sites becoming unavailable for breeding.

Published online 01 October 2019

MF19095Predation on eggs of the apple snail Pomacea dolioides (Reeve, 1856) in rural and urban areas of the Amazon

Aldeiza M. Fonseca and Bruno S. Sant'Anna
 

Populations of the apple snail Pomacea dolioides are more affected by egg predation in rural areas of the Amazon than in urban areas. In urban areas, it is likely that human action and subsequent changes in the natural environment are favouring the reproductive success of P. dolioides by reducing egg predation. The main predators of the eggs of P. dolioides were the ants Solenopsis invicta and Crematogaster cf. carinata.


Analysis of a long-term tag–recapture dataset for Australian east-coast snapper (Chrysophrys auratus) indicated they are largely resident on a decadal time scale and at reasonably small spatial scales. However, the population exhibited ‘partial migration’, whereby a small percentage of fish moved considerable distances (up to 1000 km). Growth rates of recaptured fish were affected by latitude, with higher growth rates at lower (more northern) latitudes.

Published online 26 September 2019

MF18449Seasonal variations in plankton trophic structure under highly eutrophic conditions

Mariana Guenther, Alejandro E. S. F. Costa, Valdylene T. Pessoa-Fidelis and Sigrid Neumann-Leitão
 

The plankton trophic structure determines how efficiently energy is transferred through aquatic food webs. We evaluated the seasonal dynamics of phytoplankton, microzooplankton and mesozooplankton in a well-mixed, highly polluted tropical estuary and, based on their interactions, proposed a conceptual trophic model for the plankton community. Rainfall is the most important environmental variable in this system and microzooplankton play a key role in its food web.

Published online 24 September 2019

MF19055Bioaccumulation and health risk assessment of polycyclic aromatic hydrocarbons in oyster (Crassostrea sp.) and gastropod (Cymatium sp.) species from the Can Gio Coastal Wetland in Vietnam

Luu Thanh Pham, Thuy Thanh Thi Hoang, Loan Cam Thi Tu, Yen Hoang Thi Tran, Bao Duy Le, Dong Van Nguyen, Huy Xuan Do and Nam Van Thai
 

This study provides information on the bioaccumulation and potential health risks of polycyclic aromatic hydrocarbons (PAHs) in oysters and gastropods collected from the Can Gio Coastal Wetland, Vietnam. The results indicate that both oysters and gastropods contained PAHs, especially those collected from port sites, but there is no current risk to humans due to oyster and gastropod consumption.

Published online 24 September 2019

MF19191Shark longline fishery of Papua New Guinea: size and species composition and spatial variation of the catches

William T. White, Leontine Baje, Sharon A. Appleyard, Andrew Chin, Jonathan J. Smart and Colin A. Simpfendorfer
 

Detailed size and sex compositions were obtained from catches of the shark longline fishery in Papua New Guinea. Silky sharks were the dominant shark caught in this fishery, constituting more than 90% of the catches. Misidentifications of species by observers was low (~10%) reflecting the use of regional identification guides and observers who are well trained.


The reproductive strategy of the small-spotted catshark was studied based on both macroscopic and microscopic observations of the reproductive tract in 2253 individuals sampled as bycatch in Hellenic waters (eastern Mediterranean Sea). The species exhibited a K-selective strategy, and information regarding its reproductive period, size at maturity, fecundity, morphometrics of oocytes and egg cases and somatic indices is presented and discussed.

Published online 13 September 2019

MF18422Eutrophication in the Neva Estuary (Baltic Sea): response to temperature and precipitation patterns

Mikhail Golubkov 0000-0002-6808-5421 and Sergey Golubkov
 

Weather variables affect eutrophication indicators in estuaries. We tested the hypothesis that cool and rainy weather in midsummer has a stronger stimulatory effect on indicators of eutrophication in the Neva Estuary than warm weather. The analysis showed that total phosphorus and chlorophyll concentrations and primary production in the estuary were positively correlated with the amount of precipitation and the number of rainy days in the region.

Published online 13 September 2019

MF19205Use of a novel acoustic 'listening' method for detecting pump impellor strike on downstream migrating eels

B. O. David 0000-0001-8284-1820, M. Lake, M. K. Pine, J. Smith and J. A. T. Boubée
 

Fish mortality through floodplain pumping stations is a recognised global issue, but few studies have quantified the impact of such infrastructure. This study aimed to use passive acoustic monitoring to record and identify the sounds generated when fish move through pumping stations. It is envisaged that this tool has application not only in quantifying eel mortality, but also as an early detection tool to illicit and test an appropriate management response.

Published online 11 September 2019

MF18221Patterns of dark respiration in aquatic systems

Mustafa Mantikci 0000-0002-9492-2166, Peter A. Staehr, Jørgen L. S. Hansen and Stiig Markager
 

Oxygen consumption in the aquatic environment is often assumed to be constant over time in the dark. Here we report non-constant respiration rate on the basis of analysis of a diverse dataset and describe how the patterns in respiration rate vary with the community structure and the trophic status of the ecosystems. These findings will help us better understand carbon cycling in the aquatic ecosystem.


Catch data from commercial fisheries can provide an indicator of stock status. Naïve, univariate and multivariate time series models of monthly catch per unit effort were developed for King George whiting, snapper and southern calamari. Predictive models that included seasonality or environmental variables performed the best, particularly for species that are vulnerable to fishing during short phases in their life history or for which intra-annual variation in abundance occurs through environmental variability.

Published online 10 September 2019

MF19030Hyperspectral inversion of Suaeda salsa biomass under different types of human activity in Liaohe Estuary wetland in north-eastern China

Zhiguo Dou, Youzhi Li, Lijuan Cui, Xu Pan, Qiongfang Ma, Yilan Huang, Yinru Lei, Jing Li, Xinsheng Zhao and Wei Li
 

Human activities alter the growth of coastal wetland vegetation. In the present study, we showed that the use of canopy hyperspectral data can reveal the biomass of Suaeda salsa under the influence of different types of human activity. This study provides technical support for the use of quantitative remote sensing-based methods to monitor the fragile ecology of coastal wetlands under the influence of human activities.

Published online 06 September 2019

MF19088Historical analysis of blue marlin (Makaira nigricans Lacepède, 1802) catches by the pelagic longline fleet in the eastern Pacific Ocean

Emigdio Marín-Enríquez 0000-0002-5007-9357, Leonardo A. Abitia-Cárdenas, Xchel G. Moreno-Sánchez and Jorge S. Ramírez-Pérez
 

We analysed a historic database of blue marlin catch. We used a numerical model to evaluate the effects of marine climate indexes in the variations of blue marlin catch. These variations are more affected by operational changes in the longline fishery than by variations in marine climate. Blue marlin catch showed an important decrease from the early 2000s, and the causes of this decline should be investigated.

Published online 06 September 2019

MF18445Molecular evidence of three species in the Pseudocaranx dentex complex (Carangidae) in Australian waters

Douglas Bearham 0000-0002-2977-2843, Myrto Robert, Jennifer A. Chaplin, Glenn I. Moore 0000-0003-2413-5260, David V. Fairclough and Andrea Bertram
 

We investigated the number and distribution of trevally species in the Pseudocaranx dentex complex in Australian waters. We found one species (P. sp. ‘dentex’) that shows close affinities with trevallies from southern Africa and the Mediterranean Sea, another (P. georgianus) that is widespread in southern Australia and a third (P. dinjerra) from deep water in Western Australia. These results will facilitate the management of harvested stocks of this complex.

Published online 06 September 2019

MF19159Food source as a factor determining birds' exposure to hazardous organic pollutants and egg contamination

Andrzej R. Reindl and Lucyna Falkowska
 

Alimentary exposure is the main factor determining halogenated organic compound pollution of wildlife. Comparisons of two aquatic environments, namely marine coast (Gdansk Bay) and an inland reservoir (Włocławek Dam on the Vistula River), indicated significant differences in contamination of birds’ eggs. Concentrations of polychlorinated dibenzo-p-dioxins and furans as well as polychlorinated biphenyls were similar but TEQ were several times higher in fish eating birds. The same was observed for hexabromocyclododecane isomers

Published online 06 September 2019

MF18466Planktivorous fish positively select Daphnia bearing advanced embryos

Jana Zemanová, Michal Šorf 0000-0002-9368-6421, Josef Hejzlar, Vanda Šorfová and Jaroslav Vrba
 

Large Cladocera species are considered as keystone species in many freshwater ecosystems. Fish predation usually reduces their populations, with a cascading effect on phytoplankton biomass. A mesocosm experiment suggested that an intentional elimination of Daphnia females with more visible advanced embryos can strengthen the top-down effect of fish predation on reproduction success of daphnids and, therefore, decelerate their population growth.

Published online 02 September 2019

MF18429Hyperspectral remote sensing monitoring of cyanobacteria blooms in a large South American reservoir: high- and medium-spatial resolution satellite algorithm simulation

A. Drozd, P. de Tezanos Pinto, V. Fernández, M. Bazzalo, F. Bordet and G. Ibañez
 

Remote sensing constitutes a tool to complement field monitoring of massive growths of cyanobacteria (blooms). In a South American reservoir with recurrent blooms, we obtained 75 hyperspectral signatures in the field under conditions of cyanobacteria dominance. We used the field signatures to simulate signatures in seven satellites, and developed mathematical formulas (algorithms) for each satellite to estimate the number of cyanobacterial cells in the field.

Published online 02 September 2019

MF18491Metabarcoding demonstrates dietary niche partitioning in two coexisting blackfish species

Gavin N. Rees 0000-0002-5270-8559, Michael E. Shackleton, Garth O. Watson, Georgia K. Dwyer and Rick J. Stoffels
 

Managing a fish population often requires understanding its diet, which involves many hours spent using a microscope to examine the contents of the fish guts. We used a DNA-technique that rapidly identified the prey of two species of blackfish that can cohabit zones of rivers. We showed that some prey were consumed by both species, but other prey were only present in one of the species. Different diets can allow two species to coexist.


Cyanobacteria can undergo rapid proliferation and lead to hazardous environmental conditions, including the production of toxins. Anatoxin-a and its analogues are cyanobacterial neurotoxins that have been found globally. This study examined their occurrence in various surface waterbody types and organisms around the world and associated aquatic toxicity, and identified research needs for understanding exposure conditions and risks for wildlife and humans.


Food availability, competition, predation and salinity affect the survival and growth of aquatic invertebrates, such as rotifers. Brachionus plicatilis (saline) and Brachionus calyciflorus (freshwater) coexist in Salado River basin waterbodies (Argentina) depending on particular conditions. The findings of this study indicate that B. calyciflorus is more adversely affected than B. plicatilis by competition and high salinity, which explains how both species can coexist.

Published online 20 August 2019

MF19022Nesting ecology of flatback sea turtles Natator depressus from Delambre Island, Western Australia

Michele Thums, Jason Rossendell, Rebecca Fisher and Michael L. Guinea
 

In this study we assessed how often flatback turtles returned to nest and the environmental cues they use to time their nesting attempts. Turtles nested every 13 days within a season and returned to nest every 2 years on average within ~450 m of their previous nesting location. Turtles preferred to nest on the least exposed side of the island and when air temperature and humidity were lowest and tides were highest.

Published online 20 August 2019

MF18417Using network analysis to identify keystone species in the food web of Haizhou Bay, China

Jiaying Wu, Yang Liu, Haozhi Sui, Binduo Xu, Chongliang Zhang, Yiping Ren and Ying Xue
 

Studies on keystone species will contribute to the understanding of community stability and mechanisms underlying ecosystem degradation. Leptochela gracilis, Loligo sp., Larimichthys polyactis, Alpheus japonicus and Oratosquilla oratoria were identified as keystone species in the Haizhou Bay food web, and their absence may have considerable effects on the complexity and stability of the Haizhou Bay food web. This study provides a scientific basis for the protection of maintenance of ecosystem health in Haizhou Bay.


The coupling of a dynamic energy budget (DEB) model with an integral projection model (IPM) is a promising new method to predict the population-level dynamics of species based on individuals. We present a DEB-IPM to describe the dynamics of a population of individuals. The predicted demographic rates were well within observed ranges, and fit within average recorded values, and captured known seasonal trends.

Published online 19 August 2019

MF19038What happens in the darkness? Seasonal variations in tropical benthic fish assemblages

C. Duarte 0000-0002-1036-5850, H. M. V. Espírito-Santo, J. Zuanon, L. H. Rapp Py-Daniel and C. P. Deus
 

This study used a sampling strategy designed to examine the relationship between the seasonality of a tropical river and community structure, using data from Amazonian benthic fish assemblages. It was found that species composition varies seasonally, and these differences may suggest a narrow relationship between the benthic ichthyofauna inhabiting the main channel and the marginal wetlands.

Published online 19 August 2019

MF19047Early life history of tropical freshwater eels (Anguilla spp.) recruiting to Viti Levu, Fiji Islands, in the western South Pacific

C. A. Hewavitharane, T. D. Pickering, C. Rico 0000-0002-0822-336X and N. Mochioka
 

Lay summary. To gather information on oceanic life histories and possible differences in spawning times and locations of freshwater eels in the western South Pacific, otoliths of three species occurring in Fiji were studied. Significant differences between the life histories of all three species were observed. Furthermore, separate peak seasonal spawning periods for each of the three species was revealed.

Published online 06 August 2019

MF18361Dynamics of nitrogen-fixing cyanobacteria with heterocysts: a stoichiometric model

James P. Grover, J. Thad Scott, Daniel L. Roelke and Bryan W. Brooks
 

Cyanobacteria can cause water quality problems through excessive biomass and the production of toxins. Their ability to become abundant is aided by specialised cells (heterocysts) that obtain nitrogen from the atmosphere. A simulation model describes the dynamics of these specialised cells, of biomass and of the nutrients nitrogen and phosphorus. This model can be used to aid predictions of cyanobacterial biomass and toxins.

Published online 31 May 2019

MF18468Influence of historical inundation frequency on soil microbes (Cyanobacteria, Proteobacteria, Actinobacteria) in semi-arid floodplain wetlands

Tsuyoshi Kobayashi 0000-0002-3641-4120, Timothy J. Ralph, Pranay Sharma and Simon M. Mitrovic
 

Little is known about the response of soil microbes to changing inundation frequency in floodplain wetlands. This issue was investigated in the Macquarie Marshes, south-east Australia. We found significant differences in response among soil microbes, including Cyanobacteria. Changing inundation frequency is likely to affect wetland soil health and microbial diversity by altering the subtle balance of microbial communities.


Food web network interactions among micro-organisms induce or inhibit blooms. This paper reviews interactions between cyanobacteria, zooplankton and other micro-organisms, because these biotic interactions are not well recognised. The paper describes new areas of research, the results of which provide us with a better understanding of the processes of proliferation, migration and invasion of cyanobacteria.

Published online 14 May 2019

MF18383Pilot application of drone observations and pigment marker detection by HPLC in studies of cyanobacterial harmful algal blooms in Bulgarian inland waters

Maya P. Stoyneva-Gärtner, Blagoy A. Uzunov, Jean-Pierre Descy, Georg Gärtner, Petya H. Draganova, Cvetanka I. Borisova, Vera Pavlova and Maria Mitreva
 

This paper describes the first attempt to use a drone and marker pigments for fast determination of phytoplankton in harmful cyanobacterial bloom studies in selected Bulgarian shallow waterbodies. Microcystins, saxitoxins and cylindrospermopsin were detected in samples with the highest cyanobacterial content. Further use of drones and marker pigments in the monitoring of harmful algal blooms is recommended.

Published online 07 May 2019

MF18377Monitoring cyanobacteria occurrence in freshwater reservoirs using semi-analytical algorithms and orbital remote sensing

Henrique Dantas Borges 0000-0002-0729-5767, Rejane Ennes Cicerelli, Tati de Almeida, Henrique L. Roig and Diogo Olivetti
 

Cyanobacterial blooms pose a serious risk to human health and the environment in urban reservoirs. Monitoring these events using traditional methods can be expensive and impractical. Using remote sensing technologies, like satellite imagery, can be an effective and inexpensive alternative. In this study we show that concentrations of chlorophyll-a, a cyanobacteria indicator, can be inferred from Sentinel-2 images.

Published online 26 March 2019

MF18392Mitigating a global expansion of toxic cyanobacterial blooms: confounding effects and challenges posed by climate change

Hans W. Paerl, Karl. E. Havens, Nathan. S Hall, Timothy G. Otten, Mengyuan Zhu, Hai Xu, Guangwei Zhu and Boqiang Qin
 

Mitigating global expansion of harmful cyanobacterial blooms is a major challenge. In addition to reducing nutrient inputs and optimising hydrological controls, there is the challenge of addressing effects of climate change, including warming, more extensive droughts and extreme precipitation events. Currently used control approaches will need to be re-evaluated in light of the synergistic effects of climate change with nutrient enrichment.

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