Register      Login
Australian Journal of Botany Australian Journal of Botany Society
Southern hemisphere botanical ecosystems
RESEARCH ARTICLE (Open Access)

Maintaining separate maternal lines increases the value and applications of seed collections

Marlien M. van der Merwe https://orcid.org/0000-0003-1307-5143 A * , Jason G. Bragg A B , Richard Dimon https://orcid.org/0000-0003-1341-1450 A C , Patrick S. Fahey https://orcid.org/0000-0002-3662-809X A C , Patricia M. Hogbin A , Patricia Lu-Irving A , Allison A. Mertin A D , Maurizio Rossetto A C , Trevor C. Wilson A E and Jia-Yee Samantha Yap A
+ Author Affiliations
- Author Affiliations

A Research Centre for Ecosystem Resilience, Botanic Gardens of Sydney, Sydney, NSW 2000, Australia.

B School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, NSW 2033, Australia.

C Queensland Alliance of Agriculture and Food Innovation, University of Queensland, St Lucia, Qld 4067, Australia.

D School of BioSciences, University of Melbourne, Parkville, Vic. 3010, Australia.

E Plant Discovery and Evolution, Botanic Gardens of Sydney, Sydney, NSW 2000, Australia.


Handling Editor: Catherine Offord

Australian Journal of Botany - https://doi.org/10.1071/BT22136
Submitted: 9 December 2022  Accepted: 6 July 2023   Published online: 3 August 2023

© 2023 The Author(s) (or their employer(s)). Published by CSIRO Publishing. This is an open access article distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (CC BY-NC-ND)

Abstract

Context: Given the effort and resources that go into collecting and maintaining seed collections, it is crucial that we maximise their usefulness. Conservation, restoration and research rely heavily on good quality collections in order to establish new populations, create habitat, minimise extinction and address scientific questions.

Aims: Although seed viability, excellent metadata and genetic representativeness make for good quality collections, we provide 10 detailed reasons why the maintenance of separate maternal lines further increases the quality and usefulness of seed collections.

Key results: Maternal line seed collections can accommodate new information, this is especially important given the increasing longevity of seed collections. For example, maintaining separate maternal lines facilitates accommodation of taxonomic changes, minimises the impact of erroneous plant identifications, and facilitates separation of polyploid races, hybrids and inappropriate lineages. Separate maternal line collections also facilitate better estimates of the genetic diversity captured, and consequently better inform conservation translocations and the establishment of conservation gardens and seed orchards. Separate maternal line collections can also expedite breeding for specific traits, such as disease resistance or other selective challenges that impact on biodiversity conservation. New seed microbiome data show how only some maternal lines contain pathogenic fungi, reminding seed collectors and collections managers that contamination can be better contained by keeping each maternal line separate.

Conclusions and implications: Maintaining separate maternal lines is a simple and effective way to increase the value of seed collections for multiple applications.

Keywords: biodiversity, breeding, conservation collections, disease management, germplasm collections, hybridisation, inbreeding, kinship, restoration ecology, seed research, population genetics, taxonomy, translocations.


References

Abarenkov K, Henrik Nilsson R, Larsson K-H, Alexander IJ, Eberhardt U, Erland S, Høiland K, Kjøller R, Larsson E, Pennanen T, Sen R, Taylor AFS, Tedersoo L, Ursing BM, Vrålstad T, Liimatainen K, Peintner U, Kõljalg U (2010) The UNITE database for molecular identification of fungi – recent updates and future perspectives. New Phytologist 186, 281–285.
The UNITE database for molecular identification of fungi – recent updates and future perspectives.Crossref | GoogleScholarGoogle Scholar |

Abdelfattah A, Tack AJM, Lobato C, Wassermann B, Berg G (2023) From seed to seed: the role of microbial inheritance in the assembly of the plant microbiome. Trends in Microbiology 31, 346–355.
From seed to seed: the role of microbial inheritance in the assembly of the plant microbiome.Crossref | GoogleScholarGoogle Scholar |

Aftab M, Freeman A, Bretag T (2008) Seed health testing in pulse crops. Department of Environment and Primary Industries, Melbourne, Victoria. Available at https://apo.org.au/node/56574 [Verified 19 April 2023]

Agarwal VK, Sinclair JB (1996) ‘Principles of seed pathology.’ 2nd edn. (CRC Press/Lewis Publishers: Florida, USA)

Ahrens CW, James EA, Miller AD, Scott F, Aitken NC, Jones AW, Lu-Irving P, Borevitz JO, Cantrill DJ, Rymer PD (2020) Spatial, climate and ploidy factors drive genomic diversity and resilience in the widespread grass Themeda triandra. Molecular Ecology 29, 3872–3888.
Spatial, climate and ploidy factors drive genomic diversity and resilience in the widespread grass Themeda triandra.Crossref | GoogleScholarGoogle Scholar |

Arditti J, Ghani AKA (2000) Tansley Review No. 110. Numerical and physical properties of orchid seeds and their biological implications. New Phytologist 145, 367–421.
Tansley Review No. 110. Numerical and physical properties of orchid seeds and their biological implications.Crossref | GoogleScholarGoogle Scholar |

Australian Government (2023) Species profile and threats database, EPBC Act List of threatened flora. Available at http://www.environment.gov.au/cgi-bin/sprat/public/publicthreatenedlist.pl?wanted=flora [Verified 2 May 2023]

Balouchi H, Baladi S, Moradi A, Dehnavi MM (2017) The influence of temperature and moisture content on seed longevity of two genotypes of Linum usitatissimum. Seed Science and Technology 45, 130–138.
The influence of temperature and moisture content on seed longevity of two genotypes of Linum usitatissimum.Crossref | GoogleScholarGoogle Scholar |

Barrett SCH (2015) Influences of clonality on plant sexual reproduction. Proceedings of the National Academy of Sciences 112, 8859–8866.
Influences of clonality on plant sexual reproduction.Crossref | GoogleScholarGoogle Scholar |

Bennington CC, McGraw JB (1995) Phenotypic selection in an artificial population of Impatiens pallida: the importance of the invisible fraction. Evolution 49, 317–324.
Phenotypic selection in an artificial population of Impatiens pallida: the importance of the invisible fraction.Crossref | GoogleScholarGoogle Scholar |

Bentham G (1834) ‘Labiatarum genera et species.’ (James Moyes: London, UK)

Bentham G (1870) ‘Flora Australiensis: a description of the plants of the Australian Territory. Vol. 5.’ (L. Reeve and Co.: London, UK)

Bragg JG, Cuneo P, Sherieff A, Rossetto M (2020) Optimizing the genetic composition of a translocation population: Incorporating constraints and conflicting objectives. Molecular Ecology Resources 20, 54–65.
Optimizing the genetic composition of a translocation population: Incorporating constraints and conflicting objectives.Crossref | GoogleScholarGoogle Scholar |

Bragg JG, Yap J-YS, Wilson T, Lee E, Rossetto M (2021) Conserving the genetic diversity of condemned populations: optimizing collections and translocation. Evolutionary Applications 14, 1225–1238.
Conserving the genetic diversity of condemned populations: optimizing collections and translocation.Crossref | GoogleScholarGoogle Scholar |

Bragg JG, van der Merwe M, Yap J-YS, Borevitz J, Rossetto M (2022) Plant collections for conservation and restoration: can they be adapted and adaptable? Molecular Ecology Resources 22, 2171–2182.
Plant collections for conservation and restoration: can they be adapted and adaptable?Crossref | GoogleScholarGoogle Scholar |

Brodal G, Asdal Å (2021) Longevity of plant pathogens in dry agricultural seeds during 30 years of storage. Microorganisms 9, 2175
Longevity of plant pathogens in dry agricultural seeds during 30 years of storage.Crossref | GoogleScholarGoogle Scholar |

Brown AHD, Marshall DR (1995) A basic sampling strategy: theory and practice. In ‘Collecting plant genetic diversity: technical guidelines’. (Eds L Guarino, VR Rao, R Reid) pp. 75–91. (University Press: Cambridge, UK)

Bucharova A, Bossdorf O, Scheepens JF, Salguero-Gómez R (2023) Sustainable seed harvesting in wild plant populations. bioRxiv
Sustainable seed harvesting in wild plant populations.Crossref | GoogleScholarGoogle Scholar |

Byrne PF, Volk GM, Gardner C, Gore MA, Simon PW, Smith S (2018) Sustaining the future of plant breeding: the critical role of the USDA-ARS national plant germplasm system. Crop Science 58, 451–468.
Sustaining the future of plant breeding: the critical role of the USDA-ARS national plant germplasm system.Crossref | GoogleScholarGoogle Scholar |

Center for Plant Conservation (2019) CPC best plant conservation practices to support species survival in the wild. Center for Plant Conservation, Escondido, California, USA.

Chandel A, Mann R, Kaur J, Tannenbaum I, Norton S, Edwards J, Spangenberg G, Sawbridge T (2022) Australian native Glycine clandestina seed microbiota hosts a more diverse bacterial community than the domesticated soybean Glycine max. Environmental Microbiome 17, 56
Australian native Glycine clandestina seed microbiota hosts a more diverse bacterial community than the domesticated soybean Glycine max.Crossref | GoogleScholarGoogle Scholar |

Chapman T, Miles S, Trivedi C (2019) Capturing, protecting and restoring plant diversity in the UK: RBG Kew and the Millennium Seed Bank. Plant Diversity 41, 124–131.
Capturing, protecting and restoring plant diversity in the UK: RBG Kew and the Millennium Seed Bank.Crossref | GoogleScholarGoogle Scholar |

Conn BJ (1999) Teucrium. In ‘Flora of Victoria, Vol. 4’. (Eds NG Walsh, TJ Entwisle) pp. 456–459. (Inkata Press: Melbourne, Vic.)

Cooper M, Powell O, Voss-Fels KP, Messina CD, Gho C, Podlich DW, Technow F, Chapman SC, Beveridge CA, Ortiz-Barrientos D, Hammer GL (2021) Modelling selection response in plant-breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions. In silico Plants 3, diaa016
Modelling selection response in plant-breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions.Crossref | GoogleScholarGoogle Scholar |

Crawford AD, Monks L, Shade A, Wood JA, Errington G, Stevens A, Norton SL, Coates D (2021) Chapter 15: Maintenance, utilization and information storage. In ‘Plant germplasm conservation in Australia: strategies and guidelines for developing, managing and utilising ex situ collections’. 3rd edn. (Eds AJ Martyn Yenson, CA Offord, PF Meagher, T Auld, D Bush, DJ Coates, LE Commander, LK Guja, SL Norton, RO Makinson, R Stanley, N Walsh, D Wrigley, L Broadhurst) pp. 449–476. (Australian Network for Plant Conservation: Canberra, ACT)

Donohue K (2009) Completing the cycle: maternal effects as the missing link in plant life histories. Philosophical Transactions of the Royal Society B: Biological Sciences 364, 1059–1074.
Completing the cycle: maternal effects as the missing link in plant life histories.Crossref | GoogleScholarGoogle Scholar |

Eichler H (1965) ‘Supplement to J.M. Black’s Flora of South Australia.’ 2nd edn. (Govt. Printer: Adelaide, SA)

Ellis RH, Hong TD, Roberts EH (1985) ‘Handbook of seed technology for genebanks, vol. I. Principles and methodology.’ (International Board for Plant Genetic Resources: Rome, Italy)

Elmer WH (2001) Seeds as vehicles for pathogen importation. Biological Invasions 3, 263–271.
Seeds as vehicles for pathogen importation.Crossref | GoogleScholarGoogle Scholar |

Engels J, Engelmann F (1998) Introductory statement. Seed Science Research 8, 1–2.

Everingham SE, Offord CA, Sabot MEB, Moles AT (2021) Time-traveling seeds reveal that plant regeneration and growth traits are responding to climate change. Ecology 102, e03272
Time-traveling seeds reveal that plant regeneration and growth traits are responding to climate change.Crossref | GoogleScholarGoogle Scholar |

Falloon RE (1976) Curvularia trifolii as a high-temperature turfgrass pathogen. New Zealand Journal of Agricultural Research 19, 243–248.
Curvularia trifolii as a high-temperature turfgrass pathogen.Crossref | GoogleScholarGoogle Scholar |

Feigs JT, Holzhauer SIJ, Huang S, Brunet J, Diekmann M, Hedwall P-O, Kramp K, Naaf T (2022) Pollinator movement activity influences genetic diversity and differentiation of spatially isolated populations of clonal forest herbs. Frontiers in Ecology and Evolution 10, 908258
Pollinator movement activity influences genetic diversity and differentiation of spatially isolated populations of clonal forest herbs.Crossref | GoogleScholarGoogle Scholar |

Fensham RJ, Radford-Smith J (2021) Unprecedented extinction of tree species by fungal disease. Biological Conservation 261, 109276
Unprecedented extinction of tree species by fungal disease.Crossref | GoogleScholarGoogle Scholar |

Field DL, Ayre DJ, Whelan RJ, Young AG (2008) Relative frequency of sympatric species influences rates of interspecific hybridization, seed production and seedling performance in the uncommon Eucalyptus aggregata. Journal of Ecology 96, 1198–1210.
Relative frequency of sympatric species influences rates of interspecific hybridization, seed production and seedling performance in the uncommon Eucalyptus aggregata.Crossref | GoogleScholarGoogle Scholar |

Fort T, Pauvert C, Zanne AE, Ovaskainen O, Caignard T, Barret M, Compant S, Hampe A, Delzon S, Vacher C (2021) Maternal effects shape the seed mycobiome in Quercus petraea. New Phytologist 230, 1594–1608.
Maternal effects shape the seed mycobiome in Quercus petraea.Crossref | GoogleScholarGoogle Scholar |

Gebeyaw M (2020) Review on: impact of seed-borne pathogens on seed quality. American Journal of Plant Biology 5, 77–81.
Review on: impact of seed-borne pathogens on seed quality.Crossref | GoogleScholarGoogle Scholar |

Godfray HCJ (2002) Challenges for taxonomy. Nature 417, 17–19.
Challenges for taxonomy.Crossref | GoogleScholarGoogle Scholar |

Godfree RC, Marshall DJ, Young AG, Miller CH, Mathews S (2017) Empirical evidence of fixed and homeostatic patterns of polyploid advantage in a keystone grass exposed to drought and heat stress. Royal Society Open Science 4, 170934
Empirical evidence of fixed and homeostatic patterns of polyploid advantage in a keystone grass exposed to drought and heat stress.Crossref | GoogleScholarGoogle Scholar |

Goodwillie C, Kalisz S, Eckert CG (2005) The evolutionary enigma of mixed mating systems in plants: occurrence, theoretical explanations, and empirical evidence. Annual Review of Ecology, Evolution, and Systematics 36, 47–79.
The evolutionary enigma of mixed mating systems in plants: occurrence, theoretical explanations, and empirical evidence.Crossref | GoogleScholarGoogle Scholar |

Grafen A (1988) On the uses of data on lifetime reproductive success. In ‘Reproductive success’. (Ed. TH Clutton-Brock) pp. 454–471. (University of Chicago Press: Chicago, IL, USA)

Griffith MP, Calonje M, Meerow AW, Tut F, Kramer AT, Hird A, Magellan TM, Husby CE (2015) Can a botanic garden cycad collection capture the genetic diversity in a wild population? International Journal of Plant Sciences 176, 1–10.
Can a botanic garden cycad collection capture the genetic diversity in a wild population?Crossref | GoogleScholarGoogle Scholar |

Guerrant EO, Havens K, Vitt P (2014) Sampling for effective ex situ plant conservation. International Journal of Plant Sciences 175, 11–20.
Sampling for effective ex situ plant conservation.Crossref | GoogleScholarGoogle Scholar |

Hao L, Xu W, Qi G, Xin T, Xu Z, Lei H, Song J (2022) GAGE is a method for identification of plant species based on whole genome analysis and genome editing. Communications Biology 5, 947
GAGE is a method for identification of plant species based on whole genome analysis and genome editing.Crossref | GoogleScholarGoogle Scholar |

Harley RM, Atkins S, Budantsev A, Cantino PD, Conn B, Grayer RJ, Harley MM, De Kok R, Krestovskaja T, Morales A, Paton AJ, Ryding O, Upson T (2004) Labiatae. In ‘Flowering Plants - Dicotyledons’. The families and genera of vascular plants. Vol. 7. (Ed. JW Kadereit) pp. 167–275. (Springer: Berlin) https://doi.org/10.1007/978-3-642-18617-2_11

Hayman DL (1960) The distribution and cytology of the chromosome races of Themeda australis in southern Australia. Australian Journal of Botany 8, 58–68.
The distribution and cytology of the chromosome races of Themeda australis in southern Australia.Crossref | GoogleScholarGoogle Scholar |

Hegde SG, Nason JD, Clegg JM, Ellstrand NC (2006) The evolution of California’s wild radish has resulted in the extinction of its progenitors. Evolution 60, 1187–1197.

Hirashiki C, Kareiva P, Marvier M (2021) Concern over hybridization risks should not preclude conservation interventions. Conservation Science and Practice 3, e424
Concern over hybridization risks should not preclude conservation interventions.Crossref | GoogleScholarGoogle Scholar |

Hoban S (2019) New guidance for ex situ gene conservation: sampling realistic population systems and accounting for collection attrition. Biological Conservation 235, 199–208.
New guidance for ex situ gene conservation: sampling realistic population systems and accounting for collection attrition.Crossref | GoogleScholarGoogle Scholar |

Hoffmann AA, Sgrò CM (2011) Climate change and evolutionary adaptation. Nature 470, 479–485.
Climate change and evolutionary adaptation.Crossref | GoogleScholarGoogle Scholar |

Hogbin T (2022) Restore and Renew – making genomic and climatic information freely available to restoration practitioners. Available at https://recer.org.au/2022/11/restore_and_renew_restoration_genomics/ [Accessed 2 May 2023]

Hu J, Li J, Liang F, Liu L, Si S (2010) Genetic relationship of a cucumber germplasm collection revealed by newly developed EST-SSR markers. Journal of Genetics 89, e28–e32.

Huson DH (1998) SplitsTree: analyzing and visualizing evolutionary data. Bioinformatics 14, 68–73.
SplitsTree: analyzing and visualizing evolutionary data.Crossref | GoogleScholarGoogle Scholar |

Huson DH, Bryant D (2006) Application of phylogenetic networks in evolutionary studies. Molecular Biology and Evolution 23, 254–267.
Application of phylogenetic networks in evolutionary studies.Crossref | GoogleScholarGoogle Scholar |

Huson DH, Kloepper T, Bryant D (2008) SplitsTree 4.0-Computation of phylogenetic trees and networks. Bioinformatics 14, 68–73.

Jackson WD, Wiltshire RJE (2001) Historical taxonomy and a resolution of the Stylidium graminifolium complex (Stylidiaceae) in Tasmania. Australian Systematic Botany 14, 937–969.
Historical taxonomy and a resolution of the Stylidium graminifolium complex (Stylidiaceae) in Tasmania.Crossref | GoogleScholarGoogle Scholar |

Jeanes JA (2013) An overview of the Thelymitra nuda (Orchidaceae) complex in Australia including the description of six new species. Muelleria: An Australian Journal of Botany 31, 3–30.
An overview of the Thelymitra nuda (Orchidaceae) complex in Australia including the description of six new species.Crossref | GoogleScholarGoogle Scholar |

Jia J, Li H, Zhang X, Li Z, Qiu L (2017) Genomics-based plant germplasm research (GPGR). The Crop Journal 5, 166–174.
Genomics-based plant germplasm research (GPGR).Crossref | GoogleScholarGoogle Scholar |

Kameswara Rao N, Jackson MT (1997) Variation in seed longevity of rice cultivars belonging to different isozyme groups. Genetic Resources and Crop Evolution 44, 159–164.
Variation in seed longevity of rice cultivars belonging to different isozyme groups.Crossref | GoogleScholarGoogle Scholar |

Klimes L, Klimesov J, Hendriks R, van Groenendael JM, de Kroon H (1997) Clonal plant architecture: a comparative analysis of form and function. In ‘The ecology and evolution of clonal plants’. (Eds H de Kroon, JM van Groenendael) pp. 1–29. (Backhuys: Leiden, The Netherlands)

Labroo MR, Studer AJ, Rutkoski JE (2021) Heterosis and hybrid crop breeding: a multidisciplinary review. Frontiers in Genetics 12, 643761
Heterosis and hybrid crop breeding: a multidisciplinary review.Crossref | GoogleScholarGoogle Scholar |

Lee J-S, Velasco-Punzalan M, Pacleb M, Valdez R, Kretzschmar T, McNally KL, Ismail AM, Cruz PCS, Sackville Hamilton NR, Hay FR (2019) Variation in seed longevity among diverse Indica rice varieties. Annals of Botany 124, 447–460.
Variation in seed longevity among diverse Indica rice varieties.Crossref | GoogleScholarGoogle Scholar |

Leonhardt KW, Criley RA (1999) Proteaceae floral crops: cultivar development and underexploited uses. In ‘Perspectives on new crops and new uses’. (Ed. J Janick) pp. 410–430. (ASHS Press: Alexandria, VA, USA)

León-Lobos P, Way M, Aranda PD, Lima-Junior M (2012) The role of ex situ seed banks in the conservation of plant diversity and in ecological restoration in Latin America. Plant Ecology & Diversity 5, 245–258.
The role of ex situ seed banks in the conservation of plant diversity and in ecological restoration in Latin America.Crossref | GoogleScholarGoogle Scholar |

Li D-Z, Pritchard HW (2009) The science and economics of ex situ plant conservation. Trends in Plant Science 14, 614–621.
The science and economics of ex situ plant conservation.Crossref | GoogleScholarGoogle Scholar |

Li XX, Sun RF, Fang ZY, Liu TJ, Wang JL, Shen D, Wang HP, Song JP, Sun YY, Wang LR, Jiang SL (2016) Germplasm resources of horticultural crops and sustainable development of horticultural industry in China. Acta Horticulturae 1129, 1–8.
Germplasm resources of horticultural crops and sustainable development of horticultural industry in China.Crossref | GoogleScholarGoogle Scholar |

Lu-Irving P, Bragg JG, Rossetto M, King K, O’Brien M, van der Merwe MM (2023) Capturing genetic diversity in seed collections: an empirical study of two congeners with contrasting mating systems. Plants 12, 522
Capturing genetic diversity in seed collections: an empirical study of two congeners with contrasting mating systems.Crossref | GoogleScholarGoogle Scholar |

Martyn Yenson AJ, Offord CA, Meagher PF, Auld T, Bush D, Coates DJ, Commander LE, Guja LK, Norton SL, Makinson RO, Stanley R, Walsh N, Wrigley D, Broadhurst L (2021) ‘Plant germplasm conservation in Australia: strategies and guidelines for developing, managing and utilising ex situ collections.’ 3rd edn. (Australian Network for Plant Conservation: Canberra, ACT)

Mayr E, Bock WJ (2002) Classifications and other ordering systems. Journal of Zoological Systematics and Evolutionary Research 40, 169–194.
Classifications and other ordering systems.Crossref | GoogleScholarGoogle Scholar |

Mertin AA, Laurence MH, van der Merwe M, French K, Liew ECY (2022) The culturable seed mycobiome of two Banksia species is dominated by latent saprotrophic and multi-trophic fungi. Fungal Biology 126, 738–745.
The culturable seed mycobiome of two Banksia species is dominated by latent saprotrophic and multi-trophic fungi.Crossref | GoogleScholarGoogle Scholar |

Moreira RR, Caus G, Gomes Figueiredo JA, May De Mio LL (2020) Phomopsis rot caused by Diaporthe infecunda on fruit and flowers of Passiflora edulis in Brazil. Australasian Plant Pathology 49, 141–145.
Phomopsis rot caused by Diaporthe infecunda on fruit and flowers of Passiflora edulis in Brazil.Crossref | GoogleScholarGoogle Scholar |

Muhlfeld CC, Kovach RP, Jones LA, Al-Chokhachy R, Boyer MC, Leary RF, Lowe WH, Luikart G, Allendorf FW (2014) Invasive hybridization in a threatened species is accelerated by climate change. Nature Climate Change 4, 620–624.
Invasive hybridization in a threatened species is accelerated by climate change.Crossref | GoogleScholarGoogle Scholar |

Nagel M, Kranner I, Neumann K, Rolletschek H, Seal CE, Colville L, Fernández-Marín BE, Börner A (2015) Genome-wide association mapping and biochemical markers reveal that seed ageing and longevity are intricately affected by genetic background and developmental and environmental conditions in barley. Plant, Cell & Environment 38, 1011–1022.
Genome-wide association mapping and biochemical markers reveal that seed ageing and longevity are intricately affected by genetic background and developmental and environmental conditions in barley.Crossref | GoogleScholarGoogle Scholar |

Nallathambi P, Umamaheswari C, Lal SK, Manjunatha C, Berliner J (2020) Mechanism of seed transmission and seed infection in major agricultural crops in India. In ‘Seed-borne diseases of agricultural crops: detection, diagnosis & management’. (Eds R Kumar, A Gupta) pp. 749–791. (Springer: Singapore)

Nelson GJ (1971) “Cladism” as a philosophy of classification. Systematic Zoology 20, 373–376.
“Cladism” as a philosophy of classification.Crossref | GoogleScholarGoogle Scholar |

O’Donnell K, Sharrock S (2017) The contribution of botanic gardens to ex situ conservation through seed banking. Plant Diversity 39, 373–378.
The contribution of botanic gardens to ex situ conservation through seed banking.Crossref | GoogleScholarGoogle Scholar |

Parmesan C, Singer MC, Wee B, Mikheyev S (2023) The case for prioritizing ecology/behavior and hybridization over genomics/taxonomy and species’ integrity in conservation under climate change. Biological Conservation 281, 109967
The case for prioritizing ecology/behavior and hybridization over genomics/taxonomy and species’ integrity in conservation under climate change.Crossref | GoogleScholarGoogle Scholar |

Pegg GS, Lee DJ, Carnegie AJ (2018) Predicting impact of Austropuccinia psidii on populations of broad leaved Melaleuca species in Australia. Australasian Plant Pathology 47, 421–430.
Predicting impact of Austropuccinia psidii on populations of broad leaved Melaleuca species in Australia.Crossref | GoogleScholarGoogle Scholar |

Pellicer J, Leitch IJ (2020) The Plant DNA C-values database (release 7.1): an updated online repository of plant genome size data for comparative studies. New Phytologist 226, 301–305.
The Plant DNA C-values database (release 7.1): an updated online repository of plant genome size data for comparative studies.Crossref | GoogleScholarGoogle Scholar |

Prentis PJ, White EM, Radford IJ, Lowe AJ, Clarke AR (2007) Can hybridization cause local extinction: a case for demographic swamping of the Australian native Senecio pinnatifolius by the invasive Senecio madagascariensis? New Phytologist 176, 902–912.
Can hybridization cause local extinction: a case for demographic swamping of the Australian native Senecio pinnatifolius by the invasive Senecio madagascariensis?Crossref | GoogleScholarGoogle Scholar |

Prober SM, Doerr VAJ, Broadhurst LM, Williams KJ, Dickson F (2019) Shifting the conservation paradigm: a synthesis of options for renovating nature under climate change. Ecological Monographs 89, e01333
Shifting the conservation paradigm: a synthesis of options for renovating nature under climate change.Crossref | GoogleScholarGoogle Scholar |

Rauschkolb R, Li Z, Godefroid S, Dixon L, Durka W, Májeková M, Bossdorf O, Ensslin A, Scheepens JF (2022) Evolution of plant drought strategies and herbivore tolerance after two decades of climate change. New Phytologist 235, 773–785.
Evolution of plant drought strategies and herbivore tolerance after two decades of climate change.Crossref | GoogleScholarGoogle Scholar |

Raven PH, Guerrant EO, Havens K, Maunder M (2013) ‘Ex situ plant conservation: supporting species survival in the wild’. (Island Press: Washington, DC, USA)

Reed DH, Frankham R (2003) Correlation between fitness and genetic diversity. Conservation Biology 17, 230–237.
Correlation between fitness and genetic diversity.Crossref | GoogleScholarGoogle Scholar |

Reiter N, Dimon R, Freestone M (2021) Case Study 11.5: Saving orchids from extinction: the RBGV orchid conservation program ex situ collection. In ‘Plant germplasm conservation in Australia: strategies and guidelines for developing, managing and utilising ex situ collections’. 3rd edn. (Eds AJ Martyn Yenson, CA Offord, PF Meagher, T Auld, D Bush, DJ Coates, LE Commander, LK Guja, SL Norton, RO Makinson, R Stanley, N Walsh, D Wrigley, L Broadhurst) pp. 355–357. (Australian Network for Plant Conservation: Canberra, ACT)

Roach DA, Wulff RD (1987) Maternal effects in plants. Annual Review of Ecology and Systematics 18, 209–235.
Maternal effects in plants.Crossref | GoogleScholarGoogle Scholar |

Rose PF, Wilson KL, Telford IRH, Lamont RW, Bruhl JJ (2015) Multiple lines of evidence clarify limits of Allocasuarina thalassoscopica, A. defungens and A. littoralis (Allocasuarina sect. Cylindropitys, Casuarinaceae. Australian Systematic Botany 27, 257–281.
Multiple lines of evidence clarify limits of Allocasuarina thalassoscopica, A. defungens and A. littoralis (Allocasuarina sect. Cylindropitys, Casuarinaceae.Crossref | GoogleScholarGoogle Scholar |

Rossetto M, Bragg J, Kilian A, McPherson H, van der Merwe M, Wilson PD (2019) Restore and Renew: a genomics-era framework for species provenance delimitation. Restoration Ecology 27, 538–548.
Restore and Renew: a genomics-era framework for species provenance delimitation.Crossref | GoogleScholarGoogle Scholar |

Rossetto M, Yap J-YS, Lemmon J, Bain D, Bragg J, Hogbin P, Gallagher R, Rutherford S, Summerell B, Wilson TC (2021) A conservation genomics workflow to guide practical management actions. Global Ecology and Conservation 26, e01492
A conservation genomics workflow to guide practical management actions.Crossref | GoogleScholarGoogle Scholar |

Rutherford S, van der Merwe M, Wilson PG, Kooyman RM, Rossetto M (2019) Managing the risk of genetic swamping of a rare and restricted tree. Conservation Genetics 20, 1113–1131.
Managing the risk of genetic swamping of a rare and restricted tree.Crossref | GoogleScholarGoogle Scholar |

Rutherford S, Wilson TC, Yap J-YS, Lee E, Errington G, Rossetto M (2022) Evolutionary processes in an undescribed eucalypt: implications for the translocation of a critically endangered species. Annals of Botany 130, 491–508.
Evolutionary processes in an undescribed eucalypt: implications for the translocation of a critically endangered species.Crossref | GoogleScholarGoogle Scholar |

Solberg SØ, Yndgaard F, Andreasen C, Von Bothmer R, Loskutov IG, Asdal Å (2020) Long-term storage and longevity of orthodox seeds: a systematic review. Frontiers in Plant Science 11, 1007
Long-term storage and longevity of orthodox seeds: a systematic review.Crossref | GoogleScholarGoogle Scholar |

Sommerville KD, Martyn AJ, Offord CA (2013) Can seed characteristics or species distribution be used to predict the stratification requirements of herbs in the Australian Alps? Botanical Journal of the Linnean Society 172, 187–204.
Can seed characteristics or species distribution be used to predict the stratification requirements of herbs in the Australian Alps?Crossref | GoogleScholarGoogle Scholar |

Stapf O (1933) ‘Curtis’s Botanical Magazine. t.9320.’ (Bernard Quaritch Ltd: London, UK)

Taguiam JD, Evallo E, Balendres MA (2021) Epicoccum species: ubiquitous plant pathogens and effective biological control agents. European Journal of Plant Pathology 159, 713–725.
Epicoccum species: ubiquitous plant pathogens and effective biological control agents.Crossref | GoogleScholarGoogle Scholar |

Tarquinio F, Attlan O, Vanderklift MA, Berry O, Bissett A (2021) Distinct endophytic bacterial communities inhabiting seagrass seeds. Frontiers in Microbiology 12, 703014
Distinct endophytic bacterial communities inhabiting seagrass seeds.Crossref | GoogleScholarGoogle Scholar |

Todesco M, Pascual MA, Owens GL, Ostevik KL, Moyers BT, Hübner S, Heredia SM, Hahn MA, Caseys C, Bock DG, Rieseberg LH (2016) Hybridization and extinction. Evolutionary Applications 9, 892–908.
Hybridization and extinction.Crossref | GoogleScholarGoogle Scholar |

van der Merwe MM, Yap J-YS, Wilson PD, Murphy HT, Ford A (2021a) All populations matter: conservation genomics of Australia’s iconic purple wattle, Acacia purpureopetala. Diversity 13, 139
All populations matter: conservation genomics of Australia’s iconic purple wattle, Acacia purpureopetala.Crossref | GoogleScholarGoogle Scholar |

van der Merwe M, Broadhurst L, Coates D, Rossetto M (2021b) Chapter 3 Genetic guidelines for acquiring and maintaining collections for ex situ conservation. In ‘Plant germplasm conservation in Australia: strategies and guidelines for developing, managing and utilising ex situ collections’. 3rd edn. (Eds AJ Martyn Yenson, CA Offord, PF Meagher, T Auld, D Bush, DJ Coates, LE Commander, LK Guja, SL Norton, RO Makinson, R Stanley, N Walsh, D Wrigley, L Broadhurst) pp. 55–83. (Australian Network for Plant Conservation: Canberra, ACT)

Warman D (2018) Targeted searches and monitoring of Astrotricha crassifolia Blakely. (Araliaceae). Saving our Species. NSW Department of Planning, Industry and Environment.

Warschefsky E, Penmetsa RV, Cook DR, Von Wettberg EJB (2014) Back to the wilds: tapping evolutionary adaptations for resilient crops through systematic hybridization with crop wild relatives. American Journal of Botany 101, 1791–1800.
Back to the wilds: tapping evolutionary adaptations for resilient crops through systematic hybridization with crop wild relatives.Crossref | GoogleScholarGoogle Scholar |

Weis AE (2018) Detecting the “invisible fraction” bias in resurrection experiments. Evolutionary Applications 11, 88–95.
Detecting the “invisible fraction” bias in resurrection experiments.Crossref | GoogleScholarGoogle Scholar |

White FJ, Ensslin A, Godefroid S, Faruk A, Abeli T, Rossi G, Mondoni A (2023) Using stored seeds for plant translocation: the seed bank perspective. Biological Conservation 281, 109991
Using stored seeds for plant translocation: the seed bank perspective.Crossref | GoogleScholarGoogle Scholar |

Whitehead MR, Lanfear R, Mitchell RJ, Karron JD (2018) Plant mating systems often vary widely among populations. Frontiers in Ecology and Evolution 6, 38
Plant mating systems often vary widely among populations.Crossref | GoogleScholarGoogle Scholar |

Wilson T (2022) Progress report on the systematics of Australian Ajugoideae. Australasian Systematic Botany Society Newsletter 191, 14–18.

Yap J-YS, Rossetto M (2020) Conservation genomics of Astrotricha crassifolia in support of management and translocation activities. Research Centre for Ecosystem Resilience, Royal Botanic Garden Sydney, NSW.

Yap J-YS, Wilson TC, Rutherford S, Rossetto M (2019) Conservation genomics of Eucalyptus sp. Cattai in support of species status, management and translocation advice. Research Centre for Ecosystem Resilience, Royal Botanic Garden Sydney, NSW.

Zheng X, Levine D, Shen J, Gogarten SM, Laurie C, Weir BS (2012) A high-performance computing toolset for relatedness and principal component analysis of SNP data. Bioinformatics 28, 3326–3328.
A high-performance computing toolset for relatedness and principal component analysis of SNP data.Crossref | GoogleScholarGoogle Scholar |