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Soil Research

Soil Research

Soil Research is an international journal for publishing research about fundamental and applied aspects of soil science. Read more about the journalMore

Editors-in-Chief: Balwant Singh and Mark Tibbett

Current Issue

Soil Research

Volume 54 Number 8 2016


Soil composition, heterogeneity and carbonate content can affect the prediction accuracy of particle size distribution (PSD) using mid-infrared diffuse reflectance and partial least-squares regression (PLSR). Single large global calibrations could be used for PSD predictions of specific soil sets and showed improvement by fine grinding. The PLSR loading weights, associated with grinding, were linked to a reduction of inter- and intra-particulate heterogeneity and access of the infrared into the soil matrix by removal or dilution of surface coatings.

SR15291Spatial and temporal variations of soil function in a Mediterranean serpentine ecosystem

Nikolaos Monokrousos, George Charalampidis, Pantelitsa Kapagianni, Maria D. Argyropoulou and Efimia M. Papatheodorou
pp. 905-913

Serpentine soils are naturally metalliferous and hostile to most plants and animals. Exploring soil variables under evergreen-sclerophyllous and phryganic shrubs of a serpentine Mediterranean ecosystem revealed that heavy metals did not inhibit soil enzymes that reflect microbial activity, while potassium availability was crucial for the establishment of vegetation. The climate imposed strong temporal variations on the soil environment. The availability of nutrients and heavy metals in soils under the different plant species was not reflected in their foliar concentrations.

SR15284Multifractal analysis of soil hydraulic properties in arid areas

N. Pahlevan, M. R. Yazdani, A. A. Zolfaghari and M. Ghodrati
pp. 914-925

Multifractal analysis was used to determine the spatial variability of soil properties in arid land areas of Iran. The scaling patterns and structural heterogeneity of general and hydraulic soil properties measured across a transect were quantified. Additionally, the distribution of soil hydraulic properties was investigated.

SR15252Mineralogy of volcanically derived alluvial soils at Moshi, Tanzania

T. S. Taylor, J. C. Hughes and L. W. Titshall
pp. 926-936

Irrigation of crops on volcanic soils in Tanzania is common, but knowledge of their mineralogy and its effect on soil properties is scarce. This study investigated the mineralogy of such soils on a sugar estate and found that the main clay minerals were halloysite, high-defect kaolinite and allophane. This suite of minerals has a major effect on the reactive surface area and is likely to affect the physical properties of these soils, such as water retention and transmission properties.


Sediments were collected from burned and unburned plots with different vegetation cover conditions after each rainfall event. The main aim of the study was to examine the effects of post-fire vegetation cover, bare soil disaggregation, slope and rainfall intensity on eroded sediment size distribution. Finer soil particles were transported more from burned than unburned plots because of significant differences in vegetation cover.


There are differential dispersive/flocculative effects of K and Mg to Na and Ca, respectively. Hence, there is a requirement to replace the exchangeable sodium percentage (ESP). Exchangeable dispersive percentage (EDP) is derived to replace ESP. The EDP is validated against two datasets, and further mathematical investigation of the contribution of Mg to dispersion is undertaken. Mineralogy affects turbidity results at a given dispersive index, and an improved criterion for assessment of Mg effect on dispersivity is presented.


Soil microbial carbon was significantly higher with MSWC+50% recommended dose of fertilisers (RDF) than control. Soil salinity significantly decreased using 37% with MSWC + 50% RDF relative to the control at 150 days of mustard growth during 2013–14. The maximum concentration of soil organic carbon (SOC) was observed with MSWC+50% RDF. The grain yield increased by 10% and 28% for mustard and pearl millet, respectively, with RSC + 50% RDF relative to 100% RDF during the first year of cropping cycle.


The transport parameters of heavy metal/metalloid compounds and pesticides in soils as well as their relationships with soil physicochemical properties are needed for assessment of pollutant mobility in the soils. Time-domain reflectometry-measured bulk soil electrical conductivity can be used as the basic data for the transport parameters and relationships. The clay content and, in some cases, median grain diameter of the soil controls the relationships between the transport parameters and soils.


Sustainable management practices have been widely adopted in the oil palm sector, especially in the recycling of oil palm solid waste. The decomposition of oil palm empty fruit bunch (EFB) enables recycling of nutrients that are released into the soil when EFB is applied as a mulch for newly transplanted oil palms. Ninety days after application of EFB mulch, the dry weight decreased to half of the original weight, and soil properties significantly improved when compared with the properties of soil that was not conditioned with EFB mulch.

SR15346Effect of different rice establishment methods on soil physical properties in drought-prone, rainfed lowlands of Bihar, India

Surajit Mondal, Santosh Kumar, A. Abdul Haris, S. K. Dwivedi, B. P. Bhatt and J. S. Mishra
pp. 997-1006

Puddling that deteriorates soil health is a time consuming and labour intensive process. The aims of the study was to evaluate the effect of alternative rice establishment methods on soil physical properties and productivity of the rice-wheat cropping system. Unpuddling can create a more favorable conditions for soil health by improving bulk density, aggregation stability, pore size distribution, penetration resistance which in the longer term can improve crop growth.

Online Early

The peer-reviewed and edited version of record published online before inclusion in an issue

Published online 05 December 2016

SR16106Characterisation of soil organic matter in a semi-arid fluvic Entisol fertilised with cattle manure and/or gliricidia by spectroscopic methods

Dário C. Primo, Rômulo S. C. Menezes, Wilson T. L. Silva, Fabio F. Oliveira, José C. B. D. Júnior and Everardo V. S. B. Sampaio
 

The effects of manure and/or gliricidia on soil organic matter were examined. High-quality, N-rich organic fertilizers reduced the more labile matter organic of soil. The techniques tested were good indicators of soil organic matter quality in our site.

Published online 30 November 2016

SR15297Quantification of deep soil carbon by a wet digestion technique

Podjanee Sangmanee, Bernard Dell, Richard J. Harper and David J. Henry
 

Carbon occurs in small concentrations to very great depths in many soils. However, its distribution is poorly understood. This study examined two readily available techniques for measuring soil carbon content. An equation was developed that allows prediction of total carbon in deep regolithic soils.

Published online 30 November 2016

SR16127Impacts of different mulching patterns in rainfall-harvesting planting on soil water and spring corn growth development in semihumid regions of China

Xiaolong Ren, Peng Zhang, Xiaoli Liu, Shahzad Ali, Xiaoli Chen and Zhikuan Jia
 

In semihumid dryland farming areas of China, crop production is commonly affected by seasonal water deficit and has become a widespread issue. A four-year field trial was conducted to determine the impacts of different mulching patterns on rainfall-harvesting planting on spring corn. The results showed that rain-harvesting planting can improve soil moisture storage and availability in the furrow and increase corn yield. Thus, this method can be applied as an efficient cultivation pattern in the present as well as other similar areas.

Published online 24 November 2016

SR16218Suboptimal fertilisation compromises soil physical properties of a hard-setting sandy loam

Johannes Lund Jensen, Per Schjønning, Bent T. Christensen and Lars Juhl Munkholm
 

Fertilisation affects key soil physical properties related to soil tilth. We studied several soil physical properties after 120 years of contrasting fertiliser rate and type and found that crop-yield-optimised rates of mineral fertiliser appear to sustain soil physical properties almost as well as manure, whereas long-term suboptimal fertilisation compromises soil physical properties. Thus, the results illustrate the importance of ensuring an optimal crop growth to sustain soil physical properties.

Published online 10 November 2016

SR16097Long-term effects of fertilisers and organic sources on soil organic carbon fractions under a rice–wheat system in the Indo-Gangetic Plains of north-west India

D. Das, B. S. Dwivedi, V. K. Singh, S. P. Datta, M. C. Meena, D. Chakraborty, K. K. Bandyopadhyay, R. Kumar and R. P. Mishra
 

Long-term effects of different nutrient supply options on soil organic C (SOC) fractions and crop yields under a rice–wheat system were investigated. Conjoint use of organic manure and green gram residue with fertilisers enhanced the lability of SOC, whereas incorporation of cereal crop residues increased passive pools of SOC. Very labile and labile pools of SOC were significantly correlated with crop yields.

Published online 09 November 2016

SR16006Potential effect of melanised endophytic fungi on levels of organic carbon within an Alfisol

T. T. Mukasa Mugerwa and P. A. McGee
 

Food production in Australia is extremely dependent on healthy soils. Our current methods of intensive farming, however, often leave soils depleted, thereby hindering long-term crop growth. This study identified a group of beneficial fungi that could enhance soil health and provide us with a new and environmentally friendly method by which soil health, and therefore plant growth, could be improved.

Published online 08 November 2016

SR15305Effects of tillage on the soil water retention curve during a fallow period of a semiarid dryland

C. Peña-Sancho, M. V. López, R. Gracia and D. Moret-Fernández
 

The effect of tillage practices on θ(ψ) during a long fallow period was studied under three different tillage systems: conventional, reduced and no-tillage. Tillage practices had a significant effect on θ(ψ) and related parameters, whereas soil depth did not influence θ(ψ). The first effective rainfall events promoted recovery of the soil pre-tillage θ(ψ) shapes.

Published online 08 November 2016

SR16132Plant litter variability and soil N mobility

Hongtao Zhong, Carol Smith, Brett Robinson, Young-Nam Kim and Nicholas Dickinson
 

Native plants are being widely reintroduced into agricultural landscape matrices in lowland New Zealand, where they provide both perimeter buffer zones and pathways to environmental receptors. The cultural and ecological benefits of integrating natural ecosystems into farmland are well established, but little is known of their potential role in ameliorating significant environmental concerns. This study shows that litter incorporated into soil from native plants modifies soil characteristics and may help ameliorate concerns associated with nitrate leaching and greenhouse gases emissions.

Published online 08 November 2016

SR16167Tracking fertiliser and soil nitrogen in irrigated cotton: uptake, losses and the soil N stock

B. C. T. Macdonald, Y. F. Chang, A. Nadelko, S. Tuomi and M. Glover
 

What is the fate of fertiliser nitrogen in cotton crop production? What is the amount of nitrogen that the soil contributes to cotton crop production? These are fundamental questions for plant and soil management. The present findings indicate that the soil supplies significant amounts of nitrogen to the crop, and management of this nutrient pool is critical.

Published online 03 November 2016

SR16149Upper subsoil pore characteristics and functions as affected by field traffic and freeze–thaw and dry–wet treatments

Per Schjønning, Mathieu Lamandé, Valentin Crétin and Janne Aalborg Nielsen
 

Soil compaction by machinery in modern agriculture may affect important functions taking place in the upper part of the non-tilled subsoil. We studied the effects of realistic field traffic on soil pores at 0.3 m depth and found that wheel loads higher than approximately 3 Mg were critical to sustained soil functions. Freeze–thaw and dry–wet processes were only partly able to ameliorate the compaction damage, which calls for an increased focus on the threat of subsoil compaction.

Published online 31 October 2016

SR16111Pedogenic processes and soil–landform relationships for identification of yield-limiting soil properties

Duraisamy Vasu, Surendra Kumar Singh, Pramod Tiwary, Padikkal Chandran, Sanjay Kumar Ray and Veppangadu Perumal Duraisami
 

Plant yields are limited by unfavourable changes in inherent soil properties. Herein, the inherent soil properties were studied through soil–landform relationship in a part of semi-arid tropical (SAT) Deccan Plateau in India, and subsoil sodicity and poor saturated hydraulic conductivity were identified as major plant yield-limiting factors. There is scope for upscaling the results of the present study to similar SAT areas around the world.

Published online 17 October 2016

SR16136Effects of strategic tillage on short-term erosion, nutrient loss in runoff and greenhouse gas emissions

A. R. Melland, D. L. Antille and Y. P. Dang
 

In long-term no-tillage soils with controlled-traffic farming, occasional strategic tillage for weed control can have negative environmental effects. In a field study, greenhouse gas emissions and water, sediment and nutrient loss in runoff after heavy rainfall were measured as being similar or higher immediately after strategic tillage compared with no-tillage systems, particularly on a sodic soil. The trade-offs between weed control, erosion and greenhouse gas emissions should be considered as part of any tillage strategy.


Gravel mulch had a significant effect on water use by suppressing soil evaporation, which translated to improved water use efficiency for canola. Gravel mulching has a favourable effect on the soil water balance, reinforcing it as a viable management option for soil water conservation, especially in arid and semiarid lands where plant available water is a major limiting factor for crop growth.

Published online 10 October 2016

SR16058The composition of organic phosphorus in soils of the Snowy Mountains region of south-eastern Australia

Ashlea L. Doolette, Ronald J. Smernik and Timothy I. McLaren
 

Climate strongly influences the cycling of soil organic matter by controlling the release and accumulation of organic carbon and nitrogen. However, little is known about the effect of climate on the phosphorus component of soil organic matter (i.e. organic P). Here we examine the speciation of P in some Australian alpine and sub-alpine soils. We provide preliminary evidence that the organic P composition of these soils from wet, cool environments is markedly different to that typically observed from warm, dry environments in Australia.

Published online 10 October 2016

SR16116Nitrification potential in the rhizosphere of Australian native vegetation

Saikat Chowdhury, Ramya Thangarajan, Nanthi Bolan, Julianne O'Reilly-Wapstra, Anitha Kunhikrishnan and Ravi Naidu
 

Rhizosphere effect on nitrogen transformation in Australian native plants was investigated. Ammonium oxidizing bacteria and nitrification potential were lower in rhizosphere soils than that in non-rhizosphere soils. Some Australian native plants were found to inhibit nitrification in their rhizosphere.

Published online 03 October 2016

SR16057Minerals control phosphorus solubility in long-term-cultivated calcareous soils

Mohsen Jalali and Mahdi Jalali
 

Phosphorus (P) plays a vital role in plant production. However, excessive application of P as a fertilizer can lead to accumulation in the environment and pose potential threat. The present study examines the solubility of phosphorus in long-term cultivated calcareous soils. The findings indicate that P applied as a fertilizer can be immobilized via different ways. However, when the soil becomes saturated with P, any additional P dissolves and moves freely with water either directly to a stream or downward into the groundwater.

Published online 03 October 2016

SR16123Effects of crop rotation on properties of a Vietnam clay soil under rice-based cropping systems in small-scale farmers

Tran Ba Linh, Vo Thi Guong, Vo Thi Thu Tran, Le Van Khoa, Daniel Olk and Wim M. Cornelis
 

Rotations rice-upland crops and upland crop monocultures alleviated soil compaction. New cropping systems improved soil physical properties at plow pan and enhanced the degree of soil organic matter decomposition in paddy soil. Rice-upland crop systems can be solution to avoid further degradation of paddy soil. The present study contributes to current knowledge towards maintaining optimum soil quality and supporting sustainable rice production area in the Mekong Delta, Vietnam.

Published online 26 September 2016

SR15038Effects of land use and topography on spatial variety of soil organic carbon density in a hilly, subtropical catchment of China

Huanyao Liu, Jiaogen Zhou, Qingyu Feng, Yuyuan Li, Yong Li and Jinshui Wu
 

Soil organic carbon density (SOCD) had a moderate spatial dependence with a nugget-to-sill ratio of 60.72% and a range of 182 m in the Jinjing catchment of subtropical China. The spatial variation of SOCD was affected by land use types (woodlands, paddy fields and tea fields) and topography (elevation, slope, topographic wetness index). A geographically weighted regression model improved the accuracy in predicting SOCD than ordinary kriging, inverse distance weighted, multiple linear regression, and linear mixed-effects models.

Published online 26 September 2016

SR16010Available carbon and nitrate increase greenhouse gas emissions from soils affected by salinity

Duy Minh Dang, Ben Macdonald, Sören Warneke and Ian White
 

Sea-level rise and saline water intrusion have caused a shortage of fresh water and affected agricultural areas globally. The findings of an incubation experiment to examine the effects of salinity on soil carbon and nitrogen cycling indicate that salinity has altered carbon and nitrogen cycles in the acid sulfate soil. Future fertiliser and crop management will need to account for the changed nutrient cycling caused by saline water intrusion and climate change.


Field experiments were conducted for two consecutive seasons with four fertilisers namely inorganic fertiliser (NPK), starch-coated urea (SCU), neem-coated urea (NCU), and urea alone (UA) in a tropical wheat ecosystem. The SCU, NCU, and UA treatments decreased the total N2O emissions by 23%, 12%, and 4%, respectively, over the application of NPK. The application of SCU in wheat ecosystem is suitable as a means of reducing N2O emissions without affecting grain productivity.

Published online 26 September 2016

SR15347Leaf decomposition of cork oak under three different land uses within a montado of southern Portugal

Maria Luísa Arosa, Sofia R. Costa and Helena Freitas
 

Cork oak decomposition dynamics in montado were compared under three land uses (grassland, shrubland and woodland). According to land uses, the study highlighted important differences in cork oak leaf fall, litter quality and litter decomposition. The main results showed a faster nutrient cycling occurring in montados with a high tree density and a dense shrub layer, thus lower decomposition rates occurred in the more disturbed sites.

Published online 20 September 2016

SR15219Gypsum application increases the carbon stock in soil under sugar cane in the Cerrado region of Brazil

L. G. Araújo, C. C. Figueiredo and D. M. G. Sousa
 

The use of gypsum to amend tropical soils rich in toxic aluminium can effectively increase soil carbon stocks. Total carbon stock in the soil and its fractions were estimated after four growing seasons of sugar cane under gypsum application. Of the total increase in C stocks resulting from gypsum application, 80% occurred in the 40–100-cm layer.


Organic carbon (OC) concentration is often very low in sands. Clay addition to these soils can increase soil OC concentration through increased input of OC from increased plant biomass and increased stabilisation of OC by binding to clays. A soil-sampling methodology for organic carbon in clay-modified soil was developed, and clay modification was shown to increase OC concentrations and stocks compared with unmodified control soil.


To gain insight into the relative effects of two locust control insecticide applications, we monitored litter decomposition and microbial functional diversity responses to chemical and biopesticide treatment methods. Results suggested there is little evidence of an effect of our pesticide application methods on arid-zone litter decomposition or microbial functional diversity, thus supporting the status of the biocontrol agent (Metarhizium acridum) or ultra-low volume fipronil barrier treatments as low-hazard locust control applications in arid Australia.

Published online 12 September 2016

SR15322Soil organic and organomineral fractions as indicators of the effects of land management in conventional and organic sugar cane systems

Carolina B. Brandani, Thalita F. Abbruzzini, Richard T. Conant and Carlos Eduardo P. Cerri
 

We determined (1) the effects of different sugar cane management on the C and N content of soil organic matter (SOM) fractions; (2) the effects of crop management, soil texture, depth and different organic matter additions on changes in 13C/12C and 15N/14N isotope composition; and (3) the amount of SOC derived from different sources. Green cane combined with organic system is a strategy for long-term storage of total C and N in the SOM fraction associated with <53-µm organomineral and the light fraction.

Published online 12 September 2016

SR16047Dissolved organic nitrogen contributes significantly to leaching from furrow-irrigated cotton–wheat–maize rotations

B. C. T. Macdonald, A. J. Ringrose-Voase, A. J. Nadelko, M. Farrell, S. Tuomi and G. Nachimuthu
 

In the present study, over a 5-year period (2008–2013), 740 kg N ha–1 fertiliser was applied to an irrigated cotton–wheat–maize rotation on a cracking clay (grey Vertosol). The N in the drainage was composed of 12.8 kg NOx-N ha–1, 8.7 DON-N and 0.1 NH4+-N kg ha–1. This result shows that DON is an important component (40%) of the deep drainage N from irrigated Vertosol cotton production systems.


Very dry soil moisture conditions enhanced particulate phosphorus losses in surface runoff from an Organic soil and from a Brown soil under very wet conditions. A high hydraulic conductivity resulted in more P being lost in subsurface flow than surface runoff from the Organic soil, whereas surface runoff losses dominated the Brown soil. The quantity of P lost was inversely related to the anion storage capacity of the soil.

Published online 05 September 2016

SR15377Qualitative and quantitative response of soil organic carbon to 40 years of crop residue incorporation under contrasting nitrogen fertilisation regimes

Christopher Poeplau, Lisa Reiter, Antonio Berti and Thomas Kätterer
 

The long-term effect of crop residue incorporation on soil organic carbon stocks and fractions was investigated in a field experiment in Padua, Italy. After 40 years, only 4% (3.1 Mg ha–1) of the incorporated residue-carbon was retained in the soil with 93% of that carbon being stabilised in the silt and clay fraction. We concluded that aboveground crop residue incorporation was not a significant measure to increase soil carbon storage in the investigated experiment.

Published online 30 August 2016

SR16068Soil charcoal prediction using attenuated total reflectance mid-infrared spectroscopy

E. U. Hobley, A. J. L. E. Gay Brereton and B. Wilson
 

We quantified the charcoal content of artificial soil samples of defined quantities of rock, charcoal and litter, spanning a wide range of organic carbon contents (0.1–15%). Using attenuated total reflectance mid-infrared spectroscopy combined with randomForest modelling, we overcame traditional limitations (e.g. non-linearity) of infrared analysis and accurately quantified the charcoal content of the standards, enabling rapid, low-cost and efficient charcoal analysis in soil.

Published online 22 August 2016

SR15359The nitrification inhibitor 3,4,-dimethylpyrazole phosphate strongly inhibits nitrification in coarse-grained soils containing a low abundance of nitrifying microbiota

Elliott G. Duncan, Cathryn A. O'Sullivan, Anna K. Simonsen, Margaret M. Roper, Mark B. Peoples, Karen Treble and Kelley Whisson
 

The nitrification inhibitor 3,4,-dimethylpyrozole phosphate (DMPP) may be effective in minimising environmental degradation caused by NO3leaching from excessive N fertiliser use. DMPP has not been widely investigated on coarse-grained soils containing a low abundance of nitrifying microbes. In this study, using such soils, DMPP conserved NH4+ and inhibited nitrifying microbial populations for 100 days, which is longer than observed previously for heavier soil types. In addition, DMPP was more effective than another nitrification inhibitor (nitrapyrin) in inhibiting nitrification. These soils also contained low Cu, a cofactor in ammonia mono-oxygenase (AMO), which facilitates nitrification, suggesting an interaction between DMPP and Cu availability controlled this process. Thus, DMPP has the potential to be an important tool in minimising nitrification in areas where these soils are common (e.g. Western Australia’s agricultural zones).


Sustainable improvements in productivity and profitability of structurally weak or dispersive texture contrast soils have proved elusive. Blade loosening to a depth of approximately 300 mm with a machine that has little draft and near-zero soil disturbance increased crop production and maintained an unsaturated and stable root zone. The blade loosener could be mounted on seeders operating in a controlled traffic farming regimen, and thus provide a sustainable means of raising the productivity and profitability of farming structurally weak texture contrast soils.

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