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Pacific Conservation Biology Pacific Conservation Biology Society
A journal dedicated to conservation and wildlife management in the Pacific region.
RESEARCH ARTICLE (Open Access)

A comparison of abundance and distribution model outputs using camera traps and sign surveys for feral pigs

Derek R. Risch https://orcid.org/0000-0002-0394-0562 A E , Jeremy Ringma A B , Shaya Honarvar C D and Melissa R. Price https://orcid.org/0000-0003-1836-3769 A
+ Author Affiliations
- Author Affiliations

A University of Hawai‘i at Mānoa, 1910 East-west Road, Honolulu, HI 96822, USA.

B Present address: Royal Melbourne Institute of Technology University, GPO Box 2476V, Melbourne, Vic. 3001, Australia.

C Department of Land and Natural Resources, Division of Forestry and Wildlife, 1151 Punchbowl Street, Honolulu, HI 96822, USA.

D Present address: University of Hawai‘i at Mānoa, School of Life Sciences, 3190 Maile Way, Honolulu, HI 96822, USA.

E Corresponding author. Email: drisch@hawaii.edu

Pacific Conservation Biology 27(2) 186-194 https://doi.org/10.1071/PC20032
Submitted: 8 April 2020  Accepted: 20 September 2020   Published: 14 October 2020

Journal Compilation © CSIRO 2021 Open Access CC BY-NC

Abstract

Species distribution models play a central role in informing wildlife management. For models to be useful, they must be based on data that best represent the presence or abundance of the species. Data used as inputs in the development of these models can be obtained through numerous methods, each subject to different biases and limitations but, to date, few studies have examined whether these biases result in different predictive spatial models, potentially influencing conservation decisions. In this study, we compare distribution model predictions of feral pig (Sus scrofa) relative abundance using the two most common monitoring methods: detections from camera traps and visual surveys of pig sign. These data were collected during the same period using standardised methods at survey sites generated using a random stratified sampling design. We found that although site-level observed sign data were only loosely correlated with observed camera detections (R2 = 0.32–0.45), predicted sign and camera counts from zero-inflated models were well correlated (R2 = 0.78–0.88). In this study we show one example in which fitting two different forms of abundance data using environmental covariates explains most of the variance between datasets. We conclude that, as long as outputs are produced through appropriate modelling techniques, these two common methods of obtaining abundance data may be used interchangeably to produce comparable distribution maps for decision-making purposes. However, for monitoring purposes, sign and camera trap data may not be used interchangeably at the site level.

Keywords: abundance index, feral pig, invasive species, monitoring, Pacific region, species distribution, Sus scrofa, ungulates, wild pig, wildlife management.


References

Ballari, S. A., and Barrios‐García, M. N. (2014). A review of wild boar Sus scrofa diet and factors affecting food selection in native and introduced ranges. Mammal Review 44, 124–134.
A review of wild boar Sus scrofa diet and factors affecting food selection in native and introduced ranges.Crossref | GoogleScholarGoogle Scholar |

Barrios-Garcia, M. N., and Ballari, S. A. (2012). Impact of wild boar (Sus scrofa) in its introduced and native range: a review. Biological Invasions 14, 2283–2300.
Impact of wild boar (Sus scrofa) in its introduced and native range: a review.Crossref | GoogleScholarGoogle Scholar |

Bengsen, A. J., Leung, L. K.-P., Lapidge, S. J., and Gordon, I. J. (2011). Using a general index approach to analyze camera-trap abundance indices. The Journal of Wildlife Management 75, 1222–1227.
Using a general index approach to analyze camera-trap abundance indices.Crossref | GoogleScholarGoogle Scholar |

Bivand, R., Keitt, T., and Rowlingson, B. (2018). rgdal: bindings for the geospatial data abstraction library. R package version 1.4.3. Available at https://CRAN.R-project.org/package=rgdal

Bondi, N. D., White, J. G., Stevens, M., and Cooke, R. (2010). A comparison of the effectiveness of camera trapping and live trapping for sampling terrestrial small-mammal communities. Wildlife Research 37, 456–465.
A comparison of the effectiveness of camera trapping and live trapping for sampling terrestrial small-mammal communities.Crossref | GoogleScholarGoogle Scholar |

Chauvenet, A. L. M., Gill, R. M. A., Smith, G. C., Ward, A. I., and Massei, G. (2017). Quantifying the bias in density estimated from distance sampling and camera trapping of unmarked individuals. Ecological Modelling 350, 79–86.
Quantifying the bias in density estimated from distance sampling and camera trapping of unmarked individuals.Crossref | GoogleScholarGoogle Scholar |

Cole, R. J., and Litton, C. M. (2014). Vegetation response to removal of non-native feral pigs from Hawaiian tropical montane wet forest. Biological Invasions 16, 125–140.
Vegetation response to removal of non-native feral pigs from Hawaiian tropical montane wet forest.Crossref | GoogleScholarGoogle Scholar |

Desurmont, G. A., Donoghue, M. J., Clement, W. L., and Agrawal, A. A. (2011). Evolutionary history predicts plant defense against an invasive pest. Proceedings of National Academy of Science 108, 7070–7074.
Evolutionary history predicts plant defense against an invasive pest.Crossref | GoogleScholarGoogle Scholar |

Diong, C. H. (1982). Population biology and management of the feral pig (Sus scrofa L.) in Kipahulu Valley, Maui. Ph.D. Thesis, University of Hawaii.

Donlan, C. J., Campbell, K., Cabrera, W., Lavoie, C., Carrion, V., and Cruz, F. (2007). Recovery of the Galápagos rail (Laterallus spilonotus) following the removal of invasive mammals. Biological Conservation 138, 520–524.
Recovery of the Galápagos rail (Laterallus spilonotus) following the removal of invasive mammals.Crossref | GoogleScholarGoogle Scholar |

Dormann, C. F., Elith, J., Bacher, S., Buchmann, C., Carl, G., Carré, G., Marquéz, J. R. G., Gruber, B., Lafourcade, B., Leitão, P. J., Münkemüller, T., McClean, C., Osborne, P. E., Reineking, B., Schröder, B., Skidmore, A. K., Zurell, D., and Lautenbach, S. (2013). Collinearity: a review of methods to deal with it and a simulation study evaluating their performance. Ecography 36, 27–46.
Collinearity: a review of methods to deal with it and a simulation study evaluating their performance.Crossref | GoogleScholarGoogle Scholar |

Elith, J., Kearney, M., and Phillips, S. (2010). The art of modelling range-shifting species. Methods in Ecology and Evolution 1, 330–34210.1111/J.2041-210X.2010.00036.X

Elith, J., Phillips, S. J., Hastie, T., Dudík, M., Chee, Y. E., and Yates, C. J. (2011). A statistical explanation of MaxEnt for ecologists. Diversity and Distributions 17, 43–57.
A statistical explanation of MaxEnt for ecologists.Crossref | GoogleScholarGoogle Scholar |

Engeman, R. M. (2005). Indexing principles and a widely applicable paradigm for indexing animal populations. Wildlife Research 32, 203–210.
Indexing principles and a widely applicable paradigm for indexing animal populations.Crossref | GoogleScholarGoogle Scholar |

Engeman, R. M., Constantin, B., Nelson, M., Woolard, J., and Bourassa, J. (2001). Monitoring changes in feral swine abundance and spatial distribution. Environmental Conservation 28, 235–240.
Monitoring changes in feral swine abundance and spatial distribution.Crossref | GoogleScholarGoogle Scholar |

Engeman, R. M., Massei, G., Sage, M., and Gentle, M. N. (2013). Monitoring wild pig populations: a review of methods. Environmental Science and Pollution Research 20, 8077–8091.
Monitoring wild pig populations: a review of methods.Crossref | GoogleScholarGoogle Scholar | 23881593PubMed |

Evans, M. C., Possingham, H. P., and Wilson, K. A. (2011). What to do in the face of multiple threats? Incorporating dependencies within a return on investment framework for conservation. Diversity and Distributions 17, 437–450.
What to do in the face of multiple threats? Incorporating dependencies within a return on investment framework for conservation.Crossref | GoogleScholarGoogle Scholar |

Field, S. A., Tyre, A. J., and Possingham, H. P. (2005). Optimizing allocation of monitoring effort under economic and observational constraints. The Journal of Wildlife Management 69, 473–482.
Optimizing allocation of monitoring effort under economic and observational constraints.Crossref | GoogleScholarGoogle Scholar |

Fitzpatrick, M. C., Preisser, E. L., Ellison, A. M., and Elkinton, J. S. (2009). Observer bias and the detection of low-density populations. Ecological Applications 19, 1673–1679.
Observer bias and the detection of low-density populations.Crossref | GoogleScholarGoogle Scholar | 19831062PubMed |

Gentle, M., Speed, J., and Marshall, D. (2015). Consumption of crops by feral pigs (Sus scrofa) in a fragmented agricultural landscape. Australian Mammalogy 37, 194–200.
Consumption of crops by feral pigs (Sus scrofa) in a fragmented agricultural landscape.Crossref | GoogleScholarGoogle Scholar |

Giambelluca, T. W., Chen, Q., Frazier, A. G., Price, J. P., Chen, Y.-L., Chu, P.-S., Eischeid, J. K., and Delparte, D. M. (2012). Online rainfall atlas of Hawai‘i. Bulletin of the American Meteorological Society 94, 313–316.
Online rainfall atlas of Hawai‘i.Crossref | GoogleScholarGoogle Scholar |

Guisan, A., and Zimmermann, N. E. (2000). Predictive habitat distribution models in ecology. Ecological Modelling 135, 147–186.
Predictive habitat distribution models in ecology.Crossref | GoogleScholarGoogle Scholar |

Guisan, A., and Thuiller, W. (2005). Predicting species distribution: offering more than simple habitat models. Ecology Letters 8, 993–1009.
Predicting species distribution: offering more than simple habitat models.Crossref | GoogleScholarGoogle Scholar |

Hauser, C. E., and McCarthy, M. A. (2009). Streamlining ‘search and destroy’: cost-effective surveillance for invasive species management. Ecology Letters 12, 683–692.
Streamlining ‘search and destroy’: cost-effective surveillance for invasive species management.Crossref | GoogleScholarGoogle Scholar | 19453617PubMed |

Hess, S. C. (2016). A tour de force by Hawaii’s invasive mammals: establishment, takeover, and ecosystem restoration through eradication. Mammal Study 41, 47–60.
A tour de force by Hawaii’s invasive mammals: establishment, takeover, and ecosystem restoration through eradication.Crossref | GoogleScholarGoogle Scholar |

Hijmans, R. J., Van Etten, J., Cheng, J., Mattiuzzi, M., Sumner, M., Greenberg, J. A., and Ghosh, A. (2017). Package ‘raster’: Geographic data analysis and modeling. Available at https://cran.r-project.org/web/packages/raster/raster.pdf

Hirzel, A., and Guisan, A. (2002). Which is the optimal sampling strategy for habitat suitability modelling. Ecological Modelling 157, 331–341.
Which is the optimal sampling strategy for habitat suitability modelling.Crossref | GoogleScholarGoogle Scholar |

Holtfreter, R. W., Williams, B. L., Ditchkoff, S. S., and Grand, J. B. (2008). Feral pig detectability with game cameras. Proceedings of the Annual Conference of the Southeastern Association of Fish and Wildlife Agencies 62, 17–21.

Hone, J. (2002). Feral pigs in Namadgi National Park, Australia: dynamics, impacts and management. Biological Conservation 105, 231–242.
Feral pigs in Namadgi National Park, Australia: dynamics, impacts and management.Crossref | GoogleScholarGoogle Scholar |

IUCN (2017). The IUCN Red List of Threatened Species. Version 2017-3. Available at http://www.iucnredlist.org (accessed 18 May 2018).

Kéry, M., Spillmann, J. H., Truong, C., and Holderegger, R. (2006). How biased are estimates of extinction probability in revisitation studies?. Journal of Ecology 94, 980–986.
How biased are estimates of extinction probability in revisitation studies?.Crossref | GoogleScholarGoogle Scholar |

Keuling, O., Sange, M., Acevedo, P., Podgorski, T., Smith, G., Scandura, M., Apollonio, M., Ferroglio, E., and Vicente, J. (2018). Guidance on estimation of wild boar population abundance and density: methods, challenges, possibilities. EFSA Supporting Publications 15, 1449E.
Guidance on estimation of wild boar population abundance and density: methods, challenges, possibilities.Crossref | GoogleScholarGoogle Scholar |

LaPointe, D. A., Atkinson, C. T., and Samuel, M. D. (2012). Ecology and conservation biology of avian malaria: ecology of avian malaria. Annals of the New York Academy of Sciences 1249, 211–226.
Ecology and conservation biology of avian malaria: ecology of avian malaria.Crossref | GoogleScholarGoogle Scholar | 22320256PubMed |

Maggini, R., Guisan, A., and Cherix, D. (2002). A stratified approach for modeling the distribution of a threatened ant species in the Swiss National Park. Biodiversity and Conservation 11, 2117–2141.
A stratified approach for modeling the distribution of a threatened ant species in the Swiss National Park.Crossref | GoogleScholarGoogle Scholar |

Massei, G., and Genov, P. (2004). The environmental impact of wild boar. Galemys 16, 135–145.

Massei, G., Coats, J., Lambert, M. S., Pietravalle, S., Gill, R., and Cowan, D. (2018). Camera traps and activity signs to estimate wild boar density and derive abundance indices. Pest Management Science 74, 853–860.
Camera traps and activity signs to estimate wild boar density and derive abundance indices.Crossref | GoogleScholarGoogle Scholar |

Moore, J. L., Hauser, C. E., Bear, J. L., Williams, N. S. G., and McCarthy, M. A. (2011). Estimating detection–effort curves for plants using search experiments. Ecological Applications 21, 601–607.
Estimating detection–effort curves for plants using search experiments.Crossref | GoogleScholarGoogle Scholar | 21563589PubMed |

Nogueira-Filho, S. L. G., Nogueira, S. S. C., and Fragoso, J. M. V. (2009). Ecological impacts of feral pigs in the Hawaiian Islands. Biodiversity and Conservation 18, 3677.
Ecological impacts of feral pigs in the Hawaiian Islands.Crossref | GoogleScholarGoogle Scholar |

Norouzzadeh, M. S., Nguyen, A., Kosmala, M., Swanson, A., Palmer, M. S., Packer, C., and Clune, J. (2018). Automatically identifying, counting, and describing wild animals in camera-trap images with deep learning. Proceedings of the National Academy of Sciences 115, E5716–E5725.
Automatically identifying, counting, and describing wild animals in camera-trap images with deep learning.Crossref | GoogleScholarGoogle Scholar |

Parker, J. D., Burkepile, D. E., and Hay, M. E. (2006). Opposing effects of native and exotic herbivores on plant invasions. Science 311, 1459–1461.
Opposing effects of native and exotic herbivores on plant invasions.Crossref | GoogleScholarGoogle Scholar | 16527979PubMed |

Pimental, D. (2007). Environmental and economic costs of vertebrate species invasions into the United States. In ‘Managing Vertebrate Invasive Species: Proceedings of an International Symposium, National Wildlife Research Center, Fort Collins, CO’. (Eds G. W. Witmer, W. C. Pitt, and K. A. Fagerstone.).

R Core Team (2017). R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.

Rovero, F., and Marshall, A. R. (2009). Camera trapping photographic rate as an index of density in forest ungulates. Journal of Applied Ecology 46, 1011–1017.
Camera trapping photographic rate as an index of density in forest ungulates.Crossref | GoogleScholarGoogle Scholar |

Rowcliffe, J. M., Field, J., Turvey, S. T., and Carbone, C. (2008). Estimating animal density using camera traps without the need for individual recognition. Jouurnal of Applied Ecology 45, 1228–1236.
Estimating animal density using camera traps without the need for individual recognition.Crossref | GoogleScholarGoogle Scholar |

Sarre, S. D., MacDonald, A. J., Barclay, C., Saunders, G. R., and Ramsey, D. S. L. (2013). Foxes are now widespread in Tasmania: DNA detection defines the distribution of this rare but invasive carnivore. Journal of Applied Ecology 50, 459–468.
Foxes are now widespread in Tasmania: DNA detection defines the distribution of this rare but invasive carnivore.Crossref | GoogleScholarGoogle Scholar |

Silveira, L., Jácomo, A. T. A., and Diniz-Filho, J. A. F. (2003). Camera trap, line transect census and track surveys: a comparative evaluation. Biological Conservation 114, 351–355.
Camera trap, line transect census and track surveys: a comparative evaluation.Crossref | GoogleScholarGoogle Scholar |

Silver, S. C., Ostro, L. E. T., Marsh, L. K., Maffei, L., Noss, A. J., Kelly, M. J., Wallace, R. B., Gómez, H., and Ayala, G. (2004). The use of camera traps for estimating jaguar Panthera onca abundance and density using capture/recapture analysis. Oryx 38, 148–154.
The use of camera traps for estimating jaguar Panthera onca abundance and density using capture/recapture analysis.Crossref | GoogleScholarGoogle Scholar |

Southwell, C., and Low, M. (2009). Black and white or shades of grey? Detectability of Adélie penguins during shipboard surveys in the Antarctic pack-ice. Journal of Applied Ecology 46, 136–143.
Black and white or shades of grey? Detectability of Adélie penguins during shipboard surveys in the Antarctic pack-ice.Crossref | GoogleScholarGoogle Scholar |

Thomas, J. F., Engeman, R. M., Tillman, E. A., Fischer, J. W., Orzell, S. L., Glueck, D. H., Felix, R. K., and Avery, M. L. (2013). Optimizing line intercept sampling and estimation for feral swine damage levels in ecologically sensitive wetland plant communities. Environmental Science and Pollution Research 20, 1503–1510.
Optimizing line intercept sampling and estimation for feral swine damage levels in ecologically sensitive wetland plant communities.Crossref | GoogleScholarGoogle Scholar | 22707203PubMed |

Tulloch, V. J., Tulloch, A. I., Visconti, P., Halpern, B. S., Watson, J. E., Evans, M. C., Auerbach, N. A., Barnes, M., Beger, M., Chadès, I., Giakoumi, S., McDonald-Madden, E., Murray, N. J., Ringma, J., and Possingham, H. P. (2015). Why do we map threats? Linking threat mapping with actions to make better conservation decisions. Frontiers of Ecology and the Environment 13, 91–99.
Why do we map threats? Linking threat mapping with actions to make better conservation decisions.Crossref | GoogleScholarGoogle Scholar |

Vaughan, I. P., and Ormerod, S. J. (2003). Improving the quality of distribution models for conservation by addressing shortcomings in the field collection of training data. Conservation Biology 17, 1601–1611.
Improving the quality of distribution models for conservation by addressing shortcomings in the field collection of training data.Crossref | GoogleScholarGoogle Scholar |

Venables, W. N., and Ripley, B. D. (2002). ‘Modern Applied Statistics with S.’ (Springer: New York.)

Watson, C. A., Weckerly, F. W., Hatfield, J. S., Farquhar, C. C., and Williamson, P. S. (2008). Presence–nonpresence surveys of golden-cheeked warblers: detection, occupancy and survey effort. Animal Conservation 11, 484–492.
Presence–nonpresence surveys of golden-cheeked warblers: detection, occupancy and survey effort.Crossref | GoogleScholarGoogle Scholar |

Wehr, N. H. (2018). Responses of soil invertebrate and bacterial communities to the removal of nonnative feral pigs (Sus scrofa) from a Hawaiian tropical montane wet forest. M.S. Thesis, University of Hawai’i at Manoa, Hawaii.

Wehr, N. H., Hess, S. C., and Litton, C. M. (2018). Biology and impacts of Pacific islands invasive species. 14. Sus scrofa, the feral pig (Artiodactyla: Suidae). Pacific Science 72, 177–198.

Wickham, H. (2016). ggplot2: Elegant Graphics for Data Analysis. (Springer-Verlag: New York.)

Wilson, K. A., McBride, M. F., Bode, M., and Possingham, H. P. (2006). Prioritizing global conservation efforts. Nature 440, 337–340.
Prioritizing global conservation efforts.Crossref | GoogleScholarGoogle Scholar | 16541073PubMed |

Zeileis, A., Kleiber, C., and Jackman, S. (2008). Regression models for count data in R. Journal of Statistical Software 27, 1–25.
Regression models for count data in R.Crossref | GoogleScholarGoogle Scholar |