Register      Login
Marine and Freshwater Research Marine and Freshwater Research Society
Advances in the aquatic sciences
RESEARCH ARTICLE

Data assimilation in a coupled physical-biological model for the Bohai Sea and the Northern Yellow Sea

Qing Xu A D , Hui Lin A , Yuguang Liu B , Xianqing Lv B and Yongcun Cheng C
+ Author Affiliations
- Author Affiliations

A Institute of Space and Earth Information Science, The Chinese University of Hong Kong, Hong Kong.

B Physical Oceanography Laboratory, Ocean University of China, Qingdao 266100, China.

C Institute of Meteorology, PLA University of Science and Technology, Nanjing 211101, China.

D Corresponding author. Email: xuqing@cuhk.edu.hk

Marine and Freshwater Research 59(6) 529-539 https://doi.org/10.1071/MF07144
Submitted: 8 August 2007  Accepted: 26 April 2008   Published: 19 June 2008

Abstract

One difficulty with coupled physical-biological ocean models is determining optimal values of poorly known model parameters. The variational adjoint assimilation method is a powerful tool for the automatic estimation of parameters. We used this method to incorporate remote-sensed chlorophyll-a data into a coupled physical-biological model developed for the Bohai Sea and the Northern Yellow Sea. A 3-D NPZD model of nutrients (N), phytoplankton (P), zooplankton (Z) and detritus (D) was coupled with a physical model, the Princeton Ocean Model. Sensitivity analysis was carried out to choose suitable control variables from the model parameters. Numerical twin experiments were then conducted to demonstrate whether the spatio-temporal resolutions of the observations were adequate for estimating values of the control variables. Finally, based on the success of the twin experiments, we included remote-sensed chlorophyll-a data in the NPZD model. With the adjoint assimilation of these chlorophyll-a data, the coupled model better describes spring and autumn phytoplankton blooms and the annual cycle of phytoplankton at the surface layer for the study area. The annual cycle of simulated surface nutrient concentrations also agreed well with field observations. The adjoint method greatly improves the modelling capability of coupled ocean models, helping us to better understand and model marine ecosystems.

Additional keywords: adjoint method, control variable, ecosystem.


Acknowledgements

This work was supported by RGC through 461907, by SFMSBRP through grant 973–2007CB411807, by NSF through 40676015/D0601, and by China Postdoctoral Science Foundation (for Cheng). We also thank the editor and reviewers for their valuable suggestions.


References

Baird, M. E. , Timko, P. G. , and Wu, L. (2007). The effect of packaging of chlorophyll within phytoplankton and light scattering in a coupled physical-biological ocean model. Marine and Freshwater Research 58, 966–981.
Crossref | GoogleScholarGoogle Scholar | Bennet A. F. (1992). ‘Inverse Methods in Physical Oceanography.’ (Cambridge University Press: New York.)

Eslinger D. V., Kashiwai M. B., Kishi M. J., Megrey B. A., Ware D. M., and Werner F. E. (2000). Report of the 2000 MODEL Workshop on lower trophic level modeling. PICES Scientific Report 15, 1–77.

Franks, P. J. S. (2002). NPZ models of plankton dynamics: their construction, coupling to physics, and application. Journal of Oceanography 58, 379–387.
Crossref | GoogleScholarGoogle Scholar | Gao H. W. (1998). Analysis and simulation of marine pelagic ecosystem (in Chinese). PhD Thesis, Ocean University of China, Qingdao.

Garcia-Gorriz, E. , Hoepffner, N. , and Ouberdous, M. (2003). Assimilation of SeaWiFS data in a coupled physical-biological model of Adriatic Sea. Journal of Marine Systems 40–41, 233–252.
Crossref | GoogleScholarGoogle Scholar | Lenhart H. J., and Pätsch J. (2001). Daily nutrient loads for the European continental rivers during 1977–1998. In ‘Berichte aus dem Zentrum für Meeres-und Klimaforschung’. (Reihe B: Ozeanographic 40, Hamburg.)

Li, X. , and Wunsch, C. (2004). An adjoint sensitivity study of chlorofluorocarbons in the North Atlantic. Journal of Geophysical Research 109,
Crossref | GoogleScholarGoogle Scholar | Lv X., Liu W. (2001). Study on the adjoint method in data assimilation. Marketing Science 25, 44–50. [in Chinese]

Matear, R. J. (1995). Parameter optimization and analysis of ecosystem models using simulated annealing: A case study at Station P. Journal of Marine Research 53, 571–607.
Crossref | GoogleScholarGoogle Scholar | Mellor G. L. (2004). Users guide for a three-dimensional, primitive equation, numerical ocean model. Program in Atmospheric and Oceanic Science, Princeton University.

Schartau, M. , Oschlies, A. , and Willebrand, J. (2001). Parameter estimates of a zero-dimensional ecosystem model applying the adjoint method. Deep-sea Research. Part II, Topical Studies in Oceanography 48, 1769–1800.
Crossref | GoogleScholarGoogle Scholar | Wunsch C. (1996). ‘The Ocean Circulation Inverse Problem.’ (Cambridge University Press: New York.)

Xu, Q. , Liu, Y. G. , and Lv, X. Q. (2005). Adjoint assimilation in marine ecosystem models and an example of application. Journal of Ocean University of China 4, 14–20.
Crossref | GoogleScholarGoogle Scholar | Xu Q., Liu Y. G., Cheng Y. C., and Lv X. Q. (2006). Adjoint assimilation in a marine ecosystem model: control variables and twin experiments. Chinese High Technology Letters 16, 78–83. [in Chinese]

Yoshimori, A. , Ishizaka, J. , Kono, T. , Kasai, H. , Saito, H. , and Kishi, M. J. , et al. (1995). Modeling of spring bloom in the western subarctic Pacific (off Japan) with observed vertical density structure. Journal of Oceanography 51, 471–488.
Crossref | GoogleScholarGoogle Scholar | Zhao L. (2002). A modeling study of the phytoplankton dynamic in the Bohai Sea (in Chinese). PhD Thesis, Ocean University of China, Qingdao.

Zhao Q., Tian J., Chu Z. (2005). Numerical simulation and data assimilation on the current and the temperature field in the Bohai Sea, the Huanghai Sea and East China Sea. Journal of Wuhan University of Technology 29, 821–825. [in Chinese]