Register      Login
Animal Production Science Animal Production Science Society
Food, fibre and pharmaceuticals from animals
RESEARCH ARTICLE

The PythiumFusarium root disease complex – an emerging constraint to irrigated maize in southern New South Wales

P. R. Harvey A C , R. A. Warren A and S. Wakelin B
+ Author Affiliations
- Author Affiliations

A CSIRO Entomology, PMB 2, Glen Osmond, SA 5064, Australia.

B CSIRO Land and Water, PMB 2, Glen Osmond, SA 5064, Australia.

C Corresponding author. Email: paul.harvey@csiro.au

Australian Journal of Experimental Agriculture 48(3) 367-374 https://doi.org/10.1071/EA06091
Submitted: 14 March 2006  Accepted: 27 August 2007   Published: 4 February 2008

Abstract

A pathogen-selective fungicide trial was established at a site with a history of continuous maize cultivation with stubble retention to assess the impacts of Pythium, Fusarium and Rhizoctonia root diseases on maize productivity. High soilborne populations of Pythium and Fusarium were detected at sowing, with no significant differences in their distributions across the site. Significant increases in Fusarium and Pythium isolates were recovered from maize rhizosphere soils after the first 12 weeks of crop growth. While no isolates of phytopathogenic Rhizoctonia were recovered from soil or maize roots, 63 and 100% of roots examined were colonised by Pythium and Fusarium spp., respectively. Fungicides were, therefore, ineffective in suppressing rhizosphere fungal populations and inhibiting root infection and disease development. As a result, there were no significant increases in crop establishment, early crop growth (biomass) or grain yields with any of the pathogen-selective treatments. DNA sequencing identified six Pythium and five Fusarium spp. from infected maize roots (internal transcribed spacer 5.8s rDNA) and rhizosphere soils (rDNA and translation elongation factor-1α). These species have previously been reported as saprophytes on crop residues and as components of a root-disease complex contributing to seedling damping-off and root and stem rots of maize. Growth responses of rotation crops grown in natural and sterilised continuous maize soil indicated that soilborne root pathogens significantly reduced biomass production of maize and wheat, but not Adzuki bean and canola. Fungal isolation frequencies from these crops implied host-mediated selection of Pythium but not Fusarium spp., the former showing a preference for and greater pathogenicity towards maize and wheat.


References


Altschul SF, Madden TL, Schäffer AA, Zhang J, Zheng Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25, 3389–3402.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Backhouse D, Burgess LW (2002) Climatic analysis of the distribution of Fusarium graminearum, F. pseudograminearum and F. culmorum on cereals in Australia. Australasian Plant Pathology 31, 321–327.
Crossref | GoogleScholarGoogle Scholar | open url image1

Burgess LW (1981) General ecology of the fusaria. In ‘Fusarium: diseases, biology and taxonomy’. (Eds PE Nelson, TA Toussoun, RJ Cook) pp. 225–235. (Pennsylvania State University Press: University Park, PA)

Burgess LW, Summerell BA, Bullock S, Gott KP, Backhouse D (1994) ‘Laboratory manual for Fusarium research.’ 3rd edn. (University of Sydney: Sydney)

Cook RJ (2001) Management of wheat and barley diseases in modern farming systems. Australasian Plant Pathology 30, 119–126.
Crossref | GoogleScholarGoogle Scholar | open url image1

Cother EJ, Gilbert RL (1992) Distribution of Pythium arrhenomanes in rice growing soils of southern New South Wales. Australasian Plant Pathology 21, 79–82.
Crossref | GoogleScholarGoogle Scholar | open url image1

Dewan MM, Sivasithamparam K (1988) Pythium species in roots of wheat and rye grass in Western Australia and their effect on root rot caused by Gaeumannomyces graminis var. tritici. Soil Biology & Biochemistry 20, 801–808.
Crossref | GoogleScholarGoogle Scholar | open url image1

Duffy BK, Ownley BH, Weller DM (1997) Soil chemical and physical properties associated with suppression of take-all in wheat by Trichoderma koningii. Phytopathology 87, 1118–1124.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Edel V, Steinberg C, Gautheron N, Alabouvette C (1997) Populations of non-pathogenic Fusarium oxysporum associated with roots of four plant species compared to soil populations. Phytopathology 87, 693–697.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Harman GE, Howell CR, Viterbo A, Chet I, Lorito M (2004) Trichoderma species – opportunistic, avirulent plant symbionts. National Review of Microbiology 2, 43–56.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Harvey PR (2004) Crop rotation could reduce Pythium root rot. Farming Ahead 154, 38–40. open url image1

Harvey PR, Butterworth PJ, Hawke BH, Pankhurst CE (2000) Genetic variation among populations of Pythium irregulare in southern Australia. Plant Pathology 49, 619–627.
Crossref | GoogleScholarGoogle Scholar | open url image1

Harvey PR, Butterworth PJ, Hawke BG, Pankhurst CE (2001a) Genetic and pathogenic variation among cereal, medic and sub-clover isolates of Pythium irregulare. Mycological Research 105, 85–93.
Crossref | GoogleScholarGoogle Scholar | open url image1

Harvey PR, Langridge P, Marshall DR (2001b) Genetic drift and host-mediated selection cause genetic differentiation among Gaeumannomyces graminis populations infecting cereals in southern Australia. Mycological Research 105, 927–935.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Hoagland DR, Arnon DI (1938) The water culture method of growing plants without soil. University of California Agricultural Experiment Station Circular 347, pp. 36–39.

Holloway GJ, Henry FJ, Excell GK, Abubakar A (1999) The incidence and causal agents of crown rot in wheat crops in western Victoria. In ‘Proceedings of the first Australasian soilborne disease symposium’. (Ed. RC Magarey) pp. 199–200. (Bureau of Sugar Experimental Stations: Brisbane)

Kong P, Richardson PA, Moorman GW, Hong C (2004) Single-strand conformational polymorphism analysis of the ribosomal internal transcribed spacer 1 for rapid species identification within the genus Pythium. FEMS Microbiology Letters 240, 229–236.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Martin FN, Loper JE (1999) Soilborne plant diseases caused by Pythium spp. : ecology, epidemiology and prospects for biological control. Critical Reviews in Plant Sciences 18, 111–181.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Murray GM, Brennan JP (2001) Prioritising threats to the grains industry. GRDC Technical Report, Project DAN438.

O’Donnell K, Kistler HC, Cigelnik E, Ploetz RC (1998) Multiple evolutionary origins of the fungus causing panama-disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proceedings of the National Academy of Sciences of the United States of America 95, 2044–2049.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Otero JT, Ackerman JD, Bayman P (2004) Differences in mycorrhizal preferences between two tropical orchids. Molecular Ecology 13, 2393–2404.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Pankhurst CE, McDonald HJ, Hawke BH (1995) Influence of tillage and crop rotation on the epidemiology of Pythium infections of wheat in a red-brown earth of South Australia. Soil Biology & Biochemistry 27, 1065–1073.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Pankhurst CE, Hawke BH, McDonald HJ (1998) Role of root disease in the poor establishment of Medicago pastures after cereal cropping in South Australia. Plant Pathology 47, 749–758. open url image1

Pe ME, Gianfranceshi L, Taramino G, Tarachini R, Angelini P, Dani M, Binelli G (1993) Mapping quantitative trait loci (QTLs) for resistance to Gibberella zeae infection in maize. Molecular & General Genetics 241, 11–16.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Ryder MH, Warren RA, Harvey PR, Tang W, Yang H, Zhang X, Zhang B (2005) Recent advances in biological control of soil-borne root diseases of wheat, vegetables, and cotton in China and Australia. Shandong Science 18, 1–8. open url image1

Ryley MJ, Obst NR, Irwin JAG, Drenth A (1998) Changes in the racial composition of Phytophthora sojae in Australia between 1979 and 1996. Plant Disease 82, 1048–1054.
Crossref | GoogleScholarGoogle Scholar | open url image1

Sewell GWF (1981) Effects of Pythium species on the growth of apple and their possible role in replant disease. Annals of Applied Biology 97, 31–42. open url image1

Singleton LL, Mihail JD, Rush CM (1992) ‘Methods for research on soil-borne phytopathogenic fungi.’ (American Phytopathological Society Press: St Paul, MN)

Stack J (1999) Common stalk rot disease of corn. Plant Disease 6, 1–8. open url image1

Summerell BA, Burgess LW (1988) Stubble management practices and the survival of Fusarium graminearum group 1 in wheat stubble residues. Australasian Plant Pathology 17, 88–93.
Crossref | GoogleScholarGoogle Scholar | open url image1

Van der Plaats-Niterink AJ (1981) Monograph of the genus Pythium. Studies in Mycology 21, 1–242. open url image1

Wakelin SA, Warren RA, Harvey PR, Ryder MH (2004) Phosphate solubilization by Penicillium spp. closely associated with wheat roots. Biology and Fertility of Soils 40, 36–43.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Wang B, Dale ML, Kochman JK, Allen SJ, Obst NR (1999) Variations in soil populations of Fusarium oxysporum f. sp. vasinfectum as influenced by fertiliser application and growth of different crops. Australasian Plant Pathology 28, 174–181.
Crossref | GoogleScholarGoogle Scholar | open url image1

Wang PH, Wang YT, White JG (2003) Species-specific PCR primers for Pythium developed from ribosomal ITS1 region. Letters in Applied Microbiology 37, 127–132.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

White DG (2000) ‘Compendium of corn diseases.’ (American Phytopathological Society Press: St Paul, MN)

White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In ‘PCR protocols: a guide to methods and applications’. (Eds MA Innis, DH Gelfand, JJ Sninsky, TJ White) pp. 315–322. (Academic Press: San Diego, CA)

Yang DE, Zhang CL, Wang YG (2002) Review of maize stalk rot in China. Journal of Maize Science 1, 4. open url image1

Yang DE, Zhang CL, Zhang DS, Jin DM, Weng ML, Chen SJ, Nguyen H, Wang B (2004) Genetic analysis and molecular mapping of maize (Zea mays L.) stalk rot resistance gene Rfg1. Theoretical and Applied Genetics 108, 706–711.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Yergeau E, Filion M, Vujanovic V, St-Arnaud M (2005) A PCR-denaturing gradient gel electrophoresis approach to assess Fusarium diversity in asparagus. Journal of Microbiological Methods 60, 143–154.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

You MP, Sivasithamparam K, Riley IT, Barbetti MJ (2000) The occurrence of root-infecting fungi and parasitic nematodes in annual Medicago species in Western Australian pastures. Australian Journal of Agricultural Research 51, 435–444.
Crossref | GoogleScholarGoogle Scholar | open url image1