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Protocols in ecological and environmental plant physiology


Crop and Pasture Science is a highly cited and prestigious journal publishing original research on advances in plant sciences, sustainable farming systems, and food quality. More

Editors-in-Chief: Sergio Atienza and Zed Rengel


blank image Crop and Pasture Science
Volume 67 Number 5 2016

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The history of using rainfall data to improve production in the grain industry in Australia—from Goyder to ENSO 
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Derek Yates , R. Willem Vervoort , Budiman Minasny and Alex McBratney
pp. 467-479

Rainfall is the major driver for dryland wheat yields across Australia, and there is a long tradition of research into rainfall distributions and trends in Australia. The aim of this study is to review the history of rainfall data collection, and the efficacy and persistence of different rainfall indices, analytical methods and related forecasts for grain production. Increasing spatial and temporal data density might offer opportunities to revisit simple indicators as seasonal forecasts, which, in combination with climate models and crop models, may deliver new insights and future value for grain producers.


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Physiological response cascade of spring wheat to soil warming and drought 
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D. F. Weldearegay , F. Yan , S. K. Rasmussen , S.-E. Jacobsen and F. Liu
pp. 480-488

Genotypic diversity in response to drought and heat stress, individually or in combination, of three spring wheat cultivars was investigated. In all cultivars, stomatal conductance was the most sensitive variable to drought, followed by photosynthetic rate, leaf water potential and relative water content the least. The different sensitivity of stomatal conductance to soil drying between the three cultivars reveal their adaptability to different drought and/or heat stress scenarios, which could be used for selecting suitable cultivars grown in a certain environment.


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Quantitative analysis of gene actions controlling root length under water stress in spring wheat (Triticum aestivum L.) genotypes 
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Habtamu Ayalew , Hui Liu and Guijun Yan
pp. 489-494

Understanding the genetic control of agronomic traits is important to better design a crop improvement program. We studied the genetic control of root length under water stress and found that genotypes with longer roots have more dominant genes than others. Drought resistant genotypes can be developed by incorporating genotypes with more dominant genes into a wheat breeding program.


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Soil amendment with biochar increases maize yields in a semi-arid region by improving soil quality and root growth 
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Qian Xiao , Li-Xia Zhu , Hong-Pei Zhang , Xiu-Yun Li , Yu-Fang Shen and Shi-Qing Li
pp. 495-507

Biochar has been widely proposed to farmland soils as a promising approach to improve soil quality and crop productivity. To clarify the soil–root–shoot interactions, we conduct a 2-year field trail and found that biochar additions optimize soil physico-chemical properties and thereby improve crop root growth, which eventually enhance grain yield and crop nutrient level. These beneficial results can provide the scientific basis for large scale application of biochar.


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Resource-use maximisation through legume intercropping with maize in the eastern Himalayan region of India 
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V. K. Choudhary , Anil Dixit and Bhagirath S. Chauhan
pp. 508-519

Intercropping of maize with peanut at 1 : 5 and 1 : 2 row proportions gave the highest maize equivalent yield with better system productivity over maize alone. Higher row proportion of intercrops suppressed the weed growth and nutrient mining by weeds as well. Soil moisture content and solar radiation interception was judiciously utilized with higher row proportions. The energy indices were improved with intercropping and obtained higher energy use efficiencies.


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The frequency of herbicide-resistant wild oat (Avena spp.) populations remains stable in Western Australian cropping fields 
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Mechelle J. Owen and Stephen B. Powles
pp. 520-527

Random surveys conducted in Western Australia have shown that herbicide resistance in major crop weeds is increasing. The latest survey in Avena revealed that 48% of populations displayed resistance to Group A herbicides while resistance to Groups B and K were detected for the first time. Resistance has remained stable over the last five years; however, non-herbicidal options are also needed to sustain these cropping systems in the future.


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A comparative proteomic study of drought-tolerant and drought-sensitive soybean seedlings under drought stress 
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X. Yu , A. T. James , A. Yang , A. Jones , O. Mendoza-Porras , C.-A. Bétrix , H. Ma and M. L. Colgrave
pp. 528-540

Drought is a major factor limiting plant growth reducing yield in crops. We compared the changes in proteins in drought-tolerant and drought-sensitive soybean leaves under water restriction and showed that the two types responded differently to drought stress. The different response patterns in proteins may be potentially used for screening and selecting candidate soybean lines to improve drought tolerance and assist in the production of drought-tolerant soybean varieties.


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NB-LRR gene family required for Rsc4-mediated resistance to Soybean mosaic virus 
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Na Li , Jin Long Yin , Cui Li , Da Gang Wang , Yong Qing Yang , A. Karthikeyan , He Xiang Luan and Hai Jian Zhi
pp. 541-552

The Rsc4 gene confer resistance to SMV was previously mapped to Ch14 and three candidate genes encoding NB-LRR proteins was localized in this region. Among these genes, mRNA level and coding sequence are different between resistant and susceptible cultivar. Silencing this three genes make plants more susceptible to SMV indicates that at least one of them is required for the resistance.


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Comparative responses to water deficit stress and subsequent recovery in the cultivated beet Beta vulgaris and its wild relative B. macrocarpa 
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Inès Slama , Asma Jdey , Aida Rouached , Ons Talbi , Ahmed Debez , Tahar Ghnaya , Mohamed Anis Limami and Chedly Abdelly
pp. 553-562

The physiology of B. macrocarpa under limiting water supply has not been yet studied. Thus, the present work aims to investigate the behaviour of two Tunisian provenances of B. macrocarpa to water deficit stress. Enfidha, the most drought tolerant provenance, could be used in the marginal arid ecosystems in order to limit the deficit in fodder and to improve the pastoral value of these regions.


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Lucerne yield, water productivity and persistence under variable and restricted irrigation strategies 
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M. E. Rogers , A. R. Lawson and K. B. Kelly
pp. 563-573

Lucerne is a resilient forage species that has potential in irrigation regions when water may be limited. Research which restricted the volume of irrigation water applied to lucerne stands revealed that, although DM production was reduced under water stress, the lucerne stands were able to fully recover once full irrigation was resumed. This suggests that lucerne is an ideal species to grow under irrigation in situations with limited water.


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Intercropping black oat (Avena strigosa) and annual ryegrass (Lolium multiflorum) can increase pasture leaf production compared with their monocultures 
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Paulo G. Duchini , Gabriela C. Guzatti , Henrique M. N. Ribeiro-Filho and André F. Sbrissia
pp. 574-581

Leaves production is a key point in based grasslands livestock production systems. We tested the hypothesis that intercropping two annual forage species can increase total and leaf forage production compared with their monocultures. It is suggested that intercropping black oat and annual ryegrass does not change their tiller ontogenetic processes and that the association of their different size and shape could increase pasture leaf production over their monocultures.


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Published online 08 June 2016
Single independent genes confer resistance to faba bean rust (Uromyces viciae-fabae) in the current Australian cultivar Doza and a central European line Ac1655 
Kedar N. Adhikari, Peng Zhang, Abdus Sadeque, Sami Hoxha and Richard Trethowan

Faba bean rust, caused by Uromyces viciae-fabae, is an important disease of faba beans in the most faba bean growing areas. Our studies showed a wide variation for rust resistance in the Australian faba bean germplasm and a cultivar Doza and a central European line Ac1655 each carried single and independent genes for resistance. Detection of at least two rust resistant genes and potential of finding more provide ample opportunities for improving the rust resistance in faba bean.

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These articles have been peer reviewed and accepted for publication. They are still in production and have not been edited, so may differ from the final published form.

    CP16073  Accepted 23 June 2016
    High-temperature adult-plant (HTAP) stripe rust (Puccinia striiformis f. sp. tritici) resistance in facultative winter wheat
    Beyhn Akın, Xian-Ming Chen, Alexsey Morgounov, Nusret Zencirci, Anmin Wan, Meinan Wang

    CP16159  Accepted 16 June 2016
    Seeding rate and cultivar effects on canola (Brassica napus) competition with volunteer wheat (Triticum aestivum)
    Deirdre Lemerle, David Luckett, Eric Koetz, Trent Potter, Hanwen Wu

    CP16149  Accepted 14 June 2016
    Genotypic evaluation of introduced white clover (Trifolium repens L.) germplasm in New Zealand
    Zulfi Jahufer, John Ford, Derek Woodfield, Brent Barrett

    CP16094  Accepted 12 June 2016
    Light extinction of wheat as affected by N fertilization and plant parameters
    A. Soleymani, Mohammad Miransari

    CP16102  Accepted 03 June 2016
    Low-Cost Automated Biochemical Phenotyping for Optimised Nutrient Quality Components in Ryegrass Breeding
    Luke Pembleton, Junping Wang, German Spangenberg, John Forster, Noel Cogan

    CP16153  Accepted 01 June 2016
    Trends in grain production and yield gaps in the high rainfall zone of southern Australia
    Michael Robertson, John Kirkegaard, Allan Peake, Zoe Creelman, Lindsay Bell, Julianne Lilley, Jon Midwood, Heping Zhang, Susan Kleven, Chris Duff, Roger Lawes, Penny Riffkin

    CP16052  Accepted 30 May 2016
    Vegetative nitrogen stress decreases lodging risk and increases yield of irrigated spring wheat in the subtropics.
    Allan Peake, Kerry Bell, Peter Carberry, Nick Poole, Steven Raine

    CP15386  Accepted 06 May 2016
    Study of genotype by environment interaction in tall fescue genotypes and their polycross progenies based on AMMI model analysis in Iran
    Mohammad Reza Dehghani, Mohammad Mahdi Majidi, Aghafakhr Mirlohi, Ghodratollah Saeidi

    CP15250  Accepted 02 May 2016
    Economic and environmental implications of wheat crop sequences on organic dairy farm simulations
    Daniel Abreu, Aaron Hoshide, Ellen Mallory, Erin Roche, André Oliveira, Richard Kersbergen, Rogério Lana, Mozart Fonseca

    CP16091  Accepted 02 May 2016
    Forage and grain yield of common buckwheat in Mediterranean conditions: response to sowing time and irrigation
    Marco Mariotti, Alessandro Masoni, Iduna Arduini

    CP16027  Accepted 14 April 2016
    Interactions between water and nitrogen in Australian cropping systems: physiological, agronomic, economic, breeding and modelling perspectives
    Victor Sadras, P Hayman, Daniel Rodriguez, Marta Monjardino, Martin Bielich, Murray Unkovich, Barry Mudge, Enli Wang

    CP16056  Accepted 29 April 2016
    Recent changes in Southern Australian frost occurrence: implications for wheat production risk
    Steven Crimp, Bangyou Zheng, Nirav Khimashia, David Gobbett, Scott Chapman, Mark Howden, Neville Nicholls

    CP16087  Accepted 24 April 2016
    Expression of amphicarpy in Vigna lanceolata morphotypes and their hybrids and implications for cultivar development
    Bob Lawn, Leone Bielig

    CP15338  Accepted 05 April 2016
    Variation in drought tolerance components and their interrelationships in the core collection of foxtail millet germplasm
    L. Krishnamurthy, Hari Upadhyaya, Junichi Kashiwagi, Ramamoorthy Purushothaman, Sangam Dwivedi, Vincent Vadez

    CP15102  Accepted 04 April 2016
    Diversity for resistance to a moderately virulent bluegreen aphid (Acyrthosiphon kondoi Shinji) population in Trifolium species.
    Alan Humphries, Steve Robinson, David Hawkey, David Peck, Trevor Rowe, Carolyn de Koning, Allen Newman

    CP15226  Accepted 04 April 2016
    Zaid Bello, Sue Walker

    CP15312  Accepted 01 April 2016
    A PCR-based marker closely linked to a 2BS QTL conferring wheat yellow spot resistance for marker assisted breeding
    Fei Ren, Jun Ji, Hui Liu, Martin Barbetti, Kadambot Siddique, Chunji Liu, Guijun Yan

    CP15241  Accepted 29 March 2016
    The effect of water table depth and salinity on growth dynamics of Rhodes grass (Chloris gayana).
    Sebastián Chiacchiera, Nicolás Bertram, Edith Taleisnik, Esteban Jobbágy

    CP15184  Accepted 29 March 2016
    The shift of plant N origins alters C and N assimilation during reproductive stages of soybean grown in a Mollisol
    Yansheng Li, Xiaobing Liu, Guanghua Wang, Zhenhua Yu, Ulrike Mathesius, Judong Liu, Stephen Herbert, Jian Jin

    CP16038  Accepted 25 March 2016
    Berry quality and antioxidant properties in Vitis vinifera L. cv. Tempranillo as affected by clonal variability, mycorrhizal inoculation and temperature
    Nazareth Torres, Nieves Goicoechea, Fermín Morales, María Carmen Antolín

    CP16015  Accepted 21 March 2016
    Maize roots acidify the rhizosphere less, and release less organic acid and acid phosphatase, than faba bean in response to phosphorus deficiency
    Haitao Liu, Philip White, Chunjian Li

    CP14363  Accepted 20 March 2016
    Effects of irrigating forage turnips, Brassica rapa var. rapa cv. Barkant, during different periods of vegetative growth 3. Irrigation water use efficiency, evapotranspiration and effective use of water.
    Barry Rowe, James Neilsen

    CP15421  Accepted 07 March 2016
    Canopy application of film antitranspirants over the reproductive phase enhances yield and yield-related physiological traits of water stressed oilseed rape (Brassica napus L.).
    Michele Faralli, Ivan Grove, Martin Hare, Roger Boyle, Kevin Williams, Fiona Corke, Peter Kettlewell

    CP15331  Accepted 04 March 2016
    Rice cold tolerance across reproductive stages
    Jaquie Mitchell, Siti Zulkafli, Jocelyn Bosse, Bradley Campbell, Peter Snell, Emma Mace, Ian Godwin, Shu Fukai

    CP16014  Accepted 02 March 2016
    Genetic compatibility among morphotypes of Vigna lanceolata and implications for breeding improved cultivars
    Bob Lawn, Hang Vu, Leone Bielig, Andrzej Killian

    CP15260  Accepted 01 March 2016
    Cradle-to-farm gate greenhouse gas emissions for 2-year wheat monoculture and break crop-wheat sequences in south-eastern Australia
    Pip Brock, Sally Muir, David Herridge, Aaron Simmons

    CP15417  Accepted 23 February 2016
    Waterlogging at tillering affects spike and spikelet formation in wheat
    Iduna Arduini, Cecilia Orlandi, Silvia Pampana, Alessandro Masoni

    CP15385  Accepted 23 February 2016
    Cell membrane stability and chlorophyll content variation in wheat (Triticum aestivum L) genotypes under heat and drought conditions
    Shoaib Ur Rehman, Muhammad Bilal, Rashid Rana, Muhammad Tahir, Muhammad Shah, Habtamu Ayalew, Guijun Yan

    CP15400  Accepted 12 February 2016
    Tropical dairy pasture yield and nitrogen cycling: Effect of urea application rate and a nitrification inhibitor (DMPP)
    Jack Koci, Paul Nelson

    CP15198  Accepted 01 February 2016
    Genotypic stability of weed competitive ability for bread wheat (Triticum aestivum) genotypes in multiple environments
    Michael Zerner, Greg Rebetzke, Gurjeet Gill

    CP15319  Accepted 29 January 2016
    Calibration of Grassmaster II to estimate green and dry matter yield in Mediterranean pastures: effects of pasture moisture content
    João Serrano, Shakib Shahidian, José Silva

    CP15311  Accepted 29 January 2016
    Using 33P to trace in situ the fate of canola below-ground phosphorus including wheat uptake in two contrasting soils
    Foyjunnessa Foyjunnessa, Annie McNeill, Ashlea Doolette, Sean Mason, Mike McLaughlin

    CP15204  Accepted 28 January 2016
    Physiological and molecular characterization of alfalfa (Medicago sativa L.) germplasm with improved seedling freezing tolerance
    Rokebul Anower, Anne Fennell, Arvid Boe, Ivan Mott, Michael Peel, Yajun Wu

    CP15271  Accepted 27 January 2016
    Effects of Fe3O4 nanoparticles and iron chelate on the antioxidant capacity and nutritional value of soil cultivated maize (Zea mays) plants
    Mahboobeh Jalali, F Ghanati, Seyed Ali Mohammad Modarres Sanavy

    CP15257  Accepted 24 January 2016
    Competition and growth of a grass-legume mixture fertilized with nitrogen and phosphorus: effect on nutrient acquisition, root morphology and symbiosis with soil microorganisms
    Rodolfo Mendoza, Ileana García, Daniela Depalma, Carolina Férnandez López

    CP15278  Accepted 20 January 2016
    Nitrogen fertiliser requirements of high-yielding irrigated transgenic cotton
    Ian J. (dec.) Rochester, Michael Bange

    CP15337  Accepted 08 January 2016
    Control of water leakage from below the root zone by summer-active pastures is associated with persistence, density and deep rootedness
    Malcolm McCaskill, Gavin Kearney

    CP15206  Accepted 23 December 2015
    Application of Prognostic Breeding in Maize
    Vasileios Greveniotis, Vasilia Fasoula

    CP15289  Accepted 23 December 2015
    Fall dormancy regulates the expression of cas18, vsp and corF genes during cold acclimation of alfalfa (Medicago sativa L.)
    Zhiying Liu

    CP15285  Accepted 16 December 2015
    Quality potential of synthetic-derived commercial wheat cultivars in southwestern China
    Yonglu Tang, Chaosu Li, Wuyun Yang, Yuanqi Wu, Xiaoli Wu, Chun Wu, Xiaoling Ma, Shizhao Li, Rosewarne Garry

    CP15107  Accepted 22 November 2015
    Contribution of apigenin di-C-glycoside (ACG) and lutein to the colour of yellow alkaline noodles (YAN)
    Grace Wijaya, Clare Ingram, Robert Asenstorfer, Daryl Mares

    CP13382  Accepted 22 November 2013
    Forage Breeding for Changing Environments and Production Systems – an Overview of ISFB 2013
    Kevin Smith, German Spangenberg

    CP13154  Accepted 08 June 2013
    Effect of Irrigation Regimes on Spring Seeding of Canola Cultivars under Semi-Arid and High Elevation Conditions
    Jamshid Razmjoo, Seyed Eatesam Ghaemmaghami

    CP13156  Accepted 14 May 2013
    The career and contribution to Australian and International Agricultural Science of Clive McDonald Francis: An introduction
    Mike Ewing, David Chatel, Michael Poole, William Collins


The Most Read ranking is based on the number of downloads from the CSIRO PUBLISHING website of articles published in the previous 12 months. Usage statistics are updated daily.

Rank Paper Details
1. Published 30 September 2015
Morphological, physiological and yield responses of durum wheat to pre-anthesis water-deficit stress are genotype-dependent

Haipei Liu, Iain R. Searle, Diane E. Mather, Amanda J. Able and Jason A. Able

2. Published 29 October 2015
Adaptation of wheat, barley, canola, field pea and chickpea to the thermal environments of Australia

Victor Sadras and M. Fernanda Dreccer

3. Published 31 July 2015
Can wheat varietal mixtures buffer the impacts of water deficit?

Paul Adu-Gyamfi, Tariq Mahmood and Richard Trethowan

4. Published 4 September 2015
Assessing the place and role of crop simulation modelling in Australia

M. J. Robertson, G. J. Rebetzke and R. M. Norton

5. Published 29 February 2016
Frost-tolerance genes Fr-A2 and Fr-B2 in Australian wheat and their effects on days to heading and grain yield in lower rainfall environments in southern Australia

H. A. Eagles, Jayne Wilson, Karen Cane, Neil Vallance, R. F. Eastwood, Haydn Kuchel, P. J. Martin and Ben Trevaskis

6. Published 24 June 2015
QTL mapping for plant height and yield components in common wheat under water-limited and full irrigation environments

Xingmao Li, Xianchun Xia, Yonggui Xiao, Zhonghu He, Desen Wang, Richard Trethowan, Huajun Wang and Xinmin Chen

7. Published 30 September 2015
Saline water irrigation of quinoa (Chenopodium quinoa) under Mediterranean conditions

Attila Yazar, Çigdem Incekaya, S. Metin Sezen and Sven-Erik Jacobsen

8. Published 24 June 2015
Yield gain due to fungicide application in varieties of winter wheat (Triticum aestivum) resistant and susceptible to leaf rust

Alex Morgounov, Beyhan Akin, Lütfi Demir, Mesut Keser, Alma Kokhmetova, Sergey Martynov, Şinasi Orhan, Fatih Özdemir, Ïzzet Özseven, Zagipa Sapakhova and Minura Yessimbekova

9. Published 29 January 2016
Soil compaction and controlled traffic considerations in Australian cotton-farming systems

Diogenes L. Antille, John McL. Bennett and Troy A. Jensen

10. Published 4 September 2015
Statistical methods for analysis of multi-harvest data from perennial pasture variety selection trials

Joanne De Faveri, Arūnas P. Verbyla, Wayne S. Pitchford, Shoba Venkatanagappa and Brian R. Cullis

11. Published 29 October 2015
Sequential zinc and iron biofortification of bread-wheat grains: from controlled to uncontrolled environments

Fernando C. Lidon, Ana S. Almeida, Ana R. Costa, Ana S. Bagulho, Paula Scotti-Campos, José N. Semedo, Benvindo Maçãs, José Coutinho, Nuno Pinheiro, Conceição Gomes, António E. Leitão, Isabel P. Pais, Maria M. Silva, Fernando H. Reboredo, Maria F. Pessoa and José C. Ramalho

12. Published 6 May 2016
Nitrogen management to optimise canola production in Australia

R. M. Norton

13. Published 30 September 2015
Impacts of endophyte infection of ryegrass on rhizosphere metabolome and microbial community

S. Wakelin, S. Harrison, C. Mander, B. Dignam, S. Rasmussen, S. Monk, K. Fraser and M. O'Callaghan

14. Published 29 January 2016
Nitrogen uptake efficiency of maize in monoculture and intercropped with Brachiaria humidicola and Panicum maximum in a dystrophic Red-Yellow Latosol of the Brazilian Cerrado

Thais Rodrigues Coser, Maria Lucrécia Gerosa Ramos, Cícero Célio de Figueiredo, Segundo Urquiaga, Arminda Moreira de Carvalho, Filipe Vieira Barros and Maria Thereza Mendonça

15. Published 29 October 2015
In search of photosensitising compounds in the annual forage legume Biserrula pelecinus L.

E. Swinny, C. K. Revell, N. Campbell, E. Spadek and C. Russo

16. Published 29 February 2016
Timing and rates of nitrogen fertiliser application on seed yield, quality and nitrogen-use efficiency of canola

B. L. Ma and A. W. Herath

17. Published 29 October 2015
Effect of the maize–soybean intercropping system on the potential bioavailability of magnesium, iron and zinc

Vesna Dragicevic, Snezana Oljaca, Milovan Stojiljkovic, Milena Simic, Zeljko Dolijanovic and Natalija Kravic

18. Published 29 January 2016
Pasture mixes with lucerne (Medicago sativa) increase yields and water-use efficiencies over traditional pastures based on subterranean clover (Trifolium subterraneum)

M. R. McCaskill, M. C. Raeside, S. G. Clark, C. MacDonald, B. Clark and D. L. Partington

19. Published 31 May 2016
The history of using rainfall data to improve production in the grain industry in Australia—from Goyder to ENSO

Derek Yates, R. Willem Vervoort, Budiman Minasny and Alex McBratney

20. Published 24 June 2015
Water use, transpiration efficiency and yield in cowpea (Vigna unguiculata) and peanut (Arachis hypogaea) across water regimes

Oumarou Halilou, Falalou Hamidou, Boulama Katzelma Taya, Saadou Mahamane and Vincent Vadez

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