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Protocols in ecological and environmental plant physiology

 
 

Functional Plant Biology publishes new and significant information on the functional biology of plants at all scales from the molecular through whole plant to community. More

Editor-in-Chief: Rana Munns

 
 
 

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Published online 06 June 2013
Quantifying the relationship between temperature regulation in the ear and floret development stage in wheat (Triticum aestivum L.) under heat and drought stress 
Frederick T. Steinmeyer, Martin Lukac, Matthew P. Reynolds and Hannah E. Jones

The relationship between temperature depression in the ears of wheat and flower development stage under heat and drought stress was examined. The early stages of anthesis were associated with a lower ear temperature than later stages, indicating that temperature depression occurs in the ear under stress and potentially during the heat-sensitive flower development stages. This pioneering study provides a framework for correlating ear temperature and grain yield under stressed conditions.

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Published online 04 June 2013
Early increased expression of a cyclin-dependant protein kinase (LtCDKA1;1) during inflorescence initiation of the long day grass Lolium temulentum 
Greg F. W. Gocal and Rod W. King

Understanding flowering is important for manipulating growth, seed production and yield of grasses and cereals. A feature of the floral transition is large increases in cell division at the shoot apex, but little is known about expression of cell cycle-related genes. In the grass Lolium temulentum, expression of one such regulatory gene, LtCDKA1;1, increases 6 h after the end of a florally inductive long day which precedes by 12–24 h that of an AP1 gene homologue involved in floral organ specification.

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Published online 03 June 2013
The involvement of the mitochondrial peroxiredoxin PRXIIF in defining physiological differences between orthodox and recalcitrant seeds of two Acer species 
Ewelina Ratajczak, Elke Ströher, Marie-Luise Oelze, Ewa M. Kalemba, Stanis?awa Pukacka and Karl-Josef Dietz

Peroxiredoxines (PRXs) function as thiol-dependent peroxidases and modulate redox-dependent signalling during plant development and adaptation to environmental conditions. PRXIIF was investigated during progressive desiccation of orthodox and recalcitrant Acer seeds and decreased protein amounts, incomplete phosphorylation and alternation at the transcript level were detected in desiccation-sensitive seeds. Seed development, maturation, dormancy and germination are accompanied by production of reactive oxygen species, PRXs undergo phases of oxidation and participate in defining the physiological differences between contrary category seeds.

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Published online 03 June 2013
Improvement of salt and waterlogging tolerance in wheat: comparative physiology of Hordeum marinum-Triticum aestivum amphiploids with their H. marinum and wheat parents 
Saud A. Alamri, Edward G. Barrett-Lennard, Natasha L. Teakle and Timothy D. Colmer

One way to improve the growth of crops on saltland is to introduce adapted genes from relevant wild germplasm. We tested the salt and waterlogging tolerance of amphiploids developed using a single wheat variety and four accessions of sea barleygrass (Hordeum marinum), a plant naturally adapted to saltland. The amphiploids expressed useful traits such as low leaf Na+ and high root porosity.

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Published online 03 June 2013
The source of nitrogen (NH4+ or NO3) affects the concentration of oxalate in the shoots and the growth of Atriplex nummularia (oldman saltbush) 
Hussein Al Daini, Hayley C. Norman, Paul Young and Edward G. Barrett-Lennard

High concentrations of oxalate in leaves can lower the nutritive value of halophytic fodder plants. We studied the effects of nitrogen source on oxalate in a clone of oldman saltbush (Atriplex nummularia). After 24 days growth, plants supplied with ammonium instead of nitrate had 75% lower concentrations of oxalate in shoots, but also 57% less shoot dry mass.

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Published online 03 June 2013
A segmentation procedure using colour features applied to images of Arabidopsis thaliana 
Ruben Ispiryan, Igor Grigoriev, Wolfgang zu Castell and Anton R. Schäffner

The major challenge in plant phenotyping based on image analysis lies in the difficulty to discriminate relevant features from unimportant background information. We propose two approaches solving this problem, one applying methods from machine learning and a second one allowing user interaction. Although the approaches are presented for phenotyping of Arabidopsis thaliana, they can likewise be applied to feature extraction of digital images in other contexts.

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Published online 29 May 2013
Estimation of the steady-state cyclic electron flux around PSI in spinach leaf discs in white light, CO2-enriched air and other varied conditions 
Jiancun Kou, Shunichi Takahashi, Riichi Oguchi, Da-Yong Fan, Murray R. Badger and Wah Soon Chow

In photosynthesis, electrons derived from water are driven uphill in a linear fashion as well as in a loop or cycle, both flows helping to convert CO2 into sugars. This study estimates the hitherto elusive rate of cyclic flow in leaves in CO2-enriched air. Estimates of cyclic flow will help to assess its role and elucidate its regulation in efficient photosynthesis.

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Published online 29 May 2013
Production of high oleic rice grains by suppressing the expression of the OsFAD2-1 gene 
Ella Simone Zaplin, Qing Liu, Zhongyi Li, Vito M. Butardo, Christopher L. Blanchard and Sadequr Rahman

Fatty acid composition is critical for the quality of rice bran oil and storage of brown rice. Suppressing the expression of the OsFAD2–1 enzyme increases the content of oleic acid at the expense of linoleic and palmitic acid in rice grains. Oil from the transgenic rice is expected to be highly stable. The low linoleic acid content should improve the stability of rice oil and brown rice during storage.

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Published online 22 May 2013
Overexpression of GsCBRLK from Glycine soja enhances tolerance to salt stress in transgenic alfalfa (Medicago sativa) 
Xi Bai, Jing Liu, Lili Tang, Hua Cai, Ming Chen, Wei Ji, Ying Liu and Yanming Zhu

Much existing irrigated land is threatened by salinisation, so breeding high salt-tolerant plants is necessary to improve land use efficiency. In order to breed high salt-tolerant plants, transgenic alfalfa plants overexpressing GsCBRLK are generated, and the salt tolerance is significantly increased. Transgenic alfalfa grew well under high salinity conditions, so we hope transgenic alfalfa can be used to ameliorate salt-affected soils.

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Published online 16 May 2013
Tropical forest responses to increasing atmospheric CO2: current knowledge and opportunities for future research 
Lucas A. Cernusak, Klaus Winter, James W. Dalling, Joseph A. M. Holtum, Carlos Jaramillo, Christian Körner, Andrew D. B. Leakey, Richard J. Norby, Benjamin Poulter, Benjamin L. Turner and S. Joseph Wright

Elevated atmospheric CO2 concentrations ([CO2]) will affect the metabolism of tropical forests worldwide; however, critical aspects of the response largely remain unknown. Here, we review the current state of knowledge, aiming to provide a framework that can guide future experimental research. Tropical forest CO2 enrichment experiments are urgently needed to test predictions of tropical forest functioning as atmospheric [CO2] rises.

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Published online 16 May 2013
Reactive oxygen species regulation and antioxidant defence in halophytes 
Rengin Ozgur, Baris Uzilday, Askim Hediye Sekmen and Ismail Turkan

Salinity and drought are increasing problems that humanity will face during the 21st century because of climate change. Halophytes can live in soils with a high concentration of salt, and deploy a range of responses to salinity that confers on them more tolerance to salt than seen in glycophytes. Induction of an antioxidant defence system is one of these responses. The antioxidant defence system protects plants against reactive oxygen species and regulates their level for stress signalling. An understanding of these mechanisms in halophytes may provide information for increasing stress tolerance of crop plants.

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Published online 14 May 2013
Are soluble carbohydrates ecologically relevant for salt tolerance in halophytes? 
Ricardo Gil, Monica Boscaiu, Cristina Lull, Inmaculada Bautista, Antonio Lidón and Oscar Vicente

Soil salinity is one of the most important environmental factors that reduce crop yields in agriculture and limit plant distribution in nature. In this review, we discuss evidence supporting a functional role of soluble carbohydrates in salt tolerance mechanisms, although their ecological relevance remains largely unknown. We propose that more effort should be invested in field studies of salt-tolerant plants, as a complement to more common experimental approaches based on the analysis of salt-sensitive models under artificial laboratory conditions.

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Published online 13 May 2013
Delayed water loss and temperature rise in floral buds compared with leaves of Brassica rapa subjected to a transient water stress during reproductive development 
Yi Ming Guo, Sheng Chen, Matthew N. Nelson, Wallace Cowling and Neil C. Turner

The relationship between water loss in leaves and in floral buds in Brassica species has rarely been studied. The different responses of the leaf and bud in B. rapa has demonstrated a ‘self-adjustment’ mechanism in which the floral bud maintains stomatal function longer into a drying cycle than the leaf. The study suggests that bud temperature may be a useful indicator of drought tolerance in B. rapa.

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Published online 08 May 2013
Sensors and imaging techniques for the assessment of the delay of wheat senescence induced by fungicides 
Carlos Andres Berdugo, Anne-Katrin Mahlein, Ulrike Steiner, Heinz-Wilhelm Dehne and Erich-Christian Oerke

This study assessed changes in the senescence of wheat plants treated with different fungicidal compounds using innovative sensor methods. Senescence-associated changes (degradation of photosynthetic pigments, photosynthetic activity, leaf reflectance and transpiration of plant tissue) were detected using ground-based optical sensors earlier than with destructive and visual methods. Noninvasive sensors and imaging techniques are an excellent alternative to traditional screening methods for assessing the side-effects of fungicides on plant physiology.

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Published online 08 May 2013
External heat-pulse method allows comparative sapflow measurements in diverse functional types in a Mediterranean-type shrubland in South Africa 
Robert P. Skelton, Adam G. West, Todd E. Dawson and Jenny M. Leonard

Divergent responses of coexisting species to short- and long-term climatic conditions may be significant in diverse floras, particularly those occurring in highly pulse-driven environments. Our aim was to test the efficacy of miniature external sapflow gauges for capturing physiological response of diverse coexisting functional types, including small monocotyledonous species. Our data show that the gauges approximate measures of transpiration well and that they will allow important fundamental ecophysiological questions to be investigated in future studies.

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Published online 08 May 2013
The effects of cane girdling before budbreak on shoot growth, leaf area and carbohydrate content of Vitis vinifera L. Sauvignon Blanc grapevines 
Mark Eltom, Mike Trought and Chris Winefield

The carbohydrate availability of a developing grapevine shoot has a direct influence on shoot architecture and leaf development. The initial rate of shoot growth will determine its ability to develop adequate leaf area, which is required for growth. An estimation of the carbohydrates present in a cane or shoot can be determined by using the shoot’s or cane’s cross-sectional area, or by using the total leaf area of the shoot.

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Published online 29 April 2013
Transpiration sensitivities to evaporative demand and leaf areas vary with night and day warming regimes among wheat genotypes 
Rémy Schoppach and Walid Sadok

Climate change is currently driving important wheat yield decreases worldwide as a result of dryer and warmer conditions. In this study we investigated the impacts of different day and night warming scenarios on key yield-determining traits directly related to the plant’s water use in order to identify potentially tolerant cultivars and the underlying tolerance strategies among a panel of 11 breeding and commercial bread and durum wheat lines. Large variability among cultivars was found, indicating common responses and also different coping strategies that could help in breeding next-generation cultivars adapted to warmer climates.

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Published online 24 April 2013
Interactive effects of boron and NaCl stress on water and nutrient transport in two broccoli cultivars 
María del Carmen Rodríguez-Hernández, Diego A. Moreno, Micaela Carvajal and María del Carmen Martínez BallestaA

In arid regions, high NaCl levels in the aquifers, and wastewater contaminated with boron have adverse effects on crops. We determined the water transport and membrane integrity of two broccoli cultivars in response to NaCl–B interaction with aquaporin involvement. An antagonistic effect of the NaCl–B interaction was observed in cv. Naxos through changes in the root hydraulic conductivity and biomass restoration, making Naxos appropriate for saline–boron irrigation.

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Published online 23 April 2013
Salt stress, signalling and redox control in seeds 
Ilse Kranner and Charlotte E. Seal

Surprisingly little is known about the effects of salt stress upon seeds given their pivotal role in plant reproduction and dispersal. This review provides information on redox control in seeds, detoxification mechanisms and tolerance in relation to seed metabolism and performance. Implications of redox control in seeds on the physiological, biochemical and molecular level are discussed; the review concludes with a perspective on future research in relation to salt stress and seed biology.

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Published online 22 April 2013
Halophyte anti-oxidant feedback seasonality in two salt marshes with different degrees of metal contamination: search for an efficient biomarker 
Bernardo Duarte, Dinis Santos and Isabel Caçador

In contaminated estuaries, halophytes can be subjected to high levels of metal contamination that inevitably affect their metabolism, namely, their anti-oxidant systems. Considering the more abundant halophyte species in Tagus estuary salt marshes, Spartina maritima proved to be potentially efficient biomonitor species. Also its enzymatic anti-oxidant system revealed a substantial increase of activity under contaminated conditions. Considering this, Spartina maritima and its anti-oxidant enzymatic defences arise as potential biomonitor species and biomarker for heavy metal contamination studies.

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Published online 22 April 2013
Plant proteome responses to salinity stress – comparison of glycophytes and halophytes 
Klára Kosová, Pavel Vítámvás, Milan Oldřich Urban and Ilja Tom Prášil

Proteome studies can provide important insights into plant responses to salinity stress since proteins are directly involved in mechanisms of stress response and tolerance acquisition. In this review, recent knowledge of proteome response to salinity is summarised with a focus on comparative studies revealing similarities and differences between related plant species with contrasting salinity tolerance – glycophytes and halophytes. The contribution of proteomic studies to a complex picture of plant salinity response is discussed.

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Published online 09 April 2013
Properties of the halophyte microbiome and their implications for plant salt tolerance 
Silke Ruppel, Philipp Franken and Katja Witzel

Plant-inhabiting micro-organisms have a crucial impact on plant growth and health. Specialised bacterial and fungal communities live inside and on the surface of halophytes and may significantly contribute to the salt tolerance of their host. This review analyses the opportunity that the native microbial world offers crop plants to enlarge their growing space into salt affected areas.

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Published online 05 April 2013
Hydraulic conductance of intact plants of two contrasting sorghum lines, SC15 and SC1205 
Sunita Choudhary, Thomas R. Sinclair and P. V. Vara Prasad

Crops, especially sorghum, are vulnerable to dry periods during the growing season that can result in yield loss. Alteration of the hydraulic conductance in the plant offers the possibility for regulated water loss from the crop to minimize the impact of drought. The results of this study with two sorghum varieties showed differences in hydraulic characteristics and that this trait does indeed offer the possibility for improving crop water use and increased yields.

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Published online 05 April 2013
A survey of the natural variation in biomechanical and cell wall properties in inflorescence stems reveals new insights into the utility of Arabidopsis as a wood model 
Colleen P. MacMillan, Philip J. O'Donnell, Anne-Marie Smit, Rob Evans, Zbigniew H. Stachurski, Kirk Torr, Mark West, Jacqueline Baltunis and Timothy J. Strabala

Examination of the variation of Arabidopsis thaliana from diverse locations has led to breakthroughs in understanding genes that control many important traits. Until now, the variation in A. thaliana wood properties was unknown; our assessment of 12 accessions shows that significant variation exists in wood-like growth characteristics, proportions of cell wall components and biomechanics. This hints that large-scale studies will yield genes that are important to wood formation and properties.

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Published online 05 April 2013
Ripening of grape berries can be advanced or delayed by reagents that either reduce or increase ethylene levels 
Christine Böttcher, Katie E. Harvey, Paul K. Boss and Christopher Davies

The role of ethylene in controlling the development of nonclimacteric fruit is unclear. Application experiments using an ethylene-releasing compound and an ethylene biosynthesis inhibitor, as well as changes in expression of ethylene biosynthesis and perception genes, provide evidence for the complex involvement of ethylene in grape berry ripening. The ripening-altering properties of ethylene could benefit the wine industries in the face of environmental changes due to climate change.

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Published online 02 April 2013
Balancing salinity stress responses in halophytes and non-halophytes: a comparison between Thellungiella and Arabidopsis thaliana 
Dorothea Bartels and Challabathula Dinakar

Soil salinity is a major factor limiting plant productivity. A small group of plants – termed halophytes – are able to grow in saline soils. Here, the knowledge of the adaptation mechanisms of the halophytes is reviewed.

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Published online 02 April 2013
Germanium as a tool to dissect boron toxicity effects in barley and wheat 
Julie E. Hayes, Margaret Pallotta, Ute Baumann, Bettina Berger, Peter Langridge and Tim Sutton

In boron-toxic soils, boron accumulates in the leaves of wheat and barley, causing leaf necrosis. Although progress has been made towards identifying the mechanisms and genes responsible for limiting boron’s entry into plants, it is unclear why some tolerant plants develop fewer toxicity symptoms. We show that the symptoms of germanium toxicity mimic those of boron toxicity. Germanium may be used to dissect the genetic control of symptom development.

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Published online 21 March 2013
Tolerance of extreme salinity in two stem-succulent halophytes (Tecticornia species) 
Jeremy P. English and Timothy D. Colmer

Some stem-succulent halophytes inhabit areas of very high salinity, such as inland salt lakes. Tolerance and physiological responses to extreme salinity (2000 mM NaCl) were evaluated for two Tecticornia species; both were highly tolerant. Growth patterns of halophytic species on the margins of salt lakes are likely influenced both by soil salinity and water availability (periodic floods and water deficits).

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Published online 21 March 2013
An economic point of view of secondary compounds in halophytes 
Anne Buhmann and Jutta Papenbrock

Owing to global climate change, salt-tolerant plants are more and more important due to their natural stress tolerance. Their potential as sources of valuable and so far unknown compounds is largely unexploited and needs to be investigated in detail. Our overview identifies open research questions and gives suggestions for future applications of secondary compounds of halophytes.

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Published online 19 March 2013
The importance of iron supply during repetitive harvesting of Aster tripolium 
Yvonne Ventura, Malika Myrzabayeva, Zerekbay Alikulov, Shabtai Cohen, Zion Shemer and Moshe Sagi

In an attempt to develop Aster tripolium L. as a halophyte vegetable for saline irrigation on dune sand, it was observed that sequential harvesting resulted in leaf chlorosis, yield reduction, reduced nitrate reductase activity (NRA) and enhanced nitrate concentration. Application of suitable Fe-chelates restored leaf colour, NRA and nitrate content indicating that NRA can be an indicator for iron deficiency in A. tripolium.

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Published online 15 March 2013
Halophytes as sources of metals in estuarine systems with low levels of contamination 
Thiago Couto, Bernardo Duarte, Dimitri Barroso, Isabel Caçador and João C. Marques

In this work the metal concentration in three plants species (Scirpus maritimus, Spartina maritima and Zostera noltii) of the Mondego Estuary was analysed. Analysing the concentration of metals in the aboveground and belowground organs and in the sediment was possible conclude that the Mondego Estuary as a low contaminated system could act as a source of metals for nearly systems.

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Published online 13 March 2013
Bioaccumulation of heavy metals in Spartina 
Susana Redondo-Gómez

Heavy metal pollution is a major environmental problem that is rapidly gaining importance due to its impact on human health through the food chain. Phytoremediation is considered an effective, low cost, preferred cleanup option for moderately contaminated areas. In this context, the available literature on heavy metal bioaccumulation by Spartina sp. was compiled and compared.

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Published online 07 March 2013
Analysis of the expression of terpene synthase genes in relation to aroma content in two aromatic Vitis vinifera varieties 
Fabiola Matarese, Giancarlo Scalabrelli and Claudio D'Onofrio

Grape flavour management requires knowledge of the derivation of individual aroma characteristics, the main constituents of which are terpenoids. Information about the expression patterns of the genes that are responsible for terpenoid biosynthesis is important. The genes identified in this study on terpene synthase gene transcript profiling in different tissues of two aromatic grapevine varieties will be of interest to viticulturists to improve decision making along the chain of production.

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Published online 07 March 2013
Differential response of root proteome to drought stress in drought sensitive and tolerant sunflower inbred lines 
Mehdi Ghaffari, Mahmoud Toorchi, Mostafa Valizadeh and Setsuko Komatsu

Nowadays understanding of plants drought tolerance mechanisms is a major challenge for plant biologists. To overcome deficiency of classical methods for further progress, we used a proteomics technique to uncover molecular mechanisms of drought tolerance in sunflower and found that modulating energy usage, water transport and activation of defence system could improve sunflower productivity under drought condition. Development of transgenic plants with increased abundance of the involved proteins could help to increase of vegetative oil production in future.

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Published online 07 March 2013
Comparative performance of δ13C, δ18O and δ15N for phenotyping durum wheat adaptation to a dryland environment 
José Luis Araus, Llorenç Cabrera-Bosquet, María Dolores Serret, Jordi Bort and María Teresa Nieto-Taladriz

The usefulness of non-carbon stable isotope abundances in dry matter as phenotypic tools for selecting plants better adapted to stress remains inconclusive. This study shows for wheat under Mediterranean conditions that carbon followed by nitrogen isotope abundances exhibited useful characteristics, whereas oxygen isotope abundance performed poorly by comparison. The advantages and limitations of the combined use of these isotopes are discussed.

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Published online 06 March 2013
Can early vigour occur in combination with drought tolerance and efficient water use in rice genotypes? 
Maria Camila Rebolledo, Delphine Luquet, Brigitte Courtois, Amelia Henry, Jean-Christophe Soulié, Lauriane Rouan and Michael Dingkuhn

Early vigour and drought tolerance are crucial to increase and stabilise rice yield. We explored the genetic diversity of japonica rice under drought for traits related to early vigour, hydraulic processes and water use. Our results suggested a negative linkage between early vigour and its maintenance under drought. The limits and opportunities for improving drought tolerance in rice without affecting early vigour are discussed.

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Published online 05 March 2013
Improved stomatal regulation and ion partitioning boosts salt tolerance in grafted melon 
Francesco Orsini, Rabab Sanoubar, Golgen Bahar Oztekin, Noemi Kappel, Mahmut Tepecik, Cristina Quacquarelli, Yuksel Tuzel, Stefano Bona and Giorgio Gianquinto

Vegetable grafting is currently adopted for improving plant responses to environmental stresses, such as salinity. Melon scions are generally grafted on interspecific rootstocks. In this study, the different components of salinity stress (osmotic stress, ion toxicity and nutritional imbalance) are addressed in nongrafted, self-grafted and interspecific graftings. Grafting per se improved plant water status, whereas the interspecific rootstock is responsible for reduced ion toxicity and nutritional imbalance.

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Published online 05 March 2013
Changes in xylem tissue and laccase transcript abundance associated with posture recovery in Chamaecyparis obtusa saplings growing on an incline 
Saori Sato, Hideto Hiraide, Masato Yoshida and Hiroyuki Yamamoto

When a gymnosperm grows on an incline, special tissue referred to as ‘compression wood’ forms on the lower side of the stem to restore the stem’s vertical orientation. We observed the posture recovery and stem anatomy of saplings grown on an incline and examined the expression of laccase, which plays a significant role in the formation of compression wood. Based on the results, mechanisms of posture control in gymnosperm trees are suggested.

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Published online 04 March 2013
The integration of activity in saline environments: problems and perspectives 
John M. Cheeseman

Plants have adapted to life in saline environments in a myriad of ways, some more broadly successful than others. These adaptations involve the integration of all activities at levels ranging from genes to physiology to life cycles. With the availability of new ‘-omic’ resources, the tools of systems biology and perhaps forgotten tools of physiology and biophysics, we may now be poised to decipher the complexities of the integration of organismal activities as never before.

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Published online 04 March 2013
The influence of genes regulating transmembrane transport of Na+ on the salt resistance of Aeluropus lagopoides 
Muhammad Zaheer Ahmed, Takayoshi Shimazaki, Salman Gulzar, Akira Kikuchi, Bilquees Gul, M. Ajmal Khan, Hans–W. Koyro, Bernhard Huchzermeyer and Kazuo N. Watanabe

The mechanism of salinity tolerance in halophytes is a key in developing salt tolerant crops. To establish the role of Na+ in salinity tolerance of Aeluropus lagopoides we report here that salinity reduce growth, enhance Na+ secretion and gene expression of V-NHX and PM-NHX through regulating Na+. Our data provide evidence for the support of the role of Na+ in managing growth under saline conditions.

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Published online 11 February 2013
Revisiting an important component of plant genomes: microsatellites 
Caihua Gao, Xiaodong Ren, Annaliese S. Mason, Jiana Li, Wei Wang, Meili Xiao and Donghui Fu

Microsatellites (also called simple repeat sequences) are not ‘junk’ DNA with no function but a ‘jewel’ in plant genomes. We investigated the regularity of generation, evolution and decay of microsatellites, and the relationships among physical structure, variation and functionality of microsatellites. The phenotypic effects of plant microsatellites will increase our understanding of the functionality of repetitive sequences.

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Published online 11 January 2013
The waterlogging/salinity interaction in higher plants revisited – focusing on the hypoxia-induced disturbance to K+ homeostasis 
Edward G. Barrett-Lennard and Sergey N. Shabala

Salinity and waterlogging (oxygen deficiency around the roots) are plant stresses that often occur together on saltland. This combination of stresses impacts on plant growth by decreasing the concentration of potassium and increasing the concentrations of sodium and chloride in shoots. The synchronicity between these changes in ion concentrations has important implications for our understanding of the mechanisms of ion regulation in plants.

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blank image Functional Plant Biology
Volume 40 Number 5 2013

     
 
Descriptive Table of Contents 
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Goldacre Review: The mixotrophic nature of photosynthetic plants 
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Susanne Schmidt, John A. Raven and Chanyarat Paungfoo-Lonhienne
pp. 425-438

Mixotrophy is deemed the exception in terrestrial plants, although there is mounting evidence that plants acquire organic compounds as sources of nutrients. Identifying the mechanisms involved in the acquisition of organic nutrients will provide understanding of the ecological significance of mixotrophy. Here, we discuss mixotrophy in the context of nitrogen and phosphorus nutrition drawing parallels between algae and plants.

 
 

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Genetic variability in high temperature effects on seed-set in sorghum 
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Chuc T. Nguyen, Vijaya Singh, Erik J. van Oosterom, Scott C. Chapman, David R. Jordan and Graeme L. Hammer
pp. 439-448

The increasing frequency of extreme high temperature events threatens stable grain production. We explored the extent of genetic variability for the effect of high temperature on reproductive biology and seed-set in sorghum. The differences identified can be exploited through breeding to develop heat-tolerant varieties for future climates.

 
 

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Expression profile of transcripts encoding cell wall remodelling proteins in tomato fruit cv. Micro-Tom subjected to 15°C storage 
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Gabriela L. Müller, Claudio O. Budde, Martin A. Lauxmann, Agustina Triassi, Carlos S. Andreo, María F. Drincovich and María V. Lara
pp. 449-458

Tomato shelf life is usually limited to a few days; thus, tomatoes are kept at low temperatures to delay ripening and to extend fruit market life. Storage at 4°C caused chilling injury, storage at 15°C delayed ripening preserving fruit quality. In addition, cell wall metabolism is differentially affected at these temperatures. The identification of cell wall enzymes that are modified at 15°C will help in the identification of candidate genes involved in ripening delay but not in the development of chilling injury symptoms.

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Effects of NaCl addition to the growing medium on plant hydraulics and water relations of tomato 
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Patrizia Trifilò, Maria Assunta Lo Gullo, Fabio Raimondo, Sebastiano Salleo and Andrea Nardini
pp. 459-465

Soil salinity is a major limiting factor for crop productivity. This work reports experimental evidence for a role of ion-mediated changes of xylem water transport in the functional response of tomato plants to moderate salinity levels. This is a novel finding with potentially important functional implications for plant physiology and breeding, as it offers a new perspective on plant interaction with salt stress and nutrient availability.

 
 

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Effect of water stress on growth, water use efficiency and gas exchange as related to osmotic adjustment of two halophytes Atriplex spp. 
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Oumelkheir Belkheiri and Maurizio Mulas
pp. 466-474

The effect of water stress on growth and water utilisation was investigated in two Atriplex species: A. halimus and A. nummularia. Water stress induced a decrease in relative water content, water potential and CO2 assimilation for both species, but an increase in water use efficiency and a high accumulation of ABA and total sugars, mainly for A. halimus. Water stress resistance in A. halimus is linked to a higher water use efficiency rather than a greater osmotic adjustment.

 
 

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Water and nutrient relationships between a mistletoe and its mangrove host under saline conditions 
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Luzhen Chen, Li Huang, Xiaofei Li, Siyang You, Shengchang Yang, Yihui Zhang and Wenqing Wang
pp. 475-483

The present study provides the first physiological evidence in the water and nutrient relationships between a hemiparasitic mistletoe and its mangrove host under saline conditions. The mistletoe reduces its transpiration rates (Tr), and has a fundamental limitation in photosynthesis due to low stomatal conductance (gs) and mesophyll conductance (gm). The result still is consistent with the N-parasitism hypothesis, although the mistletoe has low Tr when the nitrogen supply is sufficient.

 
 

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The regulation of antioxidant enzymes in two Plantago species differing in salinity tolerance under combination of waterlogging and salinity 
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Ismail Turkan, Tijen Demiral and Askim Hediye Sekmen
pp. 484-493

Natural waterlogging affects vegetation dynamics in many areas of the world. We aimed to determine the tolerance mechanism of two different Plantago spp. having different salinity tolerance against waterlogging or the combination of salinity and waterlogging stress. Higher tolerance of Plantago maritima (salt-tolerant) than Plantago media (salt-sensitive) seemed to relate higher superoxide dismutase (SOD) and peroxidases (POX) activities. We suggest that a salt-tolerant species might also have a higher tolerance of the combination of waterlogging and salinity stress than a salt-sensitive one.

 
 

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Exogenous abscisic acid reduces water loss and improves antioxidant defence, desiccation tolerance and transpiration efficiency in two spring wheat cultivars subjected to a soil water deficit 
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Yan-Lei Du, Zhen-Yu Wang, Jing-Wei Fan, Neil C. Turner, Jin He, Tao Wang and Feng-Min Li
pp. 494-506

Drenching the soil with the phytohormone abscisic acid slowed the water use of two wheat cultivars subjected to drought and lowered the soil water content at which leaf hydration characteristics were affected. Desiccation tolerance and transpiration efficiency were increased at moderate levels of drought stress, but the grain yield was not increased by the phytohormone treatment. The wheat cultivar released recently maintained its leaf hydration to lower soil water contents and was more drought tolerant to moderate drought stress than an earlier-released cultivar.

 
 

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Root distribution and demography in an avocado (Persea americana) orchard under groundcover management systems 
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Amaya Atucha, Ian A. Merwin, Michael G. Brown, Francisco Gardiazabal, Francisco Mena, Cecilia Adriazola, Marc Goebel and Taryn Bauerle
pp. 507-515

Plants’ capacity to adjust to environmental stresses is a critical factor influencing their performance when living in mixed communities. The aim of our study was to explore root demography and distribution of avocado trees grown under different groundcover management systems. Our results showed that the avocado trees could adapt to more challenging growing conditions by growing less expensive and more efficient roots, with the trade-off of a shorter lifespan.

 
 

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Genetic variation in the root growth response of barley genotypes to salinity stress 
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Megan C. Shelden, Ute Roessner, Robert E. Sharp, Mark Tester and Antony Bacic
pp. 516-530

Soil salinity affects two-thirds of Australian cereal growing regions and results in reduced crop yields and massive losses in revenue. Barley is the fourth most important cereal crop worldwide. This study identifies genetic variation in root growth in barley in response to salinity stress. The identification of genetic diversity will be important in the future development of crop plants with enhanced salt tolerance.

 
 

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These articles have been peer reviewed and accepted for publication. They are still in production and have not been edited, so may differ from the final published form.

    FP13007  Accepted 02 June 2013
    A dynamic model of tomato fruit growth integrating cell division, cell growth and endoreduplication
    Julienne Fanwoua, Pieter Devisser, Ep Heuvelink, Xin-You Yin, Paul Struik, Leo Marcelis
    Abstract


    FP13050  Accepted 31 May 2013
    Molecular cloning and characterization of an ACP thioesterase gene (CocoFatB1) expressed in the endosperm of coconut (Cocos nucifera L.) and its heterologous expression in Nicotiana tobaccum to engineer the accumulation of different fatty acids
    Yijun Yuan, Yinhua Chen, Yuanxue Liang, Shan Yan, Yusheng Zheng, Dongdong LI
    Abstract


    FP12316  Accepted 31 May 2013
    Partitioning hydraulic resistance in Sorghum bicolor leaves reveals unique correlations with stomatal conductance during drought
    Troy Ocheltree, Jesse Nippert, Mary Kirkham, P.V. Vara Prasad
    Abstract


    FP13094  Accepted 30 May 2013
    Fruit thinning affects photosynthetic activity, carbohydrate levels, shoot and fruit development of olive trees grown under semi-arid conditions
    Afef Haouari, Marie-Christine Van Labeke, Kathy Steppe, Mohamed Braham, Mohamed Chaieb
    Abstract


    FP13090  Accepted 29 May 2013
    Plant – aphid interactions with a focus on legumes
    Lars Kamphuis, Katherine Zulak, Lingling Gao, Jonathan Anderson, Karam Singh
    Abstract


    FP13087  Accepted 25 May 2013
    FT genes and regulation of flowering in the legume Medicago truncatula
    Joanna Putterill, Lulu Zhang, Chin Yeoh, Martin Balcerowicz, Mauren Jaudal, Erika Varkonyi-Gasic
    Abstract


    FP13088  Accepted 24 May 2013
    Variation in carbon isotope discrimination and its relationship with harvest index in the reference collection of chickpea germplasm.
    L Krishnamurthy, Junichi Kashiwagi, Satoshi Tobita, Osamu Ito, Hari Upadhyaya, Cholenahalli Gowda, Pooran Gaur, Madavalam Sheshshayee, Sube Singh, Vincent Vadez, Rajeev Varshney
    Abstract


    FP12265  Accepted 20 May 2013
    Cloning, Functional Characterization and Transgenic Manipulation of vitamin E biosynthesis genes of wheat
    Neetu Chaudhary, Paramjit Khurana
    Abstract


    FP13105  Accepted 17 May 2013
    Starch reduction in rice stems due to a lack of OsAGPL1/OsAPL3 decreases grain yield under low irradiance during ripening and modifies plant architecture
    Masaki Okamura, Tatsuro Hirose, Yoichi Hashida, Tohru Yamagishi, Ryu Ohsugi, Naohiro Aoki
    Abstract


    FP13074  Accepted 18 May 2013
    Physiological response of halophytes to multiple stresses
    Karim Ben Hamed, Hasna Ellouzi, Ons Talbi, Kamel Hessini, Ines Slama, Tahar Ghnaya, Sergi Munne-Bosch, Arnould Savoure, Chedly Abdelly
    Abstract


    FP13034  Accepted 17 May 2013
    Physiological perspectives of reduced tillering and stunting in the tiller inhibition (tin) mutant of wheat
    Tesfamichael Kebrom, Richard Richards
    Abstract


    FP12345  Accepted 17 May 2013
    Consequences of elevated temperatures on legume biomass and nitrogen cycling in a field warming and biodiversity experiment in a North American prairie
    Heather Whittington, David Tilman, Jennifer Powers
    Abstract


    FP12387  Accepted 16 May 2013
    The Effect of Hyperosmotic Salinity on Protein Pattern and Enzyme Activities of Halophytes
    Hans-Werner Koyro, Christian Zoerb, Ahmed Debez, Bernard Huchzermeyer
    Abstract


    FP12330  Accepted 14 May 2013
    Proteomic analysis during capsicum ripening reveals differential expression of ACC oxidase isoform 4 and other candidates
    Wan Aizat, Jason Able, James Stangoulis, Amanda Able
    Abstract


    FP12369  Accepted 13 May 2013
    Acclimation of leaf dark respiration to nocturnal and diurnal warming in a semiarid temperate steppe
    Yonggang Chi, Ming Xu, Ruichang Shen, Shiqiang Wan
    Abstract


    FP13023  Accepted 19 April 2013
    Profiling of secondary metabolites in blue lupin inoculated with Phytophthora cinnamomi following phosphite treatment
    Xavier Conlan, Tiffany Gunning, Rhiannon Parker, Gail Dyson, Mike Adams, Neil Barnett, David Cahill
    Abstract


    FP12228  Accepted 04 March 2013
    Seasonal and diurnal variation in stomatal conductance and paraheliotropism of tedera (Bituminaria bituminosa var. albomarginata) in the field.
    Kevin Foster, Megan Ryan, Daniel Real, Padmaja Ramankutty, Hans Lambers
    Abstract




The Most Read ranking is based on the number of downloads from the CSIRO PUBLISHING website of articles published in the previous three years. Usage statistics are updated daily.

Rank Paper Details
1. Published 30 October 2012
Pot size matters: a meta-analysis of the effects of rooting volume on plant growth

Hendrik Poorter, Jonas Bühler, Dagmar van Dusschoten, José Climent and Johannes A. Postma

2. Published 16 September 2011
Drought resistance – is it really a complex trait?

Abraham Blum

3. Published 30 October 2012
The art of growing plants for experimental purposes: a practical guide for the plant biologist

Hendrik Poorter, Fabio Fiorani, Mark Stitt, Uli Schurr, Alex Finck, Yves Gibon, Björn Usadel, Rana Munns, Owen K. Atkin, François Tardieu and Thijs L. Pons

4. Published 26 July 2010
Elevated [CO2] and forest vegetation: more a water issue than a carbon issue?

Joseph A. M. Holtum and Klaus Winter

5. Published 2 July 2010
Soil processes affecting crop production in salt-affected soils

Pichu Rengasamy

6. Published 1 February 2011
Plant nutrient acquisition and utilisation in a high carbon dioxide world

T. R. Cavagnaro, R. M. Gleadow and R. E. Miller

7. Published 30 October 2012
Phenotyping for drought tolerance in grain crops: when is it useful to breeders?

J. B. Passioura

8. Published 17 November 2010
Path of water for root growth

John S. Boyer, Wendy K. Silk and Michelle Watt

9. Published 23 September 2010
Effectors of biotrophic fungal plant pathogens

Pamela H. P. Gan, Maryam Rafiqi, Adrienne R. Hardham and Peter N. Dodds

10. Published 16 February 2012
Water use, water use efficiency and drought resistance among warm-season turfgrasses in shallow soil profiles

Yi Zhou, Christopher J. Lambrides, Ryan Kearns, Changrong Ye and Shu Fukai

11. Published 8 April 2011
Does susceptibility to heat stress confound screening for drought tolerance in rice?

Krishna S. V. Jagadish, Jill E. Cairns, Arvind Kumar, Impa M. Somayanda and Peter Q. Craufurd

12. Published 30 October 2012
GROWSCREEN-Rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons

Kerstin A. Nagel, Alexander Putz, Frank Gilmer, Kathrin Heinz, Andreas Fischbach, Johannes Pfeifer, Marc Faget, Stephan Blossfeld, Michaela Ernst, Chryssa Dimaki, Bernd Kastenholz, Ann-Katrin Kleinert, Anna Galinski, Hanno Scharr, Fabio Fiorani and Ulrich Schurr

13. Published 2 July 2010
The response of barley to salinity stress differs between hydroponic and soil systems

Ehsan Tavakkoli, Pichu Rengasamy and Glenn K. McDonald

14. Published 22 October 2010
Cryo-scanning electron microscopy (CSEM) in the advancement of functional plant biology: energy dispersive X-ray microanalysis (CEDX) applications

Margaret E. McCully, Martin J. Canny, Cheng X. Huang, Celia Miller and Frank Brink

15. Published 23 September 2010
Effectors of plant parasitic nematodes that re-program root cell development

Samira Hassan, Carolyn A. Behm and Ulrike Mathesius

16. Published 17 May 2012
Is transpiration efficiency a viable plant trait in breeding for crop improvement?

Thomas R. Sinclair

17. Published 2 July 2010
Hormonal regulation of source–sink relations to maintain crop productivity under salinity: a case study of root-to-shoot signalling in tomato

Francisco Pérez-Alfocea, Alfonso Albacete, Michel E. Ghanem and Ian C. Dodd

18. Published 12 July 2011
Induction and reversal of crassulacean acid metabolism in Calandrinia polyandra: effects of soil moisture and nutrients

Klaus Winter and Joseph A. M. Holtum

19. Published 23 September 2010
Effector proteins of extracellular fungal plant pathogens that trigger host resistance

Ann-Maree Catanzariti and David A. Jones

20. Published 12 July 2011
Contrasting hydraulic regulation in closely related forage grasses: implications for plant water use

Meisha-Marika Holloway-Phillips and Timothy J. Brodribb


      
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