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Optimal crop canopy architecture to maximise canopy photosynthetic CO2 uptake under elevated CO2 – a theoretical study using a mechanistic model of canopy photosynthesis

Qingfeng Song A B , Guilian Zhang A B and Xin-Guang Zhu A B C
+ Author Affiliations
- Author Affiliations

A CAS Key Laboratory of Computational Biology and CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200031, China.

B State Key Laboratory of Hybrid Rice, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200031, China.

C Corresponding author. Email: zhuxinguang@picb.ac.cn

Functional Plant Biology 40(2) 108-124 https://doi.org/10.1071/FP12056
Submitted: 22 February 2012  Accepted: 26 November 2012   Published: 22 January 2013



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Food and Energy Security. 2016 5(1). p.18
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Xiong Yuzhen, Xie Jia, Zhang Xiaobo, Li Yangyang, Tian Weijiang, Ni Jile, Zhu Zhu, Wang Ying, Wen Xiaozhu, Sang Xianchun
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Xiao Shunfu, Fei Shuaipeng, Li Qing, Zhang Bingyu, Chen Haochong, Xu Demin, Cai Zhibo, Bi Kaiyi, Guo Yan, Li Baoguo, Chen Zhen, Ma Yuntao
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Hubbart Stella, Smillie Ian R. A., Heatley Matthew, Swarup Ranjan, Foo Chuan Ching, Zhao Liang, Murchie Erik H.
Communications Biology. 2018 1(1).
Enhancing C3 photosynthesis: an outlook on feasible interventions for crop improvement
Singh Jitender, Pandey Prachi, James Donald, Chandrasekhar Kottakota, Achary V. Mohan Murali, Kaul Tanushri, Tripathy Baishnab C., Reddy Malireddy K.
Plant Biotechnology Journal. 2014 12(9). p.1217
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Soualiou Soualihou, Wang Zhiwei, Sun Weiwei, de Reffye Philippe, Collins Brian, Louarn Gaëtan, Song Youhong
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Chang Tian-Gen, Zhao Honglong, Wang Ning, Song Qing-Feng, Xiao Yi, Qu Mingnan, Zhu Xin-Guang
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Song Qingfeng, Liu Fusang, Bu Hongyi, Zhu Xin-Guang
Plant Phenomics. 2023 5
Perspectives on improving light distribution and light use efficiency in crop canopies
Slattery Rebecca A, Ort Donald R
Plant Physiology. 2021 185(1). p.34
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Pan Yonghui, Cao Yiwen, Chai Yixiao, Meng Xusheng, Wang Min, Wang Guanjun, Guo Shiwei
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Crops for a future climate
Gleadow Roslyn, Johnson Alexander, Tausz Michael
Functional Plant Biology. 2013 40(2). p.iii
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Qaseem Mirza Faisal, Wu Ai-Min
GCB Bioenergy. 2021 13(1). p.21
Quantifying water-use efficiency in plant canopies with varying leaf angle and density distribution
Ponce de León María A, Bailey Brian N
Annals of Botany. 2024 133(4). p.605
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Sukhova Ekaterina, Ratnitsyna Daria, Gromova Ekaterina, Sukhov Vladimir
Plants. 2022 11(23). p.3285
Toward systems‐level analysis of agricultural production from crassulacean acid metabolism (CAM): scaling from cell to commercial production
Davis Sarah C., Ming Ray, LeBauer David S., Long Stephen P.
New Phytologist. 2015 208(1). p.66
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Perez Raphaël P A, Dauzat Jean, Pallas Benoît, Lamour Julien, Verley Philippe, Caliman Jean-Pierre, Costes Evelyne, Faivre Robert
Annals of Botany. 2018 121(5). p.909
Linking photosynthesis and yield reveals a strategy to improve light use efficiency in a climbing bean breeding population
Keller Beat, Soto Jonatan, Steier Angelina, Portilla-Benavides Ana Elisabeth, Raatz Bodo, Studer Bruno, Walter Achim, Muller Onno, Urban Milan O, Kromdijk Johannes
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Field Crops Research. 2021 274 p.108338
yggdrasil: a Python package for integrating computational models across languages and scales
Lang Meagan
in silico Plants. 2019 1(1).
Dissection of mechanisms for high yield in two elite rice cultivars
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Field Crops Research. 2019 241 p.107563
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Plant, Cell & Environment. 2021 44(7). p.2386
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Bellasio Chandra
Photosynthesis Research. 2019 141(1). p.99
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Rahmawati Dwi, Santika Putri, Fauzi Divanda Rifka Ramadhan, Rosyadi Adnan dan Moch
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Evaluation of six leaf angle distribution functions in the Castillo® coffee variety
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Agronomía Colombiana. 2017 35(1). p.23
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Agricultural and Forest Meteorology. 2016 217 p.101
Use of computational modeling combined with advanced visualization to develop strategies for the design of crop ideotypes to address food security
Christensen A J, Srinivasan Venkatraman, Hart John C, Marshall-Colon Amy
Nutrition Reviews. 2018 76(5). p.332
Daily heliotropic movements assist gas exchange and productive responses in DREB1A soybean plants under drought stress in the greenhouse
Rakocevic Miroslava, Müller Mariele, Matsunaga Fabio Takeshi, Neumaier Norman, Farias José Renato Bouças, Nepomuceno Alexandre Lima, Fuganti‐Pagliarini Renata
The Plant Journal. 2018 96(4). p.801
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Banerjee Koushik, Krishnan P.
Ecological Indicators. 2020 110 p.105947
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Restructuring plant types for developing tailor‐made crops
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Plant Biotechnology Journal. 2023 21(6). p.1106
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Pancaldi Francesco, Trindade Luisa M.
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Source–sink interaction: a century old concept under the light of modern molecular systems biology
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Journal of Experimental Botany. 2017 68(16). p.4417
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Chang Tian-Gen, Chang Shuoqi, Song Qing-Feng, Perveen Shahnaz, Zhu Xin-Guang
in silico Plants. 2019 1(1).
Impact of pod and seed photosynthesis on seed filling and canopy carbon gain in soybean
Cho Young B, Stutz Samantha S, Jones Sarah I, Wang Yu, Pelech Elena A, Ort Donald R
Plant Physiology. 2023 193(2). p.966
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Piao Lin, Zhang Shiyu, Yan Junyao, Xiang Tianxu, Chen Yang, Li Ming, Gu Wanrong
Plants. 2022 11(21). p.2985
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Durand Maxime, Matule Baiba, Burgess Alexandra J., Robson T. Matthew
Agricultural and Forest Meteorology. 2021 308-309 p.108554
On the resolution requirements for accurately representing interactions between plant canopy structure and function in three-dimensional leaf-resolving models
Bailey Brian N, Kent Eric R, Prusinkiewicz Przemyslaw
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The role of OsOFP8 gene in regulating rice leaf angle
Chen Hongjuan, Wan Yao, Teng Kaichong, Liu Binghuan, Zhao Neng, Xu Kaizun, Li Jianxiong
Journal of Plant Biochemistry and Biotechnology. 2023 32(2). p.304
Optimal coordination between photosynthetic acclimation strategy and canopy architecture in two contrasting cucumber cultivars
Pao Yi-Chen, Stützel Hartmut, Chen Tsu-Wei, Zhu Junqi, Long Stephen P
in silico Plants. 2023 5(2).
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Wen Weiliang, Guo Xinyu, Li Baojun, Wang Chuanyu, Wang Yongjian, Yu Zetao, Wu Sheng, Fan Jiangchuan, Gu Shenghao, Lu Xianju
Agricultural and Forest Meteorology. 2019 276-277 p.107594
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Wang Yu, Smith J. Andrew C., Zhu Xin‐Guang, Long Stephen P.
New Phytologist. 2023 239(6). p.2180
A canopy conundrum: can wind-induced movement help to increase crop productivity by relieving photosynthetic limitations?
Burgess Alexandra J, Gibbs Jonathon A, Murchie Erik H
Journal of Experimental Botany. 2019 70(9). p.2371
Evaluation and estimation of light interception and photosynthetic rate of lettuce plants grown under LEDs using 3D-scanned plant modelling
Kim J., Kang W.H., Kim D., Hwang I., Lee H.J., Son J.E.
Acta Horticulturae. 2020 (1296). p.411
Leaf photosynthetic plasticity does not predict biomass responses to growth irradiance in rice
Chen Lin, Luo Wanzhen, Huang Jianliang, Peng Shaobing, Xiong Dongliang
Physiologia Plantarum. 2021 173(4). p.2155
Pampered inside, pestered outside? Differences and similarities between plants growing in controlled conditions and in the field
Poorter Hendrik, Fiorani Fabio, Pieruschka Roland, Wojciechowski Tobias, van der Putten Wim H., Kleyer Michael, Schurr Uli, Postma Johannes
New Phytologist. 2016 212(4). p.838
Quantification of the effects of architectural traits on dry mass production and light interception of tomato canopy under different temperature regimes using a dynamic functional–structural plant model
Chen Tsu-Wei, Nguyen Thi My Nguyet, Kahlen Katrin, Stützel Hartmut
Journal of Experimental Botany. 2014 65(22). p.6399
Scheduling of nitrogen fertilizer topdressing during panicle differentiation to improve grain yield of rice with a long growth duration
Liu Yang, Zhu Xinguang, He Xiaoe, Li Chao, Chang Tiangen, Chang Shuoqi, Zhang Haiqing, Zhang Yuzhu
Scientific Reports. 2020 10(1).
Contrasting leaf‐scale photosynthetic low‐light response and its temperature dependency are key to differences in crop‐scale radiation use efficiency
Wu Alex, Truong Sandra Huynh, McCormick Ryan, van Oosterom Erik J., Messina Carlos D., Cooper Mark, Hammer Graeme L.
New Phytologist. 2024 241(6). p.2435
Photosynthesis in the fleeting shadows: an overlooked opportunity for increasing crop productivity?
Wang Yu, Burgess Steven J., de Becker Elsa M., Long Stephen P.
The Plant Journal. 2020 101(4). p.874
Genotype-specific models for leaf architecture as affected by leaf position and age. Model development and parameterisation using smartphone-based 3D plant scans
Invernizzi Mattia, Paleari Livia, Yang Yubin, Wilson Lloyd T., Buratti Mirko, Zanini Astaldi Adriano, Confalonieri Roberto
Biosystems Engineering. 2022 215 p.249
Mulching and Planting Density on Photosynthesis, Lodging Resistance, and Yield of Maize
Zhao Li, Xie Guangming, Fan Mingyuan, Anwar Sumera, Zhang Qi, Lu Jingying, Zhang Liguang, Gao Fei, Wang Chuangyun
International Journal of Plant Production. 2023 17(4). p.651
Crop/Plant Modeling Supports Plant Breeding: II. Guidance of Functional Plant Phenotyping for Trait Discovery
Zhang Pengpeng, Huang Jingyao, Ma Yuntao, Wang Xiujuan, Kang Mengzhen, Song Youhong
Plant Phenomics. 2023 5
Plants in silico: why, why now and what?—an integrative platform for plant systems biology research
Zhu Xin‐Guang, Lynch Jonathan P., LeBauer David S., Millar Andrew J., Stitt Mark, Long Stephen P.
Plant, Cell & Environment. 2016 39(5). p.1049
Use of 3D modeling to refine predictions of canopy light utilization: A comparative study on canopy photosynthesis models with different dimensions
Gu Shenghao, Wen Weiliang, Xu Tianjun, Lu Xianju, Yu Zetao, Guo Xinyu, Zhao Chunjiang
Frontiers in Plant Science. 2022 13
Amendment with controlled release urea increases leaf morpho‐physiological traits, grain yield and NUE in a double‐cropping rice system in southern China
Liu Chuang, Sun Yixiang, Wu Gang, Wang Xiao, Yuan Manman, Wang Jiabao, He Weizhu, Chen Fang, LeCocq Kate, Wang Li, Liu Yi
Journal of the Science of Food and Agriculture. 2023 103(4). p.1692
Exploring Relationships between Canopy Architecture, Light Distribution, and Photosynthesis in Contrasting Rice Genotypes Using 3D Canopy Reconstruction
Burgess Alexandra J., Retkute Renata, Herman Tiara, Murchie Erik H.
Frontiers in Plant Science. 2017 8
Encyclopedia of Sustainability Science and Technology (2018)
Murchie Erik H., Townsend Alexandra, Reynolds Matthew
Meeting the Global Food Demand of the Future by Engineering Crop Photosynthesis and Yield Potential
Long Stephen P., Marshall-Colon Amy, Zhu Xin-Guang
Cell. 2015 161(1). p.56
A field-based high-throughput method for acquiring canopy architecture using unmanned aerial vehicle images
Liu Fusang, Hu Pengcheng, Zheng Bangyou, Duan Tao, Zhu Binglin, Guo Yan
Agricultural and Forest Meteorology. 2021 296 p.108231
Photosynthesis: Structures, Mechanisms, and Applications (2017)
Zivcak Marek, Olsovska Katarina, Brestic Marian
Quantification of light interception within image-based 3-D reconstruction of sole and intercropped canopies over the entire growth season
Zhu Binglin, Liu Fusang, Xie Ziwen, Guo Yan, Li Baoguo, Ma Yuntao
Annals of Botany. 2020 126(4). p.701
Leaf Age and Position Effects on Quantum Yield and Photosynthetic Capacity in Hemp Crowns
Bauerle William L., McCullough Cole, Iversen Megan, Hazlett Michael
Plants. 2020 9(2). p.271
A cross‐scale analysis to understand and quantify the effects of photosynthetic enhancement on crop growth and yield across environments
Wu Alex, Brider Jason, Busch Florian A., Chen Min, Chenu Karine, Clarke Victoria C., Collins Brian, Ermakova Maria, Evans John R., Farquhar Graham D., Forster Britta, Furbank Robert T., Groszmann Michael, Hernandez‐Prieto Miguel A., Long Benedict M., Mclean Greg, Potgieter Andries, Price G. Dean, Sharwood Robert E., Stower Michael, van Oosterom Erik, von Caemmerer Susanne, Whitney Spencer M., Hammer Graeme L.
Plant, Cell & Environment. 2023 46(1). p.23
The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy
Burgess Alexandra J., Durand Maxime, Gibbs Jonathon A., Retkute Renata, Robson T. Matthew, Murchie Erik H.
Plant, Cell & Environment. 2021 44(11). p.3524
Rapid stomatal response to fluctuating light: an under-explored mechanism to improve drought tolerance in rice
Qu Mingnan, Hamdani Saber, Li Wenzhen, Wang Shimei, Tang Jiuyou, Chen Zhuo, Song Qingfeng, Li Ming, Zhao Honglong, Chang Tiangen, Chu Chengcai, Zhu Xinguang
Functional Plant Biology. 2016 43(8). p.727
Dynamic non‐photochemical quenching in plants: from molecular mechanism to productivity
Murchie Erik H., Ruban Alexander V.
The Plant Journal. 2020 101(4). p.885
Estimation of Maize Photosynthesis Traits Using Hyperspectral Lidar Backscattered Intensity
Bi Kaiyi, Niu Zheng, Xiao Shunfu, Bai Jie, Sun Gang, Wang Ji, Han Zeying, Gao Shuai
Remote Sensing. 2021 13(21). p.4203
3D plant model assessed by terrestrial LiDAR and hemispherical photographs: A useful tool for comparing light interception among oil palm progenies
Perez Raphaël P.A., Costes Evelyne, Théveny Frédéric, Griffon Sébastien, Caliman Jean-Pierre, Dauzat Jean
Agricultural and Forest Meteorology. 2018 249 p.250
Active Vision and Surface Reconstruction for 3D Plant Shoot Modelling
Gibbs Jonathon A., Pound Michael P., French Andrew P., Wells Darren M., Murchie Erik H., Pridmore Tony P.
IEEE/ACM Transactions on Computational Biology and Bioinformatics. 2020 17(6). p.1907
Canopy occupation volume as an indicator of canopy photosynthetic capacity
Liu Fusang, Song Qingfeng, Zhao Jinke, Mao Linxiong, Bu Hongyi, Hu Yong, Zhu Xin‐Guang
New Phytologist. 2021 232(2). p.941
Canopy light and nitrogen distributions are related to grain yield and nitrogen use efficiency in rice
Gu Junfei, Chen Ying, Zhang Hao, Li Zhikang, Zhou Qun, Yu Chao, Kong Xiangsheng, Liu Lijun, Wang Zhiqin, Yang Jianchang
Field Crops Research. 2017 206 p.74
Systems model‐guided rice yield improvements based on genes controlling source, sink, and flow
Li Pan, Chang Tiangen, Chang Shuoqi, Ouyang Xiang, Qu Mingnan, Song Qingfeng, Xiao Langtao, Xia Shitou, Deng Qiyun, Zhu Xin‐Guang
Journal of Integrative Plant Biology. 2018 60(12). p.1154
High‐throughput estimation of incident light, light interception and radiation‐use efficiency of thousands of plants in a phenotyping platform
Cabrera‐Bosquet Llorenç, Fournier Christian, Brichet Nicolas, Welcker Claude, Suard Benoît, Tardieu François
New Phytologist. 2016 212(1). p.269
Morphological Variation of Maize Cultivars in Response to Elevated Plant Densities
Gou Ling, Xue Jun, Qi Bingqin, Ma Buyi, Zhang Wangfeng
Agronomy Journal. 2017 109(4). p.1443
High Throughput Field Phenotyping for Plant Height Using UAV-Based RGB Imagery in Wheat Breeding Lines: Feasibility and Validation
Volpato Leonardo, Pinto Francisco, González-Pérez Lorena, Thompson Iyotirindranath Gilberto, Borém Aluízio, Reynolds Matthew, Gérard Bruno, Molero Gemma, Rodrigues Francelino Augusto
Frontiers in Plant Science. 2021 12
3dCAP-Wheat: An Open-Source Comprehensive Computational Framework Precisely Quantifies Wheat Foliar, Nonfoliar, and Canopy Photosynthesis
Chang Tian-Gen, Shi Zai, Zhao Honglong, Song Qingfeng, He Zhonghu, Van Rie Jeroen, Den Boer Bart, Galle Alexander, Zhu Xin-Guang
Plant Phenomics. 2022 2022
Perennial Biomass Crops for a Resource-Constrained World (2016)
Zhu X.-G., Chang T.-G., Song Q.-F., Finnan J., Barth S., Mårtensson L.-M., Jones M. B.
Enhancing direct-seeded rice yield prediction using UAV-derived features acquired during the reproductive phase
Yang Guodong, Li Yaxing, Yuan Shen, Zhou Changzai, Xiang Hongshun, Zhao Zhenqing, Wei Qiaorong, Chen Qingshan, Peng Shaobing, Xu Le
Precision Agriculture. 2024 25(2). p.1014
Wide variation in the suboptimal distribution of photosynthetic capacity in relation to light across genotypes of wheat
Salter William T, Merchant Andrew, Trethowan Richard M, Richards Richard A, Buckley Thomas N, Johnson Daniel
AoB PLANTS. 2020 12(5).
A patch-based approach to 3D plant shoot phenotyping
Pound Michael P., French Andrew P., Fozard John A., Murchie Erik H., Pridmore Tony P.
Machine Vision and Applications. 2016 27(5). p.767
Genetics of canopy architecture dynamics in photoperiod‐sensitive and photoperiod‐insensitive sorghum
Panelo Juan S., Bao Yin, Tang Lie, Schnable Patrick S., Salas‐Fernandez Maria G.
The Plant Phenome Journal. 2024 7(1).
Connecting Biochemical Photosynthesis Models with Crop Models to Support Crop Improvement
Wu Alex, Song Youhong, van Oosterom Erik J., Hammer Graeme L.
Frontiers in Plant Science. 2016 7
Image-based 3D canopy reconstruction to determine potential productivity in complex multi-species crop systems
Burgess Alexandra J., Retkute Renata, Pound Michael P., Mayes Sean, Murchie Erik H.
Annals of Botany. 2017  p.mcw242
Peculiarities of growth and development of soybean varieties as affected by components of growing technology
Григоренко С. В., Половинчук О. Ю., Маляренко О. А., Шевченко О. П.
Plant varieties studying and protection. 2019 15(1). p.59
Identification of climatic and physiological variables associated with rice (Oryza sativa L.) yield under tropical conditions
Quevedo Amaya Yeison Mauricio, Beltrán Medina Jose Isidro, Barragán Quijano Eduardo
Revista Facultad Nacional de Agronomía Medellín. 2019 72(1). p.8699
Measuring the dynamic photosynthome
Murchie Erik H, Kefauver Shawn, Araus Jose Luis, Muller Onno, Rascher Uwe, Flood Pádraic J, Lawson Tracy
Annals of Botany. 2018 122(2). p.207
Assessing diversity in canopy architecture, photosynthesis, and water‐use efficiency in a cowpea magic population
Digrado Anthony, Mitchell Noah G., Montes Christopher M., Dirvanskyte Paulina, Ainsworth Elizabeth A.
Food and Energy Security. 2020 9(4).
Upscaling seasonal phenological course of leaf dorsiventral reflectance in radiative transfer model
Lukeš Petr, Neuwirthová Eva, Lhotáková Zuzana, Janoutová Růžena, Albrechtová Jana
Remote Sensing of Environment. 2020 246 p.111862
Non-Photochemical Quenching and Energy Dissipation in Plants, Algae and Cyanobacteria (2014)
Murchie Erik H., Harbinson Jeremy
Crop Science (2019)
Murchie Erik H., Townsend Alexandra, Reynolds Matthew
Quality traits of maize inbred lines and hybrids with efficient photosynthetic functions
Radenovic C.N., Grodzinskij D.M., Filipovic M.R., Delic N.S., Srdic J.Z., Pavlov I.M.
Fiziologia rastenij i genetika. 2016 48(5). p.382
A New Era for Crop Improvement: From Model-Guided Rationale Design to Practical Engineering
Chu Chengcai
Molecular Plant. 2015 8(9). p.1299
Diurnal and Seasonal Variations of Photosynthetic Energy Conversion Efficiency of Field Grown Wheat
Song Qingfeng, Van Rie Jeroen, Den Boer Bart, Galle Alexander, Zhao Honglong, Chang Tiangen, He Zhonghu, Zhu Xin-Guang
Frontiers in Plant Science. 2022 13
Exotic alleles contribute to heat tolerance in wheat under field conditions
Molero Gemma, Coombes Benedict, Joynson Ryan, Pinto Francisco, Piñera-Chávez Francisco J., Rivera-Amado Carolina, Hall Anthony, Reynolds Matthew P.
Communications Biology. 2023 6(1).
Computer Vision - ECCV 2014 Workshops (2015)
Pound Michael P., French Andrew P., Murchie Erik H., Pridmore Tony P.
Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform
Marshall-Colon Amy, Long Stephen P., Allen Douglas K., Allen Gabrielle, Beard Daniel A., Benes Bedrich, von Caemmerer Susanne, Christensen A. J., Cox Donna J., Hart John C., Hirst Peter M., Kannan Kavya, Katz Daniel S., Lynch Jonathan P., Millar Andrew J., Panneerselvam Balaji, Price Nathan D., Prusinkiewicz Przemyslaw, Raila David, Shekar Rachel G., Shrivastava Stuti, Shukla Diwakar, Srinivasan Venkatraman, Stitt Mark, Turk Matthew J., Voit Eberhard O., Wang Yu, Yin Xinyou, Zhu Xin-Guang
Frontiers in Plant Science. 2017 8
Photosynthesis (2018)
Song Qingfeng, Zhu Xin-Guang
Decomposition analysis on soybean productivity increase under elevated CO2 using 3-D canopy model reveals synergestic effects of CO2 and light in photosynthesis
Song Qingfeng, Srinivasan Venkatraman, Long Steve P, Zhu Xin-Guang
Annals of Botany. 2020 126(4). p.601
Improving photosynthesis, plant productivity and abiotic stress tolerance – current trends and future perspectives
Nowicka Beatrycze, Ciura Joanna, Szymańska Renata, Kruk Jerzy
Journal of Plant Physiology. 2018 231 p.415
A ‘wiring diagram’ for source strength traits impacting wheat yield potential
Murchie Erik H, Reynolds Matthew, Slafer Gustavo A, Foulkes M John, Acevedo-Siaca Liana, McAusland Lorna, Sharwood Robert, Griffiths Simon, Flavell Richard B, Gwyn Jeff, Sawkins Mark, Carmo-Silva Elizabete, Lunn John
Journal of Experimental Botany. 2023 74(1). p.72
Photoprotective energy dissipation is greater in the lower, not the upper, regions of a rice canopy: a 3D analysis
Foo Chuan Ching, Burgess Alexandra J, Retkute Renata, Tree-Intong Pracha, Ruban Alexander V, Murchie Erik H, Lawson Tracy
Journal of Experimental Botany. 2020 71(22). p.7382
Bioengineering of Canopy Photosynthesis in Rice for Securing Global Food Security: A Critical Review
Vishwakarma Chandrapal, Krishna Gopinathan Kumar, Kapoor Riti Thapar, Mathur Komal, Lal Shambhu Krishan, Saini Ravi Prakash, Yadava Pranjal, Chinnusamy Viswanathan
Agronomy. 2023 13(2). p.489
A leaf‐level biochemical model simulating the introduction of C2 and C4 photosynthesis in C3 rice: gains, losses and metabolite fluxes
Bellasio Chandra, Farquhar Graham D.
New Phytologist. 2019 223(1). p.150
Optimizing Rubisco and its regulation for greater resource use efficiency
CARMO‐SILVA ELIZABETE, SCALES JOANNA C., MADGWICK PIPPA J., PARRY MARTIN A. J.
Plant, Cell & Environment. 2015 38(9). p.1817
The Impact of Stress Caused By Light Penetration and Agrotechnological Tools on Photosynthetic Behavior of Apple Trees
Laužikė Kristina, Sirgedaitė-Šėžienė Vaida, Uselis Nobertas, Samuolienė Giedrė
Scientific Reports. 2020 10(1).
Automated Recovery of Three-Dimensional Models of Plant Shoots from Multiple Color Images      
Pound Michael P., French Andrew P., Murchie Erik H., Pridmore Tony P.
Plant Physiology. 2014 166(4). p.1688
Nitrogen Uptake and Response to Radiation Distribution in the Canopy of High‐Yield Maize
Liu Guangzhou, Hou Peng, Xie Ruizhi, Ming Bo, Wang Keru, Liu Wanmao, Yang Yunshan, Xu Wenjuan, Chen Jianglu, Li Shaokun
Crop Science. 2019 59(3). p.1236
Light energy utilization and measurement methods in crop production
Lu Zhaohong, Gao Jing, Wang Qi, Ning Zili, Tan Xianming, Lei Yi, Zhang Jie, Zou Jiaqi, Wang Lingxuan, Yang Chenyao, Yang Wenyu, Yang Feng
Crop and Environment. 2024 3(2). p.91
Boll-leaf system gas exchange and its application in the analysis of cotton photosynthetic function
Chen Minzhi, Liang Fubin, Yan Yinhua, Wang Yuxuan, Zhang Yali, Tian Jingshan, Jiang Chuangdao, Zhang Wangfeng
Photosynthesis Research. 2021 150(1-3). p.251
Toward predicting photosynthetic efficiency and biomass gain in crop genotypes over a field season
Keller Beat, Zimmermann Lars, Rascher Uwe, Matsubara Shizue, Steier Angelina, Muller Onno
Plant Physiology. 2022 188(1). p.301
Dynamics of methane and carbon dioxide emissions in the reclaimed islands of Sundarban mangrove ecosystem, India
Das Nilanjan, Mondal Ayan, Mandal Sudipto
Austral Ecology. 2022 47(2). p.412
Suppression of starch synthesis in rice stems splays tiller angle due to gravitropic insensitivity but does not affect yield
Okamura Masaki, Hirose Tatsuro, Hashida Yoichi, Ohsugi Ryu, Aoki Naohiro
Functional Plant Biology. 2015 42(1). p.31
(2020)
Dwivedi Sangam L., Goldman Irwin, Ceccarelli Salvatore, Ortiz Rodomiro
PhenoTrack3D: an automatic high-throughput phenotyping pipeline to track maize organs over time
Daviet Benoit, Fernandez Romain, Cabrera-Bosquet Llorenç, Pradal Christophe, Fournier Christian
Plant Methods. 2022 18(1).
Canopy characteristics and light distribution in Sapindus mukorossi Gaertn. are influenced by crown architecture manipulation in the hilly terrain of Southeast China
Gao Yuan, Gao Shilun, Jia Liming, Dai Tengfei, Wei Xingbiao, Duan Jie, Liu Shiqi, Weng Xuehuang
Scientia Horticulturae. 2018 240 p.11
Genetics of barley tiller and leaf development
Shaaf Salar, Bretani Gianluca, Biswas Abhisek, Fontana Irene Maria, Rossini Laura
Journal of Integrative Plant Biology. 2019 61(3). p.226
What is the most prominent factor limiting photosynthesis in different layers of a greenhouse cucumber canopy?
Chen Tsu-Wei, Henke Michael, de Visser Pieter H. B., Buck-Sorlin Gerhard, Wiechers Dirk, Kahlen Katrin, Stützel Hartmut
Annals of Botany. 2014 114(4). p.677
Partially functional NARROW LEAF1 balances leaf photosynthesis and plant architecture for greater rice yield
Ouyang Xiang, Zhong Xiaoyu, Chang Shuoqi, Qian Qian, Zhang Yuzhu, Zhu Xinguang
Plant Physiology. 2022 189(2). p.772
Investigation of complex canopies with a functional–structural plant model as exemplified by leaf inclination effect on the functioning of pure and mixed stands of wheat during grain filling
Barillot Romain, Chambon Camille, Fournier Christian, Combes Didier, Pradal Christophe, Andrieu Bruno
Annals of Botany. 2019 123(4). p.727
Development of a Three-Dimensional Ray-Tracing Model of Sugarcane Canopy Photosynthesis and Its Application in Assessing Impacts of Varied Row Spacing
Wang Yu, Song Qingfeng, Jaiswal Deepak, P. de Souza Amanda, Long Stephen Patrick, Zhu Xin-Guang
BioEnergy Research. 2017 10(3). p.626
The impact of modifying photosystem antenna size on canopy photosynthetic efficiency—Development of a new canopy photosynthesis model scaling from metabolism to canopy level processes
Song Qingfeng, Wang Yu, Qu Mingnan, Ort Donald R., Zhu Xin‐Guang
Plant, Cell & Environment. 2017 40(12). p.2946
Three-dimensional plant architecture and sunlit–shaded patterns: a stochastic model of light dynamics in canopies
Retkute Renata, Townsend Alexandra J, Murchie Erik H, Jensen Oliver E, Preston Simon P
Annals of Botany. 2018 122(2). p.291
Harnessing Genetic Variation in Leaf Angle to Increase Productivity of Sorghum bicolor
Truong Sandra K, McCormick Ryan F, Rooney William L, Mullet John E
Genetics. 2015 201(3). p.1229
The basic helix-loop-helix transcription factor OsBLR1 regulates leaf angle in rice via brassinosteroid signalling
Wang Kun, Li Meng-qi, Chang Yan-peng, Zhang Bo, Zhao Quan-zhi, Zhao Wen-li
Plant Molecular Biology. 2020 102(6). p.589
Heterogeneity of photosynthesis within leaves is associated with alteration of leaf structural features and leaf N content per leaf area in rice
Xiong Dongliang, Yu Tingting, Liu Xi, Li Yong, Peng Shaobing, Huang Jianliang
Functional Plant Biology. 2015 42(7). p.687
Effect of two alleles of Tiller Angle Control 1 on grain yield and dry matter production in rice
Okamura Masaki, Aoki Naohiro
Field Crops Research. 2024 309 p.109325
Indicators of water use efficiency across diverse agroecosystems and spatiotemporal scales
Hoover David L., Abendroth Lori J., Browning Dawn M., Saha Amartya, Snyder Keirith, Wagle Pradeep, Witthaus Lindsey, Baffaut Claire, Biederman Joel A., Bosch David D., Bracho Rosvel, Busch Dennis, Clark Patrick, Ellsworth Patrick, Fay Philip A., Flerchinger Gerald, Kearney Sean, Levers Lucia, Saliendra Nicanor, Schmer Marty, Schomberg Harry, Scott Russell L.
Science of The Total Environment. 2023 864 p.160992
Potential metabolic mechanisms for inhibited chloroplast nitrogen assimilation under high CO2
Zhao Hong-Long, Chang Tian-Gen, Xiao Yi, Zhu Xin-Guang
Plant Physiology. 2021 187(3). p.1812
The Role of Spatial Averaging Scale in Leaf‐To‐Canopy Scaling of Non‐Linear Processes in Homogeneous Canopies
Kent Eric R., Bailey Brian N.
Journal of Geophysical Research: Biogeosciences. 2021 126(7).
Mathematical Modeling of Photosynthesis and Analysis of Plant Productivity
Sukhova E. M., Vodeneev V. A., Sukhov V. S.
Biochemistry (Moscow), Supplement Series A: Membrane and Cell Biology. 2021 15(1). p.52
The influence of leaf anatomy on the internal light environment and photosynthetic electron transport rate: exploration with a new leaf ray tracing model
Xiao Yi, Tholen Danny, Zhu Xin-Guang
Journal of Experimental Botany. 2016 67(21). p.6021
Roles of canopy architecture and nitrogen distribution in the better performance of an aerobic than a lowland rice cultivar under water deficit
Ouyang Wenjing, Yin Xinyou, Yang Jianchang, Struik Paul C.
Field Crops Research. 2021 271 p.108257
Does canopy angle influence radiation use efficiency of sugar beet?
Tillier Lucy C., Murchie Erik H., Sparkes Debbie L.
Field Crops Research. 2023 293 p.108841
Response Characteristics of Photosynthetic Productivity to the Canopy Spatial Distribution Pattern of Larix kaempferi
Wu Chunyan, Chen Dongsheng, Xia Guowei, Sun Xiaomei, Zhang Shougong
Forests. 2023 14(6). p.1171
Light Spatial Distribution in the Canopy and Crop Development in Cotton
Zhi Xiaoyu, Han Yingchun, Mao Shuchun, Wang Guoping, Feng Lu, Yang Beifang, Fan Zhengyi, Du Wenli, Lu Jianhua, Li Yabing, Reigosa Manuel
PLoS ONE. 2014 9(11). p.e113409
High temperature and vapor pressure deficit aggravate architectural effects but ameliorate non-architectural effects of salinity on dry mass production of tomato
Chen Tsu-Wei, Nguyen Thi M. N., Kahlen Katrin, Stützel Hartmut
Frontiers in Plant Science. 2015 6
Photoprotection as a Trait for Rice Yield Improvement: Status and Prospects
Murchie Erik H., Ali Asgar, Herman Tiara
Rice. 2015 8(1).
From leaf to multiscale models of photosynthesis: applications and challenges for crop improvement
Stirbet Alexandrina, Guo Ya, Lazár Dušan, Govindjee Govindjee
Photosynthesis Research. 2024
Genome-wide association studies reveal that members of bHLH subfamily 16 share a conserved function in regulating flag leaf angle in rice (Oryza sativa)
Dong Haijiao, Zhao Hu, Li Shuangle, Han Zhongmin, Hu Gang, Liu Chang, Yang Gaiyu, Wang Gongwei, Xie Weibo, Xing Yongzhong, Olsen Kenneth M.
PLOS Genetics. 2018 14(4). p.e1007323
Effect of the L-D alleles on leaf morphology, canopy structure and photosynthetic productivity in upland cotton (Gossypium hirsutum L.)
JIANG Hui, GAO Ming-wei, CHEN Ying, ZHANG Chao, WANG Jia-bao, CHAI Qi-chao, WANG Yong-cui, ZHENG Jin-xiu, WANG Xiu-li, ZHAO Jun-sheng
Journal of Integrative Agriculture. 2023 22(1). p.108
Enhancing leaf photosynthesis from altered chlorophyll content requires optimal partitioning of nitrogen
Zhou Zhenxiang, Struik Paul C., Gu Junfei, van der Putten Peter E.L., Wang Zhiqin, Yin Xinyou, Yang Jianchang
Crop and Environment. 2023 2(1). p.24
Digital Ecosystem for Innovation in Agriculture (2023)
Celis Jorge, Xiao Xiangming, Basara Jeffrey, Wagle Pradeep, McCarthy Heather
Photosynthesis (2024)
Song Qingfeng, Zhu Xin-Guang
Interactions between nitrogen nutrition, canopy architecture and photosynthesis in rice, assessed using high-resolution 3D reconstruction
Burgess Alexandra J, Herman Tiara, Ali Asgar, Murchie Erik H, Zhu Xin-Guang
in silico Plants. 2021 3(1).
The 4-Dimensional Plant: Effects of Wind-Induced Canopy Movement on Light Fluctuations and Photosynthesis
Burgess Alexandra J., Retkute Renata, Preston Simon P., Jensen Oliver E., Pound Michael P., Pridmore Tony P., Murchie Erik H.
Frontiers in Plant Science. 2016 7
Analyzing the Long-Term Phenological Trends of Salt Marsh Ecosystem across Coastal LOUISIANA
Ghosh Shuvankar, Mishra Deepak
Remote Sensing. 2017 9(12). p.1340
Casting light on the architecture of crop yield
Murchie Erik H., Burgess Alexandra J.
Crop and Environment. 2022 1(1). p.74

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