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Australian Journal of Chemistry Australian Journal of Chemistry Society
An international journal for chemical science
Australian Journal of Chemistry

Australian Journal of Chemistry

Volume 73 Number 8 2020

PhysChem 2019

CH19478New Perspectives on Photosystem II Reaction Centres

Jeremy Hall, Rafael Picorel, Nicholas Cox, Robin Purchase and Elmars Krausz 0000-0002-8536-6890
pp. 669-676
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Studies of isolated reaction centre preparations of PS II have been pivotal in the development of models of both the coupling between its pigments and the process of charge separation. Several key puzzles remain in our understanding of these important systems. We apply new and powerful optical techniques (CPL and MCPL) and, by means of an exciton analysis, point to key new ideas.

CH19571‘Live and Large’: Super-Resolution Optical Fluctuation Imaging (SOFI) and Expansion Microscopy (ExM) of Microtubule Remodelling by Rabies Virus P Protein

Ashley M. Rozario, Fabian Zwettler, Sam Duwé, Riley B. Hargreaves, Aaron Brice, Peter Dedecker, Markus Sauer, Gregory W. Moseley, Donna R. Whelan and Toby D. M. Bell 0000-0002-4570-5595
pp. 686-692
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Super-resolution microscopy continues to develop: super-resolution optical fluctuation imaging (SOFI) is well suited for application in live cells and expansion microscopy (ExM) allows for imaging sub-diffraction detail with conventional microscopes. Here, they are utilised along with single molecule localisation microscopy (dSTORM) to visualise microtubule remodelling by rabies virus P proteins.

CH19428Evidence For a Water-Stabilised Ion Radical Complex: Photoelectron Spectroscopy and Ab Initio Calculations

Timothy R. Corkish, Christian T. Haakansson, Allan J. McKinley and Duncan A. Wild
pp. 693-698
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The formation of complexes between water molecules and radicals are important in dictating the processes of a number of atmospheric reactions. Here, a combination of mass spectrometry, phototelectron spectroscopy, and ab initio calculations are used to assign the form of an experimental I…H2O…CH3CH2 gas-phase radical ion complex.

CH19555Electron Transfer in a Naphthalene Diimide System Studied by Single-Molecule Delayed Fluorescence

Rosalind P. Cox 0000-0003-1969-923X, Saman Sandanayake, Steven J. Langford 0000-0001-7149-996X and Toby D. M. Bell 0000-0002-4570-5595
pp. 699-704
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Delayed fluorescence allows detection of single molecules of a naphthalene diimide–tertiary amine system with efficient electron transfer operative. Calculation of forward and reverse rate constants for individual molecules reveals contributions from both coupling and driving force to the distribution of behaviour from molecule to molecule when embedded in a polymer film.

CH19606Barrierless Reactions of Three Benzonitrile Radical Cations with Ethylene

Oisin J. Shiels, P. D. Kelly, Stephen J. Blanksby, Gabriel da Silva and Adam J. Trevitt 0000-0003-2525-3162
pp. 705-713
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A combination of ion-trap mass spectrometry and gas-phase reactions are used to study radical ions derived from protonated cyanobenzene reacting with ethylene (the archetypal olefin). Molecular weight growth is observed, from barrierless entrance channels – thus, these are viable reactions in the cold environment of space.

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Rotational dynamics of molecules is surprisingly complicated even in apparently simple liquids. We present an analysis of the rotational dynamics of hydrogen sulfide and compare it with that of water. The two liquids have similar molecular geometries but different hydrogen bonding properties. Neither liquid follows the standard Debye model that is traditionally used in the NMR literature to describe molecular reorientation.

CH19448Diatomic Rovibronic Transitions as Potential Probes for Proton-to-Electron Mass Ratio Across Cosmological Time

Anna-Maree Syme, Adam Mousley, Maria Cunningham and Laura K. McKemmish
pp. 743-756
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To improve constraints on the variation of the proton-to-electron mass ratio and provide better guidance to theories of new physics, new molecular probes will be useful. From our investigation, we consider criteria to screen potential astrophysical molecules as probes. For rovibronic transitions in diatomic molecules, we find that low-lying electronic states allow for enhanced transitions.

CH19517Electronic Wavefunction Tiles

Yu Liu, Terry J. Frankcombe and Timothy W. Schmidt
pp. 757-766
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We review the pre-quantum theories of electronic structure of Lewis and Langmuir, and how this relates to the post-quantum double-quartet theory of Linnett. Linnett’s ideas are put on a firm theoretical footing through the emergence of the wavefunction tile: the 3N-dimensional repeating structure of the N-electron wavefunction.

CH19557A Detailed Classification of Three-Centre Two-Electron Bonds

Sharon Priya Gnanasekar and Elangannan Arunan 0000-0001-9669-4307
pp. 767-774
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Atoms in molecules (AIM) and natural bond orbital (NBO) analyses have been used to investigate three-centre two-electron bonds and classify them based on their arrangements into either V, L, Δ, Y, T, or I types. These differences in their arrangements lead to differences in their properties.

CH19469The Case for Methyl Group Precession Accompanying Torsional Motion

Jason R. Gascooke and Warren D. Lawrance
pp. 775-786
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The physical behaviour of the methyl group during internal rotation (torsion) is explored. Precession of the methyl group is shown to give rise to a number of the constants required to fit experimental rotational line data. Quantum chemistry calculations of the optimised molecular structures at key torsional angles provide further evidence that methyl precession occurs.

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The molecular structure of morpholine borane complex, a candidate for chemical hydrogen storage, has been studied in the solid state and gas phase using single-crystal X-ray diffraction and gas electron diffraction, and its thermochemistry studied computationally. Evolution of hydrogen from the complex is calculated to be close to thermoneutral and spontaneous, thus introducing a new amine borane complex with potential for future on-board hydrogen generation.

CH19502Analysis of Nanoconfined Protein Dielectric Signals Using Charged Amino Acid Network Models

Lorenza Pacini, Laetitia Bourgeat, Anatoli Serghei and Claire Lesieur 0000-0001-9594-014X
pp. 803-812
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The unfolding of the cholera toxin B pentamer is measured by broadband dielectric spectroscopy in nanoconfined conditions after a 3 h treatment at 80°C, exhibiting three conformations with distinct molecular dynamics. Electrostatic network-based models allow the attribution of thermally disturbed toxin interfaces that underlie the distinct dynamics of the three conformations.

CH19453Probing Intramolecular Interaction of Stereoisomers Using Computational Spectroscopy

Feng Wang, Shawkat Islam and Frederick Backler
pp. 813-821
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Molecular spectroscopy is a branch of quantum mechanics. Spectroscopic analysis depends on structural information at the molecule level. The earlier experimental measurements of IR spectra of ferrocene (Fc) could neither identify the fingerprints of the Fc conformer nor explain why the gas phase and solution IR spectra have different stereoisomer fingerprints without theoretical support. This article indicates that contemporary molecular spectroscopy needs guidance as well as support from computational spectroscopy.

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